RNA–Protein interactions for RNA: ENST00000609365.1

AP000229.1-202, humanhuman

TSL 4 BASIC

Gene AP000229.1, Length 559 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000229.1-202ENST00000609365 AEBP2Q6ZN18 517 aaPredicted RBP37.52■■■■□ 3.6
AP000229.1-202ENST00000609365 CHIC1Q5VXU3 224 aa36.02■■■■□ 3.36
AP000229.1-202ENST00000609365 NISCHQ9Y2I1 1504 aa35.38■■■■□ 3.25
AP000229.1-202ENST00000609365 SENP3Q9H4L4 574 aaPredicted RBP31.87■■■□□ 2.69
AP000229.1-202ENST00000609365 PHF23Q9BUL5 403 aaPredicted RBP31.65■■■□□ 2.66
AP000229.1-202ENST00000609365 CCDC180Q9P1Z9 1646 aa31.18■■■□□ 2.58
AP000229.1-202ENST00000609365 ABCC9O60706 1549 aa30.51■■■□□ 2.47
AP000229.1-202ENST00000609365 DCAF8L2P0C7V8 631 aa29.77■■■□□ 2.36
AP000229.1-202ENST00000609365 FOXD1Q16676 465 aa29.68■■■□□ 2.34
AP000229.1-202ENST00000609365 ZCCHC6Q5VYS8 1495 aaKnown RBP29.52■■■□□ 2.32
AP000229.1-202ENST00000609365 NACADO15069 1562 aa29.31■■■□□ 2.28
AP000229.1-202ENST00000609365 RB1CC1Q8TDY2 1594 aa29.3■■■□□ 2.28
AP000229.1-202ENST00000609365 DCAF1Q9Y4B6 1507 aa29.15■■■□□ 2.26
AP000229.1-202ENST00000609365 MYO15BQ96JP2 1530 aa29.12■■■□□ 2.25
AP000229.1-202ENST00000609365 PLPPR3Q6T4P5 718 aa28.94■■■□□ 2.22
AP000229.1-202ENST00000609365 SCRIBQ14160 1630 aa28.7■■■□□ 2.19
AP000229.1-202ENST00000609365 PABPN1Q86U42 306 aaKnown RBP eCLIP28.66■■■□□ 2.18
AP000229.1-202ENST00000609365 UNC13AQ9UPW8 1703 aa28.57■■■□□ 2.16
AP000229.1-202ENST00000609365 SHROOM4Q9ULL8 1493 aa28.44■■■□□ 2.14
AP000229.1-202ENST00000609365 BICRAQ9NZM4 1560 aa28.41■■■□□ 2.14
AP000229.1-202ENST00000609365 PPP6R1Q9UPN7 881 aa28.1■■■□□ 2.09
AP000229.1-202ENST00000609365 ADRA2BP18089 450 aa27.98■■■□□ 2.07
AP000229.1-202ENST00000609365 PIAS4Q8N2W9 510 aaPredicted RBP27.78■■■□□ 2.04
AP000229.1-202ENST00000609365 DNAJC5BQ9UF47 199 aa27.76■■■□□ 2.03
AP000229.1-202ENST00000609365 EIF4G1Q04637 1599 aaKnown RBP27.65■■■□□ 2.02
AP000229.1-202ENST00000609365 CECR2Q9BXF3 1484 aa27.63■■■□□ 2.01
AP000229.1-202ENST00000609365 MSH5O43196 834 aa27.58■■■□□ 2.01
AP000229.1-202ENST00000609365 CC2D2AQ9P2K1 1620 aa27.49■■□□□ 1.99
AP000229.1-202ENST00000609365 BAZ1AQ9NRL2 1556 aaPredicted RBP27.38■■□□□ 1.97
AP000229.1-202ENST00000609365 SMARCA4P51532 1647 aa27.38■■□□□ 1.97
AP000229.1-202ENST00000609365 MROH2BQ7Z745 1585 aa27.34■■□□□ 1.97
AP000229.1-202ENST00000609365 ATAD2BQ9ULI0 1458 aa27.19■■□□□ 1.94
AP000229.1-202ENST00000609365 RSF1Q96T23 1441 aaPredicted RBP27.14■■□□□ 1.93
AP000229.1-202ENST00000609365 SMARCA2P51531 1590 aa27.11■■□□□ 1.93
AP000229.1-202ENST00000609365 NCAPD3P42695 1498 aa27.07■■□□□ 1.92
AP000229.1-202ENST00000609365 WIZO95785 1651 aa27.05■■□□□ 1.92
AP000229.1-202ENST00000609365 BAZ1BQ9UIG0 1483 aaKnown RBP27.01■■□□□ 1.91
AP000229.1-202ENST00000609365 PEG3Q9GZU2 1588 aa27■■□□□ 1.91
AP000229.1-202ENST00000609365 HMGXB3Q12766 1538 aa26.93■■□□□ 1.9
AP000229.1-202ENST00000609365 SUPT5HO00267 1087 aaKnown RBP26.91■■□□□ 1.9
AP000229.1-202ENST00000609365 TOP2AP11388 1531 aaKnown RBP26.73■■□□□ 1.87
AP000229.1-202ENST00000609365 CCDC88BA6NC98 1476 aa26.49■■□□□ 1.83
AP000229.1-202ENST00000609365 NESP48681 1621 aa26.47■■□□□ 1.83
AP000229.1-202ENST00000609365 CADPSQ9ULU8 1353 aa26.37■■□□□ 1.81
AP000229.1-202ENST00000609365 LAMC3Q9Y6N6 1575 aa26.28■■□□□ 1.8
AP000229.1-202ENST00000609365 ERCC6Q03468 1493 aa26.25■■□□□ 1.79
AP000229.1-202ENST00000609365 CFTRP13569 1480 aa26.23■■□□□ 1.79
AP000229.1-202ENST00000609365 POTEDQ86YR6 584 aa26.2■■□□□ 1.78
AP000229.1-202ENST00000609365 PDS5BQ9NTI5 1447 aa26.18■■□□□ 1.78
AP000229.1-202ENST00000609365 FANCD2Q9BXW9 1451 aa26.09■■□□□ 1.77
AP000229.1-202ENST00000609365 KIF21AQ7Z4S6 1674 aa26.05■■□□□ 1.76
AP000229.1-202ENST00000609365 CEP164Q9UPV0 1460 aa26.01■■□□□ 1.75
AP000229.1-202ENST00000609365 PRDM2Q13029 1718 aa25.91■■□□□ 1.74
AP000229.1-202ENST00000609365 MRC2Q9UBG0 1479 aa25.9■■□□□ 1.74
AP000229.1-202ENST00000609365 THOC2Q8NI27 1593 aaKnown RBP25.86■■□□□ 1.73
AP000229.1-202ENST00000609365 URB2Q14146 1524 aaKnown RBP25.8■■□□□ 1.72
AP000229.1-202ENST00000609365 WDR62O43379 1518 aa25.74■■□□□ 1.71
AP000229.1-202ENST00000609365 CUX2O14529 1486 aa25.72■■□□□ 1.71
AP000229.1-202ENST00000609365 TOPBP1Q92547 1522 aa25.68■■□□□ 1.7
AP000229.1-202ENST00000609365 ABCC8Q09428 1581 aa25.65■■□□□ 1.7
AP000229.1-202ENST00000609365 DNMBPQ6XZF7 1577 aa25.64■■□□□ 1.69
AP000229.1-202ENST00000609365 CUX1P39880 1505 aa25.62■■□□□ 1.69
AP000229.1-202ENST00000609365 MAPK8IP2Q13387 824 aaPredicted RBP25.59■■□□□ 1.69
AP000229.1-202ENST00000609365 WRNQ14191 1432 aaPredicted RBP eCLIP25.58■■□□□ 1.69
AP000229.1-202ENST00000609365 SCAF1Q9H7N4 1312 aaKnown RBP25.57■■□□□ 1.68
AP000229.1-202ENST00000609365 FGD5Q6ZNL6 1462 aa25.5■■□□□ 1.67
AP000229.1-202ENST00000609365 POLA1P09884 1462 aaPredicted RBP25.49■■□□□ 1.67
AP000229.1-202ENST00000609365 SYNJ1O43426 1573 aa25.48■■□□□ 1.67
AP000229.1-202ENST00000609365 RAD54L2Q9Y4B4 1467 aa25.47■■□□□ 1.67
AP000229.1-202ENST00000609365 SOGA1O94964 1423 aa25.44■■□□□ 1.66
AP000229.1-202ENST00000609365 IFT140Q96RY7 1462 aa25.42■■□□□ 1.66
AP000229.1-202ENST00000609365 PPP4R3CPQ6ZMV5 832 aa25.42■■□□□ 1.66
AP000229.1-202ENST00000609365 TOP2BQ02880 1626 aa25.41■■□□□ 1.66
AP000229.1-202ENST00000609365 DMRT2Q9Y5R5 561 aa25.38■■□□□ 1.65
AP000229.1-202ENST00000609365 BIVM-ERCC5R4GMW8 1640 aa25.37■■□□□ 1.65
AP000229.1-202ENST00000609365 ZNF608Q9ULD9 1512 aaPredicted RBP25.37■■□□□ 1.65
AP000229.1-202ENST00000609365 TRIM41Q8WV44 630 aa25.32■■□□□ 1.64
AP000229.1-202ENST00000609365 TARBP1Q13395 1621 aaKnown RBP25.32■■□□□ 1.64
AP000229.1-202ENST00000609365 TDRD9Q8NDG6 1382 aaKnown RBP25.31■■□□□ 1.64
AP000229.1-202ENST00000609365 AQRO60306 1485 aaKnown RBP eCLIP25.28■■□□□ 1.64
AP000229.1-202ENST00000609365 ABCA10Q8WWZ4 1543 aa25.19■■□□□ 1.62
AP000229.1-202ENST00000609365 EIF4G3O43432 1585 aaKnown RBP25.18■■□□□ 1.62
AP000229.1-202ENST00000609365 WDR97A6NE52 1622 aa25.13■■□□□ 1.61
AP000229.1-202ENST00000609365 GAPVD1Q14C86 1478 aa25.12■■□□□ 1.61
AP000229.1-202ENST00000609365 GRIN2BQ13224 1484 aa25.05■■□□□ 1.6
AP000229.1-202ENST00000609365 FBLN2P98095 1184 aa25.05■■□□□ 1.6
AP000229.1-202ENST00000609365 ABCA5Q8WWZ7 1642 aa25.04■■□□□ 1.6
AP000229.1-202ENST00000609365 SNAPC4Q5SXM2 1469 aa25.02■■□□□ 1.6
AP000229.1-202ENST00000609365 KIF27Q86VH2 1401 aa25.02■■□□□ 1.6
AP000229.1-202ENST00000609365 RUSC2Q8N2Y8 1516 aa24.97■■□□□ 1.59
AP000229.1-202ENST00000609365 PBRM1Q86U86 1689 aa24.96■■□□□ 1.59
AP000229.1-202ENST00000609365 FAM9AQ8IZU1 332 aaPredicted RBP24.93■■□□□ 1.58
AP000229.1-202ENST00000609365 CHMP7Q8WUX9 453 aaPredicted RBP24.93■■□□□ 1.58
AP000229.1-202ENST00000609365 MAGI1Q96QZ7 1491 aaPredicted RBP24.9■■□□□ 1.58
AP000229.1-202ENST00000609365 IGF1RP08069 1367 aa24.9■■□□□ 1.58
AP000229.1-202ENST00000609365 ERICH3Q5RHP9 1530 aa24.87■■□□□ 1.57
AP000229.1-202ENST00000609365 CNKSR2Q8WXI2 1034 aa24.86■■□□□ 1.57
AP000229.1-202ENST00000609365 OSCARQ8IYS5 282 aa24.84■■□□□ 1.57
AP000229.1-202ENST00000609365 SYNJ2O15056 1496 aa24.83■■□□□ 1.57
AP000229.1-202ENST00000609365 ADAMTS12P58397 1594 aa24.81■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms