RNA–Protein interactions for RNA: ENST00000612563.1

GGNBP2-211, Transcript of gametogenetin binding protein 2, humanhuman

TSL 2

Gene GGNBP2, Length 851 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGNBP2-211ENST00000612563 AEBP2Q6ZN18 517 aaPredicted RBP28.18■■■□□ 2.1
GGNBP2-211ENST00000612563 CHIC1Q5VXU3 224 aa27.08■■□□□ 1.93
GGNBP2-211ENST00000612563 NISCHQ9Y2I1 1504 aa25.55■■□□□ 1.68
GGNBP2-211ENST00000612563 SENP3Q9H4L4 574 aaPredicted RBP23.94■■□□□ 1.42
GGNBP2-211ENST00000612563 PHF23Q9BUL5 403 aaPredicted RBP23.79■■□□□ 1.4
GGNBP2-211ENST00000612563 ABCC9O60706 1549 aa23.23■■□□□ 1.31
GGNBP2-211ENST00000612563 CCDC180Q9P1Z9 1646 aa22.96■■□□□ 1.27
GGNBP2-211ENST00000612563 FOXD1Q16676 465 aa22.3■■□□□ 1.16
GGNBP2-211ENST00000612563 DNAJC5BQ9UF47 199 aa22.04■■□□□ 1.12
GGNBP2-211ENST00000612563 RB1CC1Q8TDY2 1594 aa21.97■■□□□ 1.11
GGNBP2-211ENST00000612563 PLPPR3Q6T4P5 718 aa21.79■■□□□ 1.08
GGNBP2-211ENST00000612563 NACADO15069 1562 aa21.78■■□□□ 1.08
GGNBP2-211ENST00000612563 DCAF8L2P0C7V8 631 aa21.74■■□□□ 1.07
GGNBP2-211ENST00000612563 PABPN1Q86U42 306 aaKnown RBP eCLIP21.64■■□□□ 1.05
GGNBP2-211ENST00000612563 UNC13AQ9UPW8 1703 aa21.49■■□□□ 1.03
GGNBP2-211ENST00000612563 MYO15BQ96JP2 1530 aa21.39■■□□□ 1.02
GGNBP2-211ENST00000612563 BICRAQ9NZM4 1560 aa21.38■■□□□ 1.01
GGNBP2-211ENST00000612563 PPP6R1Q9UPN7 881 aa21.14■□□□□ 0.97
GGNBP2-211ENST00000612563 ZCCHC6Q5VYS8 1495 aaKnown RBP21.11■□□□□ 0.97
GGNBP2-211ENST00000612563 ADRA2BP18089 450 aa21.1■□□□□ 0.97
GGNBP2-211ENST00000612563 DCAF1Q9Y4B6 1507 aa21.06■□□□□ 0.96
GGNBP2-211ENST00000612563 SHROOM4Q9ULL8 1493 aa20.99■□□□□ 0.95
GGNBP2-211ENST00000612563 SCRIBQ14160 1630 aa20.95■□□□□ 0.94
GGNBP2-211ENST00000612563 CC2D2AQ9P2K1 1620 aa20.95■□□□□ 0.94
GGNBP2-211ENST00000612563 PIAS4Q8N2W9 510 aaPredicted RBP20.93■□□□□ 0.94
GGNBP2-211ENST00000612563 CECR2Q9BXF3 1484 aa20.93■□□□□ 0.94
GGNBP2-211ENST00000612563 EIF4G1Q04637 1599 aaKnown RBP20.85■□□□□ 0.93
GGNBP2-211ENST00000612563 MSH5O43196 834 aa20.7■□□□□ 0.9
GGNBP2-211ENST00000612563 DNAJC5Q9H3Z4 198 aa20.34■□□□□ 0.85
GGNBP2-211ENST00000612563 NCAPD3P42695 1498 aa20.14■□□□□ 0.81
GGNBP2-211ENST00000612563 CUX2O14529 1486 aa20.05■□□□□ 0.8
GGNBP2-211ENST00000612563 ATAD2BQ9ULI0 1458 aa20.05■□□□□ 0.8
GGNBP2-211ENST00000612563 ERCC6Q03468 1493 aa20.04■□□□□ 0.8
GGNBP2-211ENST00000612563 SMARCA4P51532 1647 aa19.96■□□□□ 0.79
GGNBP2-211ENST00000612563 SMARCA2P51531 1590 aa19.95■□□□□ 0.78
GGNBP2-211ENST00000612563 HMGXB3Q12766 1538 aa19.93■□□□□ 0.78
GGNBP2-211ENST00000612563 NESP48681 1621 aa19.91■□□□□ 0.78
GGNBP2-211ENST00000612563 BAZ1BQ9UIG0 1483 aaKnown RBP19.83■□□□□ 0.76
GGNBP2-211ENST00000612563 BAZ1AQ9NRL2 1556 aaPredicted RBP19.82■□□□□ 0.76
GGNBP2-211ENST00000612563 PEG3Q9GZU2 1588 aa19.75■□□□□ 0.75
GGNBP2-211ENST00000612563 MROH2BQ7Z745 1585 aa19.7■□□□□ 0.74
GGNBP2-211ENST00000612563 THOC2Q8NI27 1593 aaKnown RBP19.69■□□□□ 0.74
GGNBP2-211ENST00000612563 LAMC3Q9Y6N6 1575 aa19.68■□□□□ 0.74
GGNBP2-211ENST00000612563 POTEDQ86YR6 584 aa19.63■□□□□ 0.73
GGNBP2-211ENST00000612563 KIF21AQ7Z4S6 1674 aa19.61■□□□□ 0.73
GGNBP2-211ENST00000612563 PDS5BQ9NTI5 1447 aa19.59■□□□□ 0.73
GGNBP2-211ENST00000612563 CADPSQ9ULU8 1353 aa19.53■□□□□ 0.72
GGNBP2-211ENST00000612563 WIZO95785 1651 aa19.46■□□□□ 0.71
GGNBP2-211ENST00000612563 MRC2Q9UBG0 1479 aa19.43■□□□□ 0.7
GGNBP2-211ENST00000612563 WDR62O43379 1518 aa19.38■□□□□ 0.69
GGNBP2-211ENST00000612563 TRIM41Q8WV44 630 aa19.38■□□□□ 0.69
GGNBP2-211ENST00000612563 CEP164Q9UPV0 1460 aa19.31■□□□□ 0.68
GGNBP2-211ENST00000612563 FANCD2Q9BXW9 1451 aa19.29■□□□□ 0.68
GGNBP2-211ENST00000612563 MAPK8IP2Q13387 824 aaPredicted RBP19.28■□□□□ 0.68
GGNBP2-211ENST00000612563 SCAF1Q9H7N4 1312 aaKnown RBP19.25■□□□□ 0.67
GGNBP2-211ENST00000612563 CFTRP13569 1480 aa19.25■□□□□ 0.67
GGNBP2-211ENST00000612563 RSF1Q96T23 1441 aaPredicted RBP19.23■□□□□ 0.67
GGNBP2-211ENST00000612563 PPP4R3CPQ6ZMV5 832 aa19.17■□□□□ 0.66
GGNBP2-211ENST00000612563 OSCARQ8IYS5 282 aa19.17■□□□□ 0.66
GGNBP2-211ENST00000612563 TOP2AP11388 1531 aaKnown RBP19.16■□□□□ 0.66
GGNBP2-211ENST00000612563 URB2Q14146 1524 aaKnown RBP19.15■□□□□ 0.66
GGNBP2-211ENST00000612563 DMRT2Q9Y5R5 561 aa19.05■□□□□ 0.64
GGNBP2-211ENST00000612563 CCDC88BA6NC98 1476 aa19■□□□□ 0.63
GGNBP2-211ENST00000612563 PRDM2Q13029 1718 aa18.98■□□□□ 0.63
GGNBP2-211ENST00000612563 ZNF608Q9ULD9 1512 aaPredicted RBP18.96■□□□□ 0.63
GGNBP2-211ENST00000612563 IFT140Q96RY7 1462 aa18.93■□□□□ 0.62
GGNBP2-211ENST00000612563 TOPBP1Q92547 1522 aa18.9■□□□□ 0.62
GGNBP2-211ENST00000612563 RIMBP3CA6NJZ7 1639 aa18.9■□□□□ 0.62
GGNBP2-211ENST00000612563 RIMBP3BA6NNM3 1639 aa18.9■□□□□ 0.62
GGNBP2-211ENST00000612563 RIMBP3Q9UFD9 1639 aa18.9■□□□□ 0.62
GGNBP2-211ENST00000612563 ABCC8Q09428 1581 aa18.82■□□□□ 0.6
GGNBP2-211ENST00000612563 ARHGEF11O15085 1522 aa18.82■□□□□ 0.6
GGNBP2-211ENST00000612563 EIF4G3O43432 1585 aaKnown RBP18.8■□□□□ 0.6
GGNBP2-211ENST00000612563 DNMBPQ6XZF7 1577 aa18.8■□□□□ 0.6
GGNBP2-211ENST00000612563 AQRO60306 1485 aaKnown RBP eCLIP18.78■□□□□ 0.6
GGNBP2-211ENST00000612563 TARBP1Q13395 1621 aaKnown RBP18.75■□□□□ 0.59
GGNBP2-211ENST00000612563 CYB5RLQ6IPT4 315 aa18.75■□□□□ 0.59
GGNBP2-211ENST00000612563 FBLN2P98095 1184 aa18.71■□□□□ 0.59
GGNBP2-211ENST00000612563 CNKSR2Q8WXI2 1034 aa18.71■□□□□ 0.59
GGNBP2-211ENST00000612563 CHD1O14646 1710 aa18.71■□□□□ 0.59
GGNBP2-211ENST00000612563 POLA1P09884 1462 aaPredicted RBP18.7■□□□□ 0.58
GGNBP2-211ENST00000612563 RAD54L2Q9Y4B4 1467 aa18.67■□□□□ 0.58
GGNBP2-211ENST00000612563 TDRD9Q8NDG6 1382 aaKnown RBP18.65■□□□□ 0.58
GGNBP2-211ENST00000612563 SOGA1O94964 1423 aa18.64■□□□□ 0.57
GGNBP2-211ENST00000612563 ARAP1Q96P48 1450 aa18.63■□□□□ 0.57
GGNBP2-211ENST00000612563 TRHP20396 242 aaPredicted RBP18.6■□□□□ 0.57
GGNBP2-211ENST00000612563 FGD5Q6ZNL6 1462 aa18.56■□□□□ 0.56
GGNBP2-211ENST00000612563 SNAPC4Q5SXM2 1469 aa18.54■□□□□ 0.56
GGNBP2-211ENST00000612563 CHMP7Q8WUX9 453 aaPredicted RBP18.53■□□□□ 0.56
GGNBP2-211ENST00000612563 NCBP3Q53F19 620 aaKnown RBP18.52■□□□□ 0.56
GGNBP2-211ENST00000612563 CUX1P39880 1505 aa18.52■□□□□ 0.56
GGNBP2-211ENST00000612563 CLASP1Q7Z460 1538 aa18.49■□□□□ 0.55
GGNBP2-211ENST00000612563 HOXD11P31277 338 aaPredicted RBP18.48■□□□□ 0.55
GGNBP2-211ENST00000612563 WDR97A6NE52 1622 aa18.48■□□□□ 0.55
GGNBP2-211ENST00000612563 GRIN2BQ13224 1484 aa18.46■□□□□ 0.55
GGNBP2-211ENST00000612563 MAGI1Q96QZ7 1491 aaPredicted RBP18.46■□□□□ 0.55
GGNBP2-211ENST00000612563 SYNJ1O43426 1573 aa18.44■□□□□ 0.54
GGNBP2-211ENST00000612563 RNF216Q9NWF9 866 aaPredicted RBP18.44■□□□□ 0.54
GGNBP2-211ENST00000612563 SYNJ2O15056 1496 aa18.43■□□□□ 0.54
GGNBP2-211ENST00000612563 GAPVD1Q14C86 1478 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms