RNA–Protein interactions for RNA: ENST00000604790.2

NXF2-201, Transcript of nuclear RNA export factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXF2, Length 2,143 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF2-201ENST00000604790 NISCHQ9Y2I1 1504 aa14.25□□□□□ -0.13
NXF2-201ENST00000604790 CCDC180Q9P1Z9 1646 aa12.74□□□□□ -0.37
NXF2-201ENST00000604790 ABCC9O60706 1549 aa12.66□□□□□ -0.38
NXF2-201ENST00000604790 RB1CC1Q8TDY2 1594 aa12.1□□□□□ -0.47
NXF2-201ENST00000604790 DCAF8L2P0C7V8 631 aa12.09□□□□□ -0.47
NXF2-201ENST00000604790 NACADO15069 1562 aa12.05□□□□□ -0.48
NXF2-201ENST00000604790 MYO15BQ96JP2 1530 aa11.94□□□□□ -0.5
NXF2-201ENST00000604790 ZCCHC6Q5VYS8 1495 aaKnown RBP11.87□□□□□ -0.51
NXF2-201ENST00000604790 UNC13AQ9UPW8 1703 aa11.86□□□□□ -0.51
NXF2-201ENST00000604790 DNAJC5BQ9UF47 199 aa11.84□□□□□ -0.51
NXF2-201ENST00000604790 DCAF1Q9Y4B6 1507 aa11.79□□□□□ -0.52
NXF2-201ENST00000604790 PABPN1Q86U42 306 aaKnown RBP eCLIP11.78□□□□□ -0.52
NXF2-201ENST00000604790 HRCP23327 699 aa11.77□□□□□ -0.53
NXF2-201ENST00000604790 BICRAQ9NZM4 1560 aa11.74□□□□□ -0.53
NXF2-201ENST00000604790 SCRIBQ14160 1630 aa11.74□□□□□ -0.53
NXF2-201ENST00000604790 PELP1Q8IZL8 1130 aaKnown RBP11.67□□□□□ -0.54
NXF2-201ENST00000604790 SHROOM4Q9ULL8 1493 aa11.67□□□□□ -0.54
NXF2-201ENST00000604790 CC2D2AQ9P2K1 1620 aa11.45□□□□□ -0.58
NXF2-201ENST00000604790 EIF4G1Q04637 1599 aaKnown RBP11.45□□□□□ -0.58
NXF2-201ENST00000604790 CECR2Q9BXF3 1484 aa11.43□□□□□ -0.58
NXF2-201ENST00000604790 PCGF6Q9BYE7 350 aa11.39□□□□□ -0.59
NXF2-201ENST00000604790 PPARGC1BQ86YN6 1023 aaKnown RBP11.35□□□□□ -0.59
NXF2-201ENST00000604790 MYT1Q01538 1121 aa11.32□□□□□ -0.6
NXF2-201ENST00000604790 SUPT5HO00267 1087 aaKnown RBP11.3□□□□□ -0.6
NXF2-201ENST00000604790 CHIC1Q5VXU3 224 aa11.24□□□□□ -0.61
NXF2-201ENST00000604790 ZEB1P37275 1124 aaPredicted RBP11.15□□□□□ -0.62
NXF2-201ENST00000604790 NCAPD3P42695 1498 aa11.13□□□□□ -0.63
NXF2-201ENST00000604790 SMARCA4P51532 1647 aa11.12□□□□□ -0.63
NXF2-201ENST00000604790 SCAF1Q9H7N4 1312 aaKnown RBP11.12□□□□□ -0.63
NXF2-201ENST00000604790 TRIM26Q12899 539 aaPredicted RBP11.12□□□□□ -0.63
NXF2-201ENST00000604790 ATAD2BQ9ULI0 1458 aa11.08□□□□□ -0.64
NXF2-201ENST00000604790 SMARCA2P51531 1590 aa11.05□□□□□ -0.64
NXF2-201ENST00000604790 MROH2BQ7Z745 1585 aa11.05□□□□□ -0.64
NXF2-201ENST00000604790 HMGXB3Q12766 1538 aa11.05□□□□□ -0.64
NXF2-201ENST00000604790 BAZ1AQ9NRL2 1556 aaPredicted RBP11.04□□□□□ -0.64
NXF2-201ENST00000604790 PEG3Q9GZU2 1588 aa11□□□□□ -0.65
NXF2-201ENST00000604790 WIZO95785 1651 aa10.99□□□□□ -0.65
NXF2-201ENST00000604790 BAZ1BQ9UIG0 1483 aaKnown RBP10.97□□□□□ -0.65
NXF2-201ENST00000604790 CUX2O14529 1486 aa10.96□□□□□ -0.66
NXF2-201ENST00000604790 ERCC6Q03468 1493 aa10.93□□□□□ -0.66
NXF2-201ENST00000604790 NESP48681 1621 aa10.91□□□□□ -0.66
NXF2-201ENST00000604790 LOC105371045A0A1W2PR82 267 aa10.89□□□□□ -0.67
NXF2-201ENST00000604790 DNAJC5Q9H3Z4 198 aa10.88□□□□□ -0.67
NXF2-201ENST00000604790 ACIN1Q9UKV3 1341 aaKnown RBP10.88□□□□□ -0.67
NXF2-201ENST00000604790 LAMC3Q9Y6N6 1575 aa10.86□□□□□ -0.67
NXF2-201ENST00000604790 RSF1Q96T23 1441 aaPredicted RBP10.84□□□□□ -0.67
NXF2-201ENST00000604790 CENPBP07199 599 aaPredicted RBP10.81□□□□□ -0.68
NXF2-201ENST00000604790 KIF21AQ7Z4S6 1674 aa10.8□□□□□ -0.68
NXF2-201ENST00000604790 PDS5BQ9NTI5 1447 aa10.8□□□□□ -0.68
NXF2-201ENST00000604790 THOC2Q8NI27 1593 aaKnown RBP10.79□□□□□ -0.68
NXF2-201ENST00000604790 CADPSQ9ULU8 1353 aa10.78□□□□□ -0.68
NXF2-201ENST00000604790 NEUROD1Q13562 356 aa10.78□□□□□ -0.68
NXF2-201ENST00000604790 TOP2AP11388 1531 aaKnown RBP10.76□□□□□ -0.69
NXF2-201ENST00000604790 GTF3C3Q9Y5Q9 886 aa10.75□□□□□ -0.69
NXF2-201ENST00000604790 MRC2Q9UBG0 1479 aa10.69□□□□□ -0.7
NXF2-201ENST00000604790 TTBK1Q5TCY1 1321 aaPredicted RBP10.68□□□□□ -0.7
NXF2-201ENST00000604790 WDR62O43379 1518 aa10.67□□□□□ -0.7
NXF2-201ENST00000604790 CFTRP13569 1480 aa10.67□□□□□ -0.7
NXF2-201ENST00000604790 CCDC88BA6NC98 1476 aa10.65□□□□□ -0.7
NXF2-201ENST00000604790 CEP164Q9UPV0 1460 aa10.65□□□□□ -0.7
NXF2-201ENST00000604790 DIEXFQ68CQ4 756 aaKnown RBP10.64□□□□□ -0.71
NXF2-201ENST00000604790 FANCD2Q9BXW9 1451 aa10.64□□□□□ -0.71
NXF2-201ENST00000604790 PRDM2Q13029 1718 aa10.62□□□□□ -0.71
NXF2-201ENST00000604790 CCER1Q8TC90 406 aaPredicted RBP10.56□□□□□ -0.72
NXF2-201ENST00000604790 URB2Q14146 1524 aaKnown RBP10.54□□□□□ -0.72
NXF2-201ENST00000604790 TRIM41Q8WV44 630 aa10.53□□□□□ -0.72
NXF2-201ENST00000604790 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.51□□□□□ -0.73
NXF2-201ENST00000604790 ABCC8Q09428 1581 aa10.46□□□□□ -0.74
NXF2-201ENST00000604790 IFT140Q96RY7 1462 aa10.46□□□□□ -0.74
NXF2-201ENST00000604790 TOPBP1Q92547 1522 aa10.44□□□□□ -0.74
NXF2-201ENST00000604790 ZNF316A6NFI3 1004 aaPredicted RBP10.43□□□□□ -0.74
NXF2-201ENST00000604790 CLSPNQ9HAW4 1339 aa10.43□□□□□ -0.74
NXF2-201ENST00000604790 OSCARQ8IYS5 282 aa10.43□□□□□ -0.74
NXF2-201ENST00000604790 DNMBPQ6XZF7 1577 aa10.41□□□□□ -0.74
NXF2-201ENST00000604790 ZNF608Q9ULD9 1512 aaPredicted RBP10.41□□□□□ -0.74
NXF2-201ENST00000604790 FAM9AQ8IZU1 332 aaPredicted RBP10.4□□□□□ -0.74
NXF2-201ENST00000604790 EIF4G3O43432 1585 aaKnown RBP10.37□□□□□ -0.75
NXF2-201ENST00000604790 CUX1P39880 1505 aa10.37□□□□□ -0.75
NXF2-201ENST00000604790 RAD54L2Q9Y4B4 1467 aa10.36□□□□□ -0.75
NXF2-201ENST00000604790 POLA1P09884 1462 aaPredicted RBP10.36□□□□□ -0.75
NXF2-201ENST00000604790 YTHDC1Q96MU7 727 aaKnown RBP10.36□□□□□ -0.75
NXF2-201ENST00000604790 TARBP1Q13395 1621 aaKnown RBP10.34□□□□□ -0.75
NXF2-201ENST00000604790 FGD5Q6ZNL6 1462 aa10.34□□□□□ -0.75
NXF2-201ENST00000604790 ANP32EQ9BTT0 268 aa10.34□□□□□ -0.75
NXF2-201ENST00000604790 BCL11AQ9H165 835 aa10.33□□□□□ -0.76
NXF2-201ENST00000604790 WRNQ14191 1432 aaPredicted RBP eCLIP10.33□□□□□ -0.76
NXF2-201ENST00000604790 AQRO60306 1485 aaKnown RBP eCLIP10.33□□□□□ -0.76
NXF2-201ENST00000604790 SYNJ1O43426 1573 aa10.3□□□□□ -0.76
NXF2-201ENST00000604790 MIER1Q8N108 512 aa10.3□□□□□ -0.76
NXF2-201ENST00000604790 CHD1O14646 1710 aa10.3□□□□□ -0.76
NXF2-201ENST00000604790 WDR97A6NE52 1622 aa10.29□□□□□ -0.76
NXF2-201ENST00000604790 TDRD9Q8NDG6 1382 aaKnown RBP10.29□□□□□ -0.76
NXF2-201ENST00000604790 SOGA1O94964 1423 aa10.29□□□□□ -0.76
NXF2-201ENST00000604790 RIMBP3CA6NJZ7 1639 aa10.27□□□□□ -0.77
NXF2-201ENST00000604790 RIMBP3BA6NNM3 1639 aa10.27□□□□□ -0.77
NXF2-201ENST00000604790 RIMBP3Q9UFD9 1639 aa10.27□□□□□ -0.77
NXF2-201ENST00000604790 EHMT2Q96KQ7 1210 aa10.27□□□□□ -0.77
NXF2-201ENST00000604790 ARHGEF11O15085 1522 aa10.26□□□□□ -0.77
NXF2-201ENST00000604790 FBLN2P98095 1184 aa10.25□□□□□ -0.77
NXF2-201ENST00000604790 PBRM1Q86U86 1689 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms