RNA–Protein interactions for RNA: ENST00000611559.1

AC027088.4-201, humanhuman

BASIC

Gene AC027088.4, Length 1,947 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC027088.4-201ENST00000611559 AEBP2Q6ZN18 517 aaPredicted RBP15.2■□□□□ 0.02
AC027088.4-201ENST00000611559 CHIC1Q5VXU3 224 aa15.17■□□□□ 0.02
AC027088.4-201ENST00000611559 NISCHQ9Y2I1 1504 aa14.45□□□□□ -0.1
AC027088.4-201ENST00000611559 PHF23Q9BUL5 403 aaPredicted RBP13.47□□□□□ -0.25
AC027088.4-201ENST00000611559 CCDC180Q9P1Z9 1646 aa12.85□□□□□ -0.35
AC027088.4-201ENST00000611559 SENP3Q9H4L4 574 aaPredicted RBP12.7□□□□□ -0.38
AC027088.4-201ENST00000611559 ABCC9O60706 1549 aa12.55□□□□□ -0.4
AC027088.4-201ENST00000611559 PLPPR3Q6T4P5 718 aa12.48□□□□□ -0.41
AC027088.4-201ENST00000611559 RB1CC1Q8TDY2 1594 aa12.1□□□□□ -0.47
AC027088.4-201ENST00000611559 NACADO15069 1562 aa12.1□□□□□ -0.47
AC027088.4-201ENST00000611559 MYO15BQ96JP2 1530 aa12.06□□□□□ -0.48
AC027088.4-201ENST00000611559 ZCCHC6Q5VYS8 1495 aaKnown RBP12.04□□□□□ -0.48
AC027088.4-201ENST00000611559 DCAF8L2P0C7V8 631 aa12.01□□□□□ -0.49
AC027088.4-201ENST00000611559 DCAF1Q9Y4B6 1507 aa11.99□□□□□ -0.49
AC027088.4-201ENST00000611559 FOXD1Q16676 465 aa11.82□□□□□ -0.52
AC027088.4-201ENST00000611559 ADRA2BP18089 450 aa11.8□□□□□ -0.52
AC027088.4-201ENST00000611559 PPP6R1Q9UPN7 881 aa11.76□□□□□ -0.53
AC027088.4-201ENST00000611559 UNC13AQ9UPW8 1703 aa11.75□□□□□ -0.53
AC027088.4-201ENST00000611559 PABPN1Q86U42 306 aaKnown RBP eCLIP11.71□□□□□ -0.53
AC027088.4-201ENST00000611559 BICRAQ9NZM4 1560 aa11.71□□□□□ -0.53
AC027088.4-201ENST00000611559 SCRIBQ14160 1630 aa11.69□□□□□ -0.54
AC027088.4-201ENST00000611559 SHROOM4Q9ULL8 1493 aa11.67□□□□□ -0.54
AC027088.4-201ENST00000611559 DNAJC5BQ9UF47 199 aa11.5□□□□□ -0.57
AC027088.4-201ENST00000611559 EIF4G1Q04637 1599 aaKnown RBP11.41□□□□□ -0.58
AC027088.4-201ENST00000611559 KCNA4P22459 653 aa11.37□□□□□ -0.59
AC027088.4-201ENST00000611559 CC2D2AQ9P2K1 1620 aa11.35□□□□□ -0.59
AC027088.4-201ENST00000611559 CECR2Q9BXF3 1484 aa11.3□□□□□ -0.6
AC027088.4-201ENST00000611559 BAZ1AQ9NRL2 1556 aaPredicted RBP11.21□□□□□ -0.61
AC027088.4-201ENST00000611559 PIAS4Q8N2W9 510 aaPredicted RBP11.21□□□□□ -0.62
AC027088.4-201ENST00000611559 SMARCA4P51532 1647 aa11.2□□□□□ -0.62
AC027088.4-201ENST00000611559 NCAPD3P42695 1498 aa11.16□□□□□ -0.62
AC027088.4-201ENST00000611559 ATAD2BQ9ULI0 1458 aa11.15□□□□□ -0.62
AC027088.4-201ENST00000611559 SMARCA2P51531 1590 aa11.15□□□□□ -0.62
AC027088.4-201ENST00000611559 PEG3Q9GZU2 1588 aa11.12□□□□□ -0.63
AC027088.4-201ENST00000611559 MROH2BQ7Z745 1585 aa11.11□□□□□ -0.63
AC027088.4-201ENST00000611559 HMGXB3Q12766 1538 aa11.11□□□□□ -0.63
AC027088.4-201ENST00000611559 PPP4R3CPQ6ZMV5 832 aa11.08□□□□□ -0.64
AC027088.4-201ENST00000611559 EHMT2Q96KQ7 1210 aa11.07□□□□□ -0.64
AC027088.4-201ENST00000611559 BAZ1BQ9UIG0 1483 aaKnown RBP11.06□□□□□ -0.64
AC027088.4-201ENST00000611559 RSF1Q96T23 1441 aaPredicted RBP11□□□□□ -0.65
AC027088.4-201ENST00000611559 WIZO95785 1651 aa10.97□□□□□ -0.65
AC027088.4-201ENST00000611559 TOP2AP11388 1531 aaKnown RBP10.9□□□□□ -0.66
AC027088.4-201ENST00000611559 LAMC3Q9Y6N6 1575 aa10.86□□□□□ -0.67
AC027088.4-201ENST00000611559 NESP48681 1621 aa10.85□□□□□ -0.67
AC027088.4-201ENST00000611559 ERCC6Q03468 1493 aa10.84□□□□□ -0.67
AC027088.4-201ENST00000611559 SLC4A1APQ9BWU0 796 aaKnown RBP10.84□□□□□ -0.67
AC027088.4-201ENST00000611559 CADPSQ9ULU8 1353 aa10.83□□□□□ -0.68
AC027088.4-201ENST00000611559 NCBP3Q53F19 620 aaKnown RBP10.83□□□□□ -0.68
AC027088.4-201ENST00000611559 PDS5BQ9NTI5 1447 aa10.8□□□□□ -0.68
AC027088.4-201ENST00000611559 NPM3O75607 178 aaKnown RBP10.79□□□□□ -0.68
AC027088.4-201ENST00000611559 CSRNP3Q8WYN3 585 aa10.77□□□□□ -0.69
AC027088.4-201ENST00000611559 CFTRP13569 1480 aa10.77□□□□□ -0.69
AC027088.4-201ENST00000611559 CCDC88BA6NC98 1476 aa10.75□□□□□ -0.69
AC027088.4-201ENST00000611559 CUX2O14529 1486 aa10.75□□□□□ -0.69
AC027088.4-201ENST00000611559 KIF21AQ7Z4S6 1674 aa10.7□□□□□ -0.7
AC027088.4-201ENST00000611559 THOC2Q8NI27 1593 aaKnown RBP10.7□□□□□ -0.7
AC027088.4-201ENST00000611559 FANCD2Q9BXW9 1451 aa10.7□□□□□ -0.7
AC027088.4-201ENST00000611559 CEP164Q9UPV0 1460 aa10.69□□□□□ -0.7
AC027088.4-201ENST00000611559 MRC2Q9UBG0 1479 aa10.68□□□□□ -0.7
AC027088.4-201ENST00000611559 SUPT5HO00267 1087 aaKnown RBP10.68□□□□□ -0.7
AC027088.4-201ENST00000611559 CNKSR2Q8WXI2 1034 aa10.64□□□□□ -0.71
AC027088.4-201ENST00000611559 PRDM2Q13029 1718 aa10.64□□□□□ -0.71
AC027088.4-201ENST00000611559 WDR62O43379 1518 aa10.64□□□□□ -0.71
AC027088.4-201ENST00000611559 MSH5O43196 834 aa10.63□□□□□ -0.71
AC027088.4-201ENST00000611559 SCAF1Q9H7N4 1312 aaKnown RBP10.6□□□□□ -0.71
AC027088.4-201ENST00000611559 URB2Q14146 1524 aaKnown RBP10.58□□□□□ -0.72
AC027088.4-201ENST00000611559 ABCC8Q09428 1581 aa10.56□□□□□ -0.72
AC027088.4-201ENST00000611559 MAPK8IP2Q13387 824 aaPredicted RBP10.55□□□□□ -0.72
AC027088.4-201ENST00000611559 TOPBP1Q92547 1522 aa10.52□□□□□ -0.73
AC027088.4-201ENST00000611559 DNMBPQ6XZF7 1577 aa10.51□□□□□ -0.73
AC027088.4-201ENST00000611559 ZBTB22O15209 634 aa10.51□□□□□ -0.73
AC027088.4-201ENST00000611559 IFT140Q96RY7 1462 aa10.48□□□□□ -0.73
AC027088.4-201ENST00000611559 CUX1P39880 1505 aa10.43□□□□□ -0.74
AC027088.4-201ENST00000611559 POLA1P09884 1462 aaPredicted RBP10.43□□□□□ -0.74
AC027088.4-201ENST00000611559 FGD5Q6ZNL6 1462 aa10.4□□□□□ -0.74
AC027088.4-201ENST00000611559 TARBP1Q13395 1621 aaKnown RBP10.4□□□□□ -0.74
AC027088.4-201ENST00000611559 DNAJC5Q9H3Z4 198 aa10.4□□□□□ -0.74
AC027088.4-201ENST00000611559 SOGA1O94964 1423 aa10.39□□□□□ -0.75
AC027088.4-201ENST00000611559 ZNF608Q9ULD9 1512 aaPredicted RBP10.39□□□□□ -0.75
AC027088.4-201ENST00000611559 WRNQ14191 1432 aaPredicted RBP eCLIP10.38□□□□□ -0.75
AC027088.4-201ENST00000611559 WDR97A6NE52 1622 aa10.37□□□□□ -0.75
AC027088.4-201ENST00000611559 RAD54L2Q9Y4B4 1467 aa10.36□□□□□ -0.75
AC027088.4-201ENST00000611559 EIF4G3O43432 1585 aaKnown RBP10.36□□□□□ -0.75
AC027088.4-201ENST00000611559 TOP2BQ02880 1626 aa10.35□□□□□ -0.75
AC027088.4-201ENST00000611559 BIVM-ERCC5R4GMW8 1640 aa10.34□□□□□ -0.75
AC027088.4-201ENST00000611559 RNF216Q9NWF9 866 aaPredicted RBP10.34□□□□□ -0.75
AC027088.4-201ENST00000611559 AQRO60306 1485 aaKnown RBP eCLIP10.33□□□□□ -0.76
AC027088.4-201ENST00000611559 SYNJ1O43426 1573 aa10.33□□□□□ -0.76
AC027088.4-201ENST00000611559 TDRD9Q8NDG6 1382 aaKnown RBP10.32□□□□□ -0.76
AC027088.4-201ENST00000611559 ABCA10Q8WWZ4 1543 aa10.32□□□□□ -0.76
AC027088.4-201ENST00000611559 GRIN2BQ13224 1484 aa10.29□□□□□ -0.76
AC027088.4-201ENST00000611559 OSCARQ8IYS5 282 aa10.28□□□□□ -0.76
AC027088.4-201ENST00000611559 GAPVD1Q14C86 1478 aa10.28□□□□□ -0.76
AC027088.4-201ENST00000611559 FOXD4L1Q9NU39 408 aa10.27□□□□□ -0.77
AC027088.4-201ENST00000611559 MAGI1Q96QZ7 1491 aaPredicted RBP10.27□□□□□ -0.77
AC027088.4-201ENST00000611559 ABCA5Q8WWZ7 1642 aa10.26□□□□□ -0.77
AC027088.4-201ENST00000611559 SNAPC4Q5SXM2 1469 aa10.25□□□□□ -0.77
AC027088.4-201ENST00000611559 DMRT2Q9Y5R5 561 aa10.24□□□□□ -0.77
AC027088.4-201ENST00000611559 POTEDQ86YR6 584 aa10.23□□□□□ -0.77
AC027088.4-201ENST00000611559 SYNJ2O15056 1496 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 159.3 ms