RNA–Protein interactions for RNA: ENST00000603578.1

PRR13P3-201, Transcript of proline rich 13 pseudogene 3, humanhuman

BASIC

Gene PRR13P3, Length 376 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRR13P3-201ENST00000603578 AEBP2Q6ZN18 517 aaPredicted RBP21.56■■□□□ 1.04
PRR13P3-201ENST00000603578 CHIC1Q5VXU3 224 aa20.51■□□□□ 0.87
PRR13P3-201ENST00000603578 NISCHQ9Y2I1 1504 aa19.31■□□□□ 0.68
PRR13P3-201ENST00000603578 SENP3Q9H4L4 574 aaPredicted RBP18.48■□□□□ 0.55
PRR13P3-201ENST00000603578 PHF23Q9BUL5 403 aaPredicted RBP18.23■□□□□ 0.51
PRR13P3-201ENST00000603578 ABCC9O60706 1549 aa17.67■□□□□ 0.42
PRR13P3-201ENST00000603578 CCDC180Q9P1Z9 1646 aa17.26■□□□□ 0.35
PRR13P3-201ENST00000603578 FOXD1Q16676 465 aa17.18■□□□□ 0.34
PRR13P3-201ENST00000603578 DNAJC5BQ9UF47 199 aa16.95■□□□□ 0.3
PRR13P3-201ENST00000603578 RB1CC1Q8TDY2 1594 aa16.64■□□□□ 0.25
PRR13P3-201ENST00000603578 DCAF8L2P0C7V8 631 aa16.55■□□□□ 0.24
PRR13P3-201ENST00000603578 PABPN1Q86U42 306 aaKnown RBP eCLIP16.52■□□□□ 0.24
PRR13P3-201ENST00000603578 NACADO15069 1562 aa16.51■□□□□ 0.23
PRR13P3-201ENST00000603578 PLPPR3Q6T4P5 718 aa16.44■□□□□ 0.22
PRR13P3-201ENST00000603578 MYO15BQ96JP2 1530 aa16.24■□□□□ 0.19
PRR13P3-201ENST00000603578 BICRAQ9NZM4 1560 aa16.18■□□□□ 0.18
PRR13P3-201ENST00000603578 MSH5O43196 834 aa16.15■□□□□ 0.18
PRR13P3-201ENST00000603578 PIAS4Q8N2W9 510 aaPredicted RBP16.13■□□□□ 0.17
PRR13P3-201ENST00000603578 UNC13AQ9UPW8 1703 aa16.08■□□□□ 0.16
PRR13P3-201ENST00000603578 ADRA2BP18089 450 aa16.04■□□□□ 0.16
PRR13P3-201ENST00000603578 PPP6R1Q9UPN7 881 aa16.03■□□□□ 0.16
PRR13P3-201ENST00000603578 CECR2Q9BXF3 1484 aa15.95■□□□□ 0.14
PRR13P3-201ENST00000603578 SHROOM4Q9ULL8 1493 aa15.94■□□□□ 0.14
PRR13P3-201ENST00000603578 DCAF1Q9Y4B6 1507 aa15.93■□□□□ 0.14
PRR13P3-201ENST00000603578 ZCCHC6Q5VYS8 1495 aaKnown RBP15.92■□□□□ 0.14
PRR13P3-201ENST00000603578 CC2D2AQ9P2K1 1620 aa15.87■□□□□ 0.13
PRR13P3-201ENST00000603578 EIF4G1Q04637 1599 aaKnown RBP15.79■□□□□ 0.12
PRR13P3-201ENST00000603578 SCRIBQ14160 1630 aa15.76■□□□□ 0.11
PRR13P3-201ENST00000603578 POTEDQ86YR6 584 aa15.73■□□□□ 0.11
PRR13P3-201ENST00000603578 DNAJC5Q9H3Z4 198 aa15.73■□□□□ 0.11
PRR13P3-201ENST00000603578 NCAPD3P42695 1498 aa15.33■□□□□ 0.05
PRR13P3-201ENST00000603578 CUX2O14529 1486 aa15.31■□□□□ 0.04
PRR13P3-201ENST00000603578 ERCC6Q03468 1493 aa15.25■□□□□ 0.03
PRR13P3-201ENST00000603578 ATAD2BQ9ULI0 1458 aa15.23■□□□□ 0.03
PRR13P3-201ENST00000603578 SMARCA2P51531 1590 aa15.1■□□□□ 0.01
PRR13P3-201ENST00000603578 NESP48681 1621 aa15.1■□□□□ 0.01
PRR13P3-201ENST00000603578 HMGXB3Q12766 1538 aa15.07■□□□□ 0
PRR13P3-201ENST00000603578 SMARCA4P51532 1647 aa15.03■□□□□ -0
PRR13P3-201ENST00000603578 BAZ1BQ9UIG0 1483 aaKnown RBP15.01□□□□□ -0.01
PRR13P3-201ENST00000603578 BAZ1AQ9NRL2 1556 aaPredicted RBP14.96□□□□□ -0.01
PRR13P3-201ENST00000603578 PDS5BQ9NTI5 1447 aa14.93□□□□□ -0.02
PRR13P3-201ENST00000603578 PEG3Q9GZU2 1588 aa14.93□□□□□ -0.02
PRR13P3-201ENST00000603578 LAMC3Q9Y6N6 1575 aa14.9□□□□□ -0.02
PRR13P3-201ENST00000603578 THOC2Q8NI27 1593 aaKnown RBP14.89□□□□□ -0.03
PRR13P3-201ENST00000603578 TRIM41Q8WV44 630 aa14.88□□□□□ -0.03
PRR13P3-201ENST00000603578 MROH2BQ7Z745 1585 aa14.88□□□□□ -0.03
PRR13P3-201ENST00000603578 CADPSQ9ULU8 1353 aa14.87□□□□□ -0.03
PRR13P3-201ENST00000603578 MRC2Q9UBG0 1479 aa14.76□□□□□ -0.05
PRR13P3-201ENST00000603578 SCAF1Q9H7N4 1312 aaKnown RBP14.75□□□□□ -0.05
PRR13P3-201ENST00000603578 KIF21AQ7Z4S6 1674 aa14.73□□□□□ -0.05
PRR13P3-201ENST00000603578 MAPK8IP2Q13387 824 aaPredicted RBP14.72□□□□□ -0.05
PRR13P3-201ENST00000603578 OSCARQ8IYS5 282 aa14.71□□□□□ -0.05
PRR13P3-201ENST00000603578 WDR62O43379 1518 aa14.69□□□□□ -0.06
PRR13P3-201ENST00000603578 FANCD2Q9BXW9 1451 aa14.63□□□□□ -0.07
PRR13P3-201ENST00000603578 CEP164Q9UPV0 1460 aa14.63□□□□□ -0.07
PRR13P3-201ENST00000603578 CFTRP13569 1480 aa14.62□□□□□ -0.07
PRR13P3-201ENST00000603578 DMRT2Q9Y5R5 561 aa14.61□□□□□ -0.07
PRR13P3-201ENST00000603578 WIZO95785 1651 aa14.59□□□□□ -0.07
PRR13P3-201ENST00000603578 RSF1Q96T23 1441 aaPredicted RBP14.55□□□□□ -0.08
PRR13P3-201ENST00000603578 URB2Q14146 1524 aaKnown RBP14.51□□□□□ -0.09
PRR13P3-201ENST00000603578 TOP2AP11388 1531 aaKnown RBP14.42□□□□□ -0.1
PRR13P3-201ENST00000603578 PPP4R3CPQ6ZMV5 832 aa14.4□□□□□ -0.1
PRR13P3-201ENST00000603578 ZNF608Q9ULD9 1512 aaPredicted RBP14.4□□□□□ -0.1
PRR13P3-201ENST00000603578 IFT140Q96RY7 1462 aa14.39□□□□□ -0.11
PRR13P3-201ENST00000603578 CYB5RLQ6IPT4 315 aa14.38□□□□□ -0.11
PRR13P3-201ENST00000603578 CCDC88BA6NC98 1476 aa14.37□□□□□ -0.11
PRR13P3-201ENST00000603578 RIMBP3CA6NJZ7 1639 aa14.33□□□□□ -0.12
PRR13P3-201ENST00000603578 RIMBP3BA6NNM3 1639 aa14.33□□□□□ -0.12
PRR13P3-201ENST00000603578 RIMBP3Q9UFD9 1639 aa14.33□□□□□ -0.12
PRR13P3-201ENST00000603578 ARHGEF11O15085 1522 aa14.32□□□□□ -0.12
PRR13P3-201ENST00000603578 TOPBP1Q92547 1522 aa14.31□□□□□ -0.12
PRR13P3-201ENST00000603578 ABCC8Q09428 1581 aa14.3□□□□□ -0.12
PRR13P3-201ENST00000603578 AQRO60306 1485 aaKnown RBP eCLIP14.28□□□□□ -0.12
PRR13P3-201ENST00000603578 TRHP20396 242 aaPredicted RBP14.27□□□□□ -0.13
PRR13P3-201ENST00000603578 FBLN2P98095 1184 aa14.27□□□□□ -0.13
PRR13P3-201ENST00000603578 DCAF8L1A6NGE4 600 aa14.19□□□□□ -0.14
PRR13P3-201ENST00000603578 DNMBPQ6XZF7 1577 aa14.18□□□□□ -0.14
PRR13P3-201ENST00000603578 TDRD9Q8NDG6 1382 aaKnown RBP14.18□□□□□ -0.14
PRR13P3-201ENST00000603578 ARAP1Q96P48 1450 aa14.18□□□□□ -0.14
PRR13P3-201ENST00000603578 EIF4G3O43432 1585 aaKnown RBP14.17□□□□□ -0.14
PRR13P3-201ENST00000603578 SOGA1O94964 1423 aa14.16□□□□□ -0.14
PRR13P3-201ENST00000603578 POLA1P09884 1462 aaPredicted RBP14.16□□□□□ -0.14
PRR13P3-201ENST00000603578 TARBP1Q13395 1621 aaKnown RBP14.15□□□□□ -0.14
PRR13P3-201ENST00000603578 RAD54L2Q9Y4B4 1467 aa14.14□□□□□ -0.15
PRR13P3-201ENST00000603578 CHMP7Q8WUX9 453 aaPredicted RBP14.14□□□□□ -0.15
PRR13P3-201ENST00000603578 CNKSR2Q8WXI2 1034 aa14.14□□□□□ -0.15
PRR13P3-201ENST00000603578 PRDM2Q13029 1718 aa14.13□□□□□ -0.15
PRR13P3-201ENST00000603578 HOXD11P31277 338 aaPredicted RBP14.05□□□□□ -0.16
PRR13P3-201ENST00000603578 SNAPC4Q5SXM2 1469 aa14.05□□□□□ -0.16
PRR13P3-201ENST00000603578 CHD1O14646 1710 aa14.04□□□□□ -0.16
PRR13P3-201ENST00000603578 FGD5Q6ZNL6 1462 aa14.02□□□□□ -0.16
PRR13P3-201ENST00000603578 GRIN2BQ13224 1484 aa14.01□□□□□ -0.17
PRR13P3-201ENST00000603578 MAGI1Q96QZ7 1491 aaPredicted RBP14.01□□□□□ -0.17
PRR13P3-201ENST00000603578 CLASP1Q7Z460 1538 aa14□□□□□ -0.17
PRR13P3-201ENST00000603578 RNF216Q9NWF9 866 aaPredicted RBP13.99□□□□□ -0.17
PRR13P3-201ENST00000603578 SYNJ2O15056 1496 aa13.99□□□□□ -0.17
PRR13P3-201ENST00000603578 CUX1P39880 1505 aa13.97□□□□□ -0.17
PRR13P3-201ENST00000603578 WDR97A6NE52 1622 aa13.96□□□□□ -0.17
PRR13P3-201ENST00000603578 SYNJ1O43426 1573 aa13.96□□□□□ -0.18
PRR13P3-201ENST00000603578 GAPVD1Q14C86 1478 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms