RNA–Protein interactions for RNA: ENST00000602303.5

UBE2E3-204, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

TSL 5

Gene UBE2E3, Length 654 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-204ENST00000602303 NISCHQ9Y2I1 1504 aa17.57■□□□□ 0.4
UBE2E3-204ENST00000602303 AEBP2Q6ZN18 517 aaPredicted RBP16.67■□□□□ 0.26
UBE2E3-204ENST00000602303 ABCC9O60706 1549 aa16.17■□□□□ 0.18
UBE2E3-204ENST00000602303 CCDC180Q9P1Z9 1646 aa15.98■□□□□ 0.15
UBE2E3-204ENST00000602303 CHIC1Q5VXU3 224 aa15.73■□□□□ 0.11
UBE2E3-204ENST00000602303 DNAJC5BQ9UF47 199 aa15.46■□□□□ 0.07
UBE2E3-204ENST00000602303 RB1CC1Q8TDY2 1594 aa15.36■□□□□ 0.05
UBE2E3-204ENST00000602303 NACADO15069 1562 aa15.2■□□□□ 0.02
UBE2E3-204ENST00000602303 MYO15BQ96JP2 1530 aa14.97□□□□□ -0.01
UBE2E3-204ENST00000602303 PABPN1Q86U42 306 aaKnown RBP eCLIP14.96□□□□□ -0.01
UBE2E3-204ENST00000602303 UNC13AQ9UPW8 1703 aa14.92□□□□□ -0.02
UBE2E3-204ENST00000602303 BICRAQ9NZM4 1560 aa14.86□□□□□ -0.03
UBE2E3-204ENST00000602303 DCAF8L2P0C7V8 631 aa14.83□□□□□ -0.04
UBE2E3-204ENST00000602303 SHROOM4Q9ULL8 1493 aa14.82□□□□□ -0.04
UBE2E3-204ENST00000602303 CECR2Q9BXF3 1484 aa14.67□□□□□ -0.06
UBE2E3-204ENST00000602303 CC2D2AQ9P2K1 1620 aa14.64□□□□□ -0.07
UBE2E3-204ENST00000602303 DCAF1Q9Y4B6 1507 aa14.6□□□□□ -0.07
UBE2E3-204ENST00000602303 DNAJC5Q9H3Z4 198 aa14.58□□□□□ -0.08
UBE2E3-204ENST00000602303 EIF4G1Q04637 1599 aaKnown RBP14.55□□□□□ -0.08
UBE2E3-204ENST00000602303 ZCCHC6Q5VYS8 1495 aaKnown RBP14.49□□□□□ -0.09
UBE2E3-204ENST00000602303 SCRIBQ14160 1630 aa14.38□□□□□ -0.11
UBE2E3-204ENST00000602303 SENP3Q9H4L4 574 aaPredicted RBP14.35□□□□□ -0.11
UBE2E3-204ENST00000602303 CUX2O14529 1486 aa14.24□□□□□ -0.13
UBE2E3-204ENST00000602303 PHF23Q9BUL5 403 aaPredicted RBP14.11□□□□□ -0.15
UBE2E3-204ENST00000602303 ERCC6Q03468 1493 aa14.05□□□□□ -0.16
UBE2E3-204ENST00000602303 NCAPD3P42695 1498 aa14.03□□□□□ -0.16
UBE2E3-204ENST00000602303 HMGXB3Q12766 1538 aa13.9□□□□□ -0.19
UBE2E3-204ENST00000602303 ATAD2BQ9ULI0 1458 aa13.89□□□□□ -0.19
UBE2E3-204ENST00000602303 SMARCA2P51531 1590 aa13.88□□□□□ -0.19
UBE2E3-204ENST00000602303 THOC2Q8NI27 1593 aaKnown RBP13.79□□□□□ -0.2
UBE2E3-204ENST00000602303 NESP48681 1621 aa13.77□□□□□ -0.21
UBE2E3-204ENST00000602303 LAMC3Q9Y6N6 1575 aa13.77□□□□□ -0.21
UBE2E3-204ENST00000602303 SMARCA4P51532 1647 aa13.76□□□□□ -0.21
UBE2E3-204ENST00000602303 BAZ1BQ9UIG0 1483 aaKnown RBP13.73□□□□□ -0.21
UBE2E3-204ENST00000602303 PEG3Q9GZU2 1588 aa13.72□□□□□ -0.21
UBE2E3-204ENST00000602303 PDS5BQ9NTI5 1447 aa13.7□□□□□ -0.22
UBE2E3-204ENST00000602303 BAZ1AQ9NRL2 1556 aaPredicted RBP13.69□□□□□ -0.22
UBE2E3-204ENST00000602303 TRIM41Q8WV44 630 aa13.65□□□□□ -0.22
UBE2E3-204ENST00000602303 KIF21AQ7Z4S6 1674 aa13.61□□□□□ -0.23
UBE2E3-204ENST00000602303 MRC2Q9UBG0 1479 aa13.56□□□□□ -0.24
UBE2E3-204ENST00000602303 CADPSQ9ULU8 1353 aa13.56□□□□□ -0.24
UBE2E3-204ENST00000602303 WDR62O43379 1518 aa13.55□□□□□ -0.24
UBE2E3-204ENST00000602303 OSCARQ8IYS5 282 aa13.48□□□□□ -0.25
UBE2E3-204ENST00000602303 MROH2BQ7Z745 1585 aa13.47□□□□□ -0.25
UBE2E3-204ENST00000602303 CEP164Q9UPV0 1460 aa13.43□□□□□ -0.26
UBE2E3-204ENST00000602303 FANCD2Q9BXW9 1451 aa13.37□□□□□ -0.27
UBE2E3-204ENST00000602303 FOXD1Q16676 465 aa13.34□□□□□ -0.27
UBE2E3-204ENST00000602303 CFTRP13569 1480 aa13.34□□□□□ -0.27
UBE2E3-204ENST00000602303 RIMBP3CA6NJZ7 1639 aa13.28□□□□□ -0.28
UBE2E3-204ENST00000602303 RIMBP3BA6NNM3 1639 aa13.28□□□□□ -0.28
UBE2E3-204ENST00000602303 RIMBP3Q9UFD9 1639 aa13.28□□□□□ -0.28
UBE2E3-204ENST00000602303 WIZO95785 1651 aa13.26□□□□□ -0.29
UBE2E3-204ENST00000602303 URB2Q14146 1524 aaKnown RBP13.26□□□□□ -0.29
UBE2E3-204ENST00000602303 ARHGEF11O15085 1522 aa13.23□□□□□ -0.29
UBE2E3-204ENST00000602303 IFT140Q96RY7 1462 aa13.21□□□□□ -0.3
UBE2E3-204ENST00000602303 PRDM2Q13029 1718 aa13.16□□□□□ -0.3
UBE2E3-204ENST00000602303 TOP2AP11388 1531 aaKnown RBP13.15□□□□□ -0.3
UBE2E3-204ENST00000602303 ABCC8Q09428 1581 aa13.14□□□□□ -0.31
UBE2E3-204ENST00000602303 ZNF608Q9ULD9 1512 aaPredicted RBP13.12□□□□□ -0.31
UBE2E3-204ENST00000602303 CYB5RLQ6IPT4 315 aa13.11□□□□□ -0.31
UBE2E3-204ENST00000602303 RSF1Q96T23 1441 aaPredicted RBP13.11□□□□□ -0.31
UBE2E3-204ENST00000602303 TOPBP1Q92547 1522 aa13.08□□□□□ -0.32
UBE2E3-204ENST00000602303 EIF4G3O43432 1585 aaKnown RBP13.07□□□□□ -0.32
UBE2E3-204ENST00000602303 TRHP20396 242 aaPredicted RBP13.06□□□□□ -0.32
UBE2E3-204ENST00000602303 ARAP1Q96P48 1450 aa13.05□□□□□ -0.32
UBE2E3-204ENST00000602303 DNMBPQ6XZF7 1577 aa13.02□□□□□ -0.33
UBE2E3-204ENST00000602303 CHD1O14646 1710 aa13□□□□□ -0.33
UBE2E3-204ENST00000602303 TARBP1Q13395 1621 aaKnown RBP12.99□□□□□ -0.33
UBE2E3-204ENST00000602303 CCDC88BA6NC98 1476 aa12.97□□□□□ -0.33
UBE2E3-204ENST00000602303 WDR97A6NE52 1622 aa12.96□□□□□ -0.33
UBE2E3-204ENST00000602303 AQRO60306 1485 aaKnown RBP eCLIP12.96□□□□□ -0.34
UBE2E3-204ENST00000602303 FBLN2P98095 1184 aa12.92□□□□□ -0.34
UBE2E3-204ENST00000602303 CLASP1Q7Z460 1538 aa12.92□□□□□ -0.34
UBE2E3-204ENST00000602303 POLA1P09884 1462 aaPredicted RBP12.91□□□□□ -0.34
UBE2E3-204ENST00000602303 SYNJ1O43426 1573 aa12.9□□□□□ -0.35
UBE2E3-204ENST00000602303 MAGI1Q96QZ7 1491 aaPredicted RBP12.88□□□□□ -0.35
UBE2E3-204ENST00000602303 SOGA1O94964 1423 aa12.85□□□□□ -0.35
UBE2E3-204ENST00000602303 CHMP7Q8WUX9 453 aaPredicted RBP12.84□□□□□ -0.35
UBE2E3-204ENST00000602303 SNAPC4Q5SXM2 1469 aa12.84□□□□□ -0.35
UBE2E3-204ENST00000602303 TDRD9Q8NDG6 1382 aaKnown RBP12.82□□□□□ -0.36
UBE2E3-204ENST00000602303 SYNJ2O15056 1496 aa12.82□□□□□ -0.36
UBE2E3-204ENST00000602303 GRIN2BQ13224 1484 aa12.81□□□□□ -0.36
UBE2E3-204ENST00000602303 RAD54L2Q9Y4B4 1467 aa12.81□□□□□ -0.36
UBE2E3-204ENST00000602303 GAPVD1Q14C86 1478 aa12.78□□□□□ -0.36
UBE2E3-204ENST00000602303 FGD5Q6ZNL6 1462 aa12.76□□□□□ -0.37
UBE2E3-204ENST00000602303 CUX1P39880 1505 aa12.69□□□□□ -0.38
UBE2E3-204ENST00000602303 PBRM1Q86U86 1689 aa12.67□□□□□ -0.38
UBE2E3-204ENST00000602303 ABCA10Q8WWZ4 1543 aa12.67□□□□□ -0.38
UBE2E3-204ENST00000602303 ABCA5Q8WWZ7 1642 aa12.64□□□□□ -0.39
UBE2E3-204ENST00000602303 NUP160Q12769 1436 aa12.63□□□□□ -0.39
UBE2E3-204ENST00000602303 MSH5O43196 834 aa12.63□□□□□ -0.39
UBE2E3-204ENST00000602303 GRIN2AQ12879 1464 aa12.63□□□□□ -0.39
UBE2E3-204ENST00000602303 CEP170Q5SW79 1584 aa12.61□□□□□ -0.39
UBE2E3-204ENST00000602303 SHROOM2Q13796 1616 aa12.61□□□□□ -0.39
UBE2E3-204ENST00000602303 KIF13AQ9H1H9 1805 aa12.58□□□□□ -0.4
UBE2E3-204ENST00000602303 ERCC6L2Q5T890 1561 aa12.57□□□□□ -0.4
UBE2E3-204ENST00000602303 ADAMTS12P58397 1594 aa12.56□□□□□ -0.4
UBE2E3-204ENST00000602303 FHAD1B1AJZ9 1412 aa12.55□□□□□ -0.4
UBE2E3-204ENST00000602303 POTEDQ86YR6 584 aa12.54□□□□□ -0.4
UBE2E3-204ENST00000602303 WRNQ14191 1432 aaPredicted RBP eCLIP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms