RNA–Protein interactions for RNA: ENST00000602291.5

UBE2E3-203, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

TSL 3

Gene UBE2E3, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-203ENST00000602291 NISCHQ9Y2I1 1504 aa23.38■■□□□ 1.33
UBE2E3-203ENST00000602291 AEBP2Q6ZN18 517 aaPredicted RBP20.95■□□□□ 0.94
UBE2E3-203ENST00000602291 CCDC180Q9P1Z9 1646 aa20.82■□□□□ 0.92
UBE2E3-203ENST00000602291 ABCC9O60706 1549 aa20.63■□□□□ 0.89
UBE2E3-203ENST00000602291 CHIC1Q5VXU3 224 aa19.88■□□□□ 0.77
UBE2E3-203ENST00000602291 DCAF8L2P0C7V8 631 aa19.72■□□□□ 0.75
UBE2E3-203ENST00000602291 RB1CC1Q8TDY2 1594 aa19.72■□□□□ 0.75
UBE2E3-203ENST00000602291 NACADO15069 1562 aa19.65■□□□□ 0.74
UBE2E3-203ENST00000602291 ZCCHC6Q5VYS8 1495 aaKnown RBP19.45■□□□□ 0.7
UBE2E3-203ENST00000602291 MYO15BQ96JP2 1530 aa19.44■□□□□ 0.7
UBE2E3-203ENST00000602291 DCAF1Q9Y4B6 1507 aa19.3■□□□□ 0.68
UBE2E3-203ENST00000602291 PABPN1Q86U42 306 aaKnown RBP eCLIP19.27■□□□□ 0.68
UBE2E3-203ENST00000602291 UNC13AQ9UPW8 1703 aa19.2■□□□□ 0.66
UBE2E3-203ENST00000602291 BICRAQ9NZM4 1560 aa19.1■□□□□ 0.65
UBE2E3-203ENST00000602291 SCRIBQ14160 1630 aa19.07■□□□□ 0.64
UBE2E3-203ENST00000602291 DNAJC5BQ9UF47 199 aa19.04■□□□□ 0.64
UBE2E3-203ENST00000602291 SHROOM4Q9ULL8 1493 aa18.88■□□□□ 0.61
UBE2E3-203ENST00000602291 EIF4G1Q04637 1599 aaKnown RBP18.64■□□□□ 0.57
UBE2E3-203ENST00000602291 CC2D2AQ9P2K1 1620 aa18.6■□□□□ 0.57
UBE2E3-203ENST00000602291 CECR2Q9BXF3 1484 aa18.53■□□□□ 0.56
UBE2E3-203ENST00000602291 SMARCA4P51532 1647 aa18.18■□□□□ 0.5
UBE2E3-203ENST00000602291 BAZ1AQ9NRL2 1556 aaPredicted RBP18.15■□□□□ 0.5
UBE2E3-203ENST00000602291 NCAPD3P42695 1498 aa18.14■□□□□ 0.49
UBE2E3-203ENST00000602291 ATAD2BQ9ULI0 1458 aa18.14■□□□□ 0.49
UBE2E3-203ENST00000602291 SMARCA2P51531 1590 aa18.1■□□□□ 0.49
UBE2E3-203ENST00000602291 MROH2BQ7Z745 1585 aa18.04■□□□□ 0.48
UBE2E3-203ENST00000602291 HMGXB3Q12766 1538 aa18.03■□□□□ 0.48
UBE2E3-203ENST00000602291 BAZ1BQ9UIG0 1483 aaKnown RBP18.01■□□□□ 0.47
UBE2E3-203ENST00000602291 PEG3Q9GZU2 1588 aa17.97■□□□□ 0.47
UBE2E3-203ENST00000602291 SENP3Q9H4L4 574 aaPredicted RBP17.89■□□□□ 0.45
UBE2E3-203ENST00000602291 WIZO95785 1651 aa17.83■□□□□ 0.44
UBE2E3-203ENST00000602291 ERCC6Q03468 1493 aa17.81■□□□□ 0.44
UBE2E3-203ENST00000602291 NESP48681 1621 aa17.79■□□□□ 0.44
UBE2E3-203ENST00000602291 RSF1Q96T23 1441 aaPredicted RBP17.78■□□□□ 0.44
UBE2E3-203ENST00000602291 LAMC3Q9Y6N6 1575 aa17.67■□□□□ 0.42
UBE2E3-203ENST00000602291 PHF23Q9BUL5 403 aaPredicted RBP17.64■□□□□ 0.41
UBE2E3-203ENST00000602291 TOP2AP11388 1531 aaKnown RBP17.63■□□□□ 0.41
UBE2E3-203ENST00000602291 CADPSQ9ULU8 1353 aa17.62■□□□□ 0.41
UBE2E3-203ENST00000602291 CUX2O14529 1486 aa17.62■□□□□ 0.41
UBE2E3-203ENST00000602291 PDS5BQ9NTI5 1447 aa17.6■□□□□ 0.41
UBE2E3-203ENST00000602291 KIF21AQ7Z4S6 1674 aa17.52■□□□□ 0.4
UBE2E3-203ENST00000602291 THOC2Q8NI27 1593 aaKnown RBP17.51■□□□□ 0.39
UBE2E3-203ENST00000602291 CFTRP13569 1480 aa17.46■□□□□ 0.39
UBE2E3-203ENST00000602291 CCDC88BA6NC98 1476 aa17.44■□□□□ 0.38
UBE2E3-203ENST00000602291 FANCD2Q9BXW9 1451 aa17.44■□□□□ 0.38
UBE2E3-203ENST00000602291 MRC2Q9UBG0 1479 aa17.43■□□□□ 0.38
UBE2E3-203ENST00000602291 CEP164Q9UPV0 1460 aa17.43■□□□□ 0.38
UBE2E3-203ENST00000602291 WDR62O43379 1518 aa17.35■□□□□ 0.37
UBE2E3-203ENST00000602291 SUPT5HO00267 1087 aaKnown RBP17.29■□□□□ 0.36
UBE2E3-203ENST00000602291 DNAJC5Q9H3Z4 198 aa17.27■□□□□ 0.36
UBE2E3-203ENST00000602291 URB2Q14146 1524 aaKnown RBP17.26■□□□□ 0.35
UBE2E3-203ENST00000602291 PRDM2Q13029 1718 aa17.25■□□□□ 0.35
UBE2E3-203ENST00000602291 TOPBP1Q92547 1522 aa17.12■□□□□ 0.33
UBE2E3-203ENST00000602291 ABCC8Q09428 1581 aa17.09■□□□□ 0.33
UBE2E3-203ENST00000602291 DNMBPQ6XZF7 1577 aa17.08■□□□□ 0.32
UBE2E3-203ENST00000602291 IFT140Q96RY7 1462 aa17.05■□□□□ 0.32
UBE2E3-203ENST00000602291 ZNF608Q9ULD9 1512 aaPredicted RBP17.01■□□□□ 0.31
UBE2E3-203ENST00000602291 POLA1P09884 1462 aaPredicted RBP16.97■□□□□ 0.31
UBE2E3-203ENST00000602291 CUX1P39880 1505 aa16.93■□□□□ 0.3
UBE2E3-203ENST00000602291 FGD5Q6ZNL6 1462 aa16.92■□□□□ 0.3
UBE2E3-203ENST00000602291 RAD54L2Q9Y4B4 1467 aa16.92■□□□□ 0.3
UBE2E3-203ENST00000602291 TARBP1Q13395 1621 aaKnown RBP16.92■□□□□ 0.3
UBE2E3-203ENST00000602291 EIF4G3O43432 1585 aaKnown RBP16.91■□□□□ 0.3
UBE2E3-203ENST00000602291 SOGA1O94964 1423 aa16.91■□□□□ 0.3
UBE2E3-203ENST00000602291 AQRO60306 1485 aaKnown RBP eCLIP16.89■□□□□ 0.29
UBE2E3-203ENST00000602291 OSCARQ8IYS5 282 aa16.89■□□□□ 0.29
UBE2E3-203ENST00000602291 TDRD9Q8NDG6 1382 aaKnown RBP16.86■□□□□ 0.29
UBE2E3-203ENST00000602291 WRNQ14191 1432 aaPredicted RBP eCLIP16.79■□□□□ 0.28
UBE2E3-203ENST00000602291 FBLN2P98095 1184 aa16.78■□□□□ 0.28
UBE2E3-203ENST00000602291 WDR97A6NE52 1622 aa16.76■□□□□ 0.27
UBE2E3-203ENST00000602291 SNAPC4Q5SXM2 1469 aa16.73■□□□□ 0.27
UBE2E3-203ENST00000602291 SYNJ1O43426 1573 aa16.73■□□□□ 0.27
UBE2E3-203ENST00000602291 GRIN2BQ13224 1484 aa16.73■□□□□ 0.27
UBE2E3-203ENST00000602291 TOP2BQ02880 1626 aa16.72■□□□□ 0.27
UBE2E3-203ENST00000602291 TRIM41Q8WV44 630 aa16.72■□□□□ 0.27
UBE2E3-203ENST00000602291 ABCA10Q8WWZ4 1543 aa16.71■□□□□ 0.27
UBE2E3-203ENST00000602291 BIVM-ERCC5R4GMW8 1640 aa16.71■□□□□ 0.27
UBE2E3-203ENST00000602291 CHD1O14646 1710 aa16.71■□□□□ 0.27
UBE2E3-203ENST00000602291 GAPVD1Q14C86 1478 aa16.71■□□□□ 0.27
UBE2E3-203ENST00000602291 MAGI1Q96QZ7 1491 aaPredicted RBP16.68■□□□□ 0.26
UBE2E3-203ENST00000602291 CHMP7Q8WUX9 453 aaPredicted RBP16.68■□□□□ 0.26
UBE2E3-203ENST00000602291 FOXD1Q16676 465 aa16.66■□□□□ 0.26
UBE2E3-203ENST00000602291 ABCA5Q8WWZ7 1642 aa16.66■□□□□ 0.26
UBE2E3-203ENST00000602291 PBRM1Q86U86 1689 aa16.64■□□□□ 0.25
UBE2E3-203ENST00000602291 SYNJ2O15056 1496 aa16.63■□□□□ 0.25
UBE2E3-203ENST00000602291 ARHGEF11O15085 1522 aa16.6■□□□□ 0.25
UBE2E3-203ENST00000602291 RIMBP3CA6NJZ7 1639 aa16.6■□□□□ 0.25
UBE2E3-203ENST00000602291 RIMBP3BA6NNM3 1639 aa16.6■□□□□ 0.25
UBE2E3-203ENST00000602291 RIMBP3Q9UFD9 1639 aa16.6■□□□□ 0.25
UBE2E3-203ENST00000602291 ADAMTS12P58397 1594 aa16.53■□□□□ 0.24
UBE2E3-203ENST00000602291 CLASP1Q7Z460 1538 aa16.53■□□□□ 0.24
UBE2E3-203ENST00000602291 ERICH3Q5RHP9 1530 aa16.51■□□□□ 0.23
UBE2E3-203ENST00000602291 GRIN2AQ12879 1464 aa16.51■□□□□ 0.23
UBE2E3-203ENST00000602291 FHAD1B1AJZ9 1412 aa16.51■□□□□ 0.23
UBE2E3-203ENST00000602291 CYB5RLQ6IPT4 315 aa16.5■□□□□ 0.23
UBE2E3-203ENST00000602291 ARAP1Q96P48 1450 aa16.46■□□□□ 0.23
UBE2E3-203ENST00000602291 KIF27Q86VH2 1401 aa16.45■□□□□ 0.22
UBE2E3-203ENST00000602291 NUP160Q12769 1436 aa16.42■□□□□ 0.22
UBE2E3-203ENST00000602291 CEP170Q5SW79 1584 aa16.42■□□□□ 0.22
UBE2E3-203ENST00000602291 IGF1RP08069 1367 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms