RNA–Protein interactions for RNA: ENST00000603784.1

AC004004.1-201, humanhuman

BASIC

Gene AC004004.1, Length 250 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004004.1-201ENST00000603784 AEBP2Q6ZN18 517 aaPredicted RBP27.27■■□□□ 1.96
AC004004.1-201ENST00000603784 CHIC1Q5VXU3 224 aa26.56■■□□□ 1.84
AC004004.1-201ENST00000603784 NISCHQ9Y2I1 1504 aa24.21■■□□□ 1.47
AC004004.1-201ENST00000603784 SENP3Q9H4L4 574 aaPredicted RBP23.41■■□□□ 1.34
AC004004.1-201ENST00000603784 PHF23Q9BUL5 403 aaPredicted RBP23.3■■□□□ 1.32
AC004004.1-201ENST00000603784 FOXD1Q16676 465 aa21.63■■□□□ 1.05
AC004004.1-201ENST00000603784 CCDC180Q9P1Z9 1646 aa21.62■■□□□ 1.05
AC004004.1-201ENST00000603784 PLPPR3Q6T4P5 718 aa21.61■■□□□ 1.05
AC004004.1-201ENST00000603784 ABCC9O60706 1549 aa21.34■■□□□ 1.01
AC004004.1-201ENST00000603784 ADRA2BP18089 450 aa20.58■□□□□ 0.89
AC004004.1-201ENST00000603784 PPP6R1Q9UPN7 881 aa20.56■□□□□ 0.88
AC004004.1-201ENST00000603784 RB1CC1Q8TDY2 1594 aa20.41■□□□□ 0.86
AC004004.1-201ENST00000603784 PIAS4Q8N2W9 510 aaPredicted RBP20.37■□□□□ 0.85
AC004004.1-201ENST00000603784 DCAF8L2P0C7V8 631 aa20.34■□□□□ 0.85
AC004004.1-201ENST00000603784 NACADO15069 1562 aa20.32■□□□□ 0.84
AC004004.1-201ENST00000603784 MSH5O43196 834 aa20.25■□□□□ 0.83
AC004004.1-201ENST00000603784 ZCCHC6Q5VYS8 1495 aaKnown RBP20.13■□□□□ 0.81
AC004004.1-201ENST00000603784 UNC13AQ9UPW8 1703 aa20.07■□□□□ 0.8
AC004004.1-201ENST00000603784 MYO15BQ96JP2 1530 aa20.07■□□□□ 0.8
AC004004.1-201ENST00000603784 DCAF1Q9Y4B6 1507 aa19.97■□□□□ 0.79
AC004004.1-201ENST00000603784 PABPN1Q86U42 306 aaKnown RBP eCLIP19.9■□□□□ 0.78
AC004004.1-201ENST00000603784 BICRAQ9NZM4 1560 aa19.83■□□□□ 0.76
AC004004.1-201ENST00000603784 SCRIBQ14160 1630 aa19.78■□□□□ 0.76
AC004004.1-201ENST00000603784 DNAJC5BQ9UF47 199 aa19.7■□□□□ 0.74
AC004004.1-201ENST00000603784 SHROOM4Q9ULL8 1493 aa19.48■□□□□ 0.71
AC004004.1-201ENST00000603784 EIF4G1Q04637 1599 aaKnown RBP19.31■□□□□ 0.68
AC004004.1-201ENST00000603784 CC2D2AQ9P2K1 1620 aa19.29■□□□□ 0.68
AC004004.1-201ENST00000603784 CECR2Q9BXF3 1484 aa19.15■□□□□ 0.66
AC004004.1-201ENST00000603784 PPP4R3CPQ6ZMV5 832 aa19.02■□□□□ 0.64
AC004004.1-201ENST00000603784 POTEDQ86YR6 584 aa18.95■□□□□ 0.62
AC004004.1-201ENST00000603784 SCAF1Q9H7N4 1312 aaKnown RBP18.94■□□□□ 0.62
AC004004.1-201ENST00000603784 SMARCA4P51532 1647 aa18.86■□□□□ 0.61
AC004004.1-201ENST00000603784 BAZ1AQ9NRL2 1556 aaPredicted RBP18.77■□□□□ 0.6
AC004004.1-201ENST00000603784 ATAD2BQ9ULI0 1458 aa18.75■□□□□ 0.59
AC004004.1-201ENST00000603784 NCAPD3P42695 1498 aa18.71■□□□□ 0.59
AC004004.1-201ENST00000603784 SMARCA2P51531 1590 aa18.71■□□□□ 0.59
AC004004.1-201ENST00000603784 MROH2BQ7Z745 1585 aa18.69■□□□□ 0.58
AC004004.1-201ENST00000603784 HMGXB3Q12766 1538 aa18.65■□□□□ 0.58
AC004004.1-201ENST00000603784 MAPK8IP2Q13387 824 aaPredicted RBP18.65■□□□□ 0.58
AC004004.1-201ENST00000603784 PEG3Q9GZU2 1588 aa18.61■□□□□ 0.57
AC004004.1-201ENST00000603784 BAZ1BQ9UIG0 1483 aaKnown RBP18.6■□□□□ 0.57
AC004004.1-201ENST00000603784 KCNA4P22459 653 aa18.59■□□□□ 0.57
AC004004.1-201ENST00000603784 DMRT2Q9Y5R5 561 aa18.58■□□□□ 0.56
AC004004.1-201ENST00000603784 NCBP3Q53F19 620 aaKnown RBP18.57■□□□□ 0.56
AC004004.1-201ENST00000603784 WIZO95785 1651 aa18.54■□□□□ 0.56
AC004004.1-201ENST00000603784 CNKSR2Q8WXI2 1034 aa18.49■□□□□ 0.55
AC004004.1-201ENST00000603784 NESP48681 1621 aa18.43■□□□□ 0.54
AC004004.1-201ENST00000603784 RSF1Q96T23 1441 aaPredicted RBP18.38■□□□□ 0.53
AC004004.1-201ENST00000603784 ERCC6Q03468 1493 aa18.38■□□□□ 0.53
AC004004.1-201ENST00000603784 LAMC3Q9Y6N6 1575 aa18.3■□□□□ 0.52
AC004004.1-201ENST00000603784 TOP2AP11388 1531 aaKnown RBP18.26■□□□□ 0.51
AC004004.1-201ENST00000603784 KIF21AQ7Z4S6 1674 aa18.25■□□□□ 0.51
AC004004.1-201ENST00000603784 NPM3O75607 178 aaKnown RBP18.25■□□□□ 0.51
AC004004.1-201ENST00000603784 CUX2O14529 1486 aa18.19■□□□□ 0.5
AC004004.1-201ENST00000603784 CADPSQ9ULU8 1353 aa18.18■□□□□ 0.5
AC004004.1-201ENST00000603784 THOC2Q8NI27 1593 aaKnown RBP18.18■□□□□ 0.5
AC004004.1-201ENST00000603784 PDS5BQ9NTI5 1447 aa18.15■□□□□ 0.5
AC004004.1-201ENST00000603784 RNF216Q9NWF9 866 aaPredicted RBP18.12■□□□□ 0.49
AC004004.1-201ENST00000603784 HOXD11P31277 338 aaPredicted RBP18.05■□□□□ 0.48
AC004004.1-201ENST00000603784 CCDC88BA6NC98 1476 aa18.05■□□□□ 0.48
AC004004.1-201ENST00000603784 CFTRP13569 1480 aa18.05■□□□□ 0.48
AC004004.1-201ENST00000603784 PRDM2Q13029 1718 aa18.02■□□□□ 0.48
AC004004.1-201ENST00000603784 FANCD2Q9BXW9 1451 aa18.01■□□□□ 0.47
AC004004.1-201ENST00000603784 MRC2Q9UBG0 1479 aa18.01■□□□□ 0.47
AC004004.1-201ENST00000603784 CEP164Q9UPV0 1460 aa18.01■□□□□ 0.47
AC004004.1-201ENST00000603784 WDR62O43379 1518 aa17.96■□□□□ 0.47
AC004004.1-201ENST00000603784 URB2Q14146 1524 aaKnown RBP17.87■□□□□ 0.45
AC004004.1-201ENST00000603784 SUPT5HO00267 1087 aaKnown RBP17.85■□□□□ 0.45
AC004004.1-201ENST00000603784 DNAJC5Q9H3Z4 198 aa17.79■□□□□ 0.44
AC004004.1-201ENST00000603784 DCAF8L1A6NGE4 600 aa17.76■□□□□ 0.43
AC004004.1-201ENST00000603784 SLC4A1APQ9BWU0 796 aaKnown RBP17.74■□□□□ 0.43
AC004004.1-201ENST00000603784 TOPBP1Q92547 1522 aa17.72■□□□□ 0.43
AC004004.1-201ENST00000603784 DNMBPQ6XZF7 1577 aa17.69■□□□□ 0.42
AC004004.1-201ENST00000603784 ABCC8Q09428 1581 aa17.64■□□□□ 0.41
AC004004.1-201ENST00000603784 IFT140Q96RY7 1462 aa17.61■□□□□ 0.41
AC004004.1-201ENST00000603784 ZNF608Q9ULD9 1512 aaPredicted RBP17.6■□□□□ 0.41
AC004004.1-201ENST00000603784 TARBP1Q13395 1621 aaKnown RBP17.56■□□□□ 0.4
AC004004.1-201ENST00000603784 POLA1P09884 1462 aaPredicted RBP17.56■□□□□ 0.4
AC004004.1-201ENST00000603784 EIF4G3O43432 1585 aaKnown RBP17.55■□□□□ 0.4
AC004004.1-201ENST00000603784 CUX1P39880 1505 aa17.55■□□□□ 0.4
AC004004.1-201ENST00000603784 RAD54L2Q9Y4B4 1467 aa17.51■□□□□ 0.39
AC004004.1-201ENST00000603784 FGD5Q6ZNL6 1462 aa17.5■□□□□ 0.39
AC004004.1-201ENST00000603784 AQRO60306 1485 aaKnown RBP eCLIP17.47■□□□□ 0.39
AC004004.1-201ENST00000603784 SOGA1O94964 1423 aa17.46■□□□□ 0.39
AC004004.1-201ENST00000603784 WDR97A6NE52 1622 aa17.42■□□□□ 0.38
AC004004.1-201ENST00000603784 CHD1O14646 1710 aa17.41■□□□□ 0.38
AC004004.1-201ENST00000603784 TDRD9Q8NDG6 1382 aaKnown RBP17.4■□□□□ 0.38
AC004004.1-201ENST00000603784 OSCARQ8IYS5 282 aa17.39■□□□□ 0.37
AC004004.1-201ENST00000603784 SYNJ1O43426 1573 aa17.37■□□□□ 0.37
AC004004.1-201ENST00000603784 BIVM-ERCC5R4GMW8 1640 aa17.36■□□□□ 0.37
AC004004.1-201ENST00000603784 TOP2BQ02880 1626 aa17.34■□□□□ 0.37
AC004004.1-201ENST00000603784 PBRM1Q86U86 1689 aa17.34■□□□□ 0.37
AC004004.1-201ENST00000603784 WRNQ14191 1432 aaPredicted RBP eCLIP17.33■□□□□ 0.36
AC004004.1-201ENST00000603784 SNAPC4Q5SXM2 1469 aa17.31■□□□□ 0.36
AC004004.1-201ENST00000603784 FBLN2P98095 1184 aa17.3■□□□□ 0.36
AC004004.1-201ENST00000603784 ABCA10Q8WWZ4 1543 aa17.29■□□□□ 0.36
AC004004.1-201ENST00000603784 ABCA5Q8WWZ7 1642 aa17.29■□□□□ 0.36
AC004004.1-201ENST00000603784 EHMT2Q96KQ7 1210 aa17.28■□□□□ 0.36
AC004004.1-201ENST00000603784 GRIN2BQ13224 1484 aa17.27■□□□□ 0.36
AC004004.1-201ENST00000603784 GAPVD1Q14C86 1478 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms