RNA–Protein interactions for RNA: ENST00000601927.1

NAPA-220, Transcript of NSF attachment protein alpha, humanhuman

TSL 3

Gene NAPA, Length 429 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NAPA-220ENST00000601927 NISCHQ9Y2I1 1504 aa15.34■□□□□ 0.05
NAPA-220ENST00000601927 ABCC9O60706 1549 aa14.46□□□□□ -0.1
NAPA-220ENST00000601927 DNAJC5BQ9UF47 199 aa13.93□□□□□ -0.18
NAPA-220ENST00000601927 CCDC180Q9P1Z9 1646 aa13.92□□□□□ -0.18
NAPA-220ENST00000601927 RB1CC1Q8TDY2 1594 aa13.52□□□□□ -0.25
NAPA-220ENST00000601927 PABPN1Q86U42 306 aaKnown RBP eCLIP13.41□□□□□ -0.26
NAPA-220ENST00000601927 NACADO15069 1562 aa13.3□□□□□ -0.28
NAPA-220ENST00000601927 DCAF8L2P0C7V8 631 aa13.25□□□□□ -0.29
NAPA-220ENST00000601927 DNAJC5Q9H3Z4 198 aa13.12□□□□□ -0.31
NAPA-220ENST00000601927 BICRAQ9NZM4 1560 aa13.11□□□□□ -0.31
NAPA-220ENST00000601927 UNC13AQ9UPW8 1703 aa13.1□□□□□ -0.31
NAPA-220ENST00000601927 CECR2Q9BXF3 1484 aa13.06□□□□□ -0.32
NAPA-220ENST00000601927 CC2D2AQ9P2K1 1620 aa12.99□□□□□ -0.33
NAPA-220ENST00000601927 MYO15BQ96JP2 1530 aa12.94□□□□□ -0.34
NAPA-220ENST00000601927 SHROOM4Q9ULL8 1493 aa12.91□□□□□ -0.34
NAPA-220ENST00000601927 EIF4G1Q04637 1599 aaKnown RBP12.85□□□□□ -0.35
NAPA-220ENST00000601927 SCRIBQ14160 1630 aa12.72□□□□□ -0.37
NAPA-220ENST00000601927 ZCCHC6Q5VYS8 1495 aaKnown RBP12.63□□□□□ -0.39
NAPA-220ENST00000601927 CUX2O14529 1486 aa12.62□□□□□ -0.39
NAPA-220ENST00000601927 DCAF1Q9Y4B6 1507 aa12.62□□□□□ -0.39
NAPA-220ENST00000601927 ERCC6Q03468 1493 aa12.54□□□□□ -0.4
NAPA-220ENST00000601927 TRIM41Q8WV44 630 aa12.44□□□□□ -0.42
NAPA-220ENST00000601927 NCAPD3P42695 1498 aa12.29□□□□□ -0.44
NAPA-220ENST00000601927 NESP48681 1621 aa12.27□□□□□ -0.44
NAPA-220ENST00000601927 ATAD2BQ9ULI0 1458 aa12.21□□□□□ -0.46
NAPA-220ENST00000601927 THOC2Q8NI27 1593 aaKnown RBP12.2□□□□□ -0.46
NAPA-220ENST00000601927 SMARCA2P51531 1590 aa12.17□□□□□ -0.46
NAPA-220ENST00000601927 SUPT5HO00267 1087 aaKnown RBP12.16□□□□□ -0.46
NAPA-220ENST00000601927 HMGXB3Q12766 1538 aa12.16□□□□□ -0.46
NAPA-220ENST00000601927 BAZ1BQ9UIG0 1483 aaKnown RBP12.08□□□□□ -0.47
NAPA-220ENST00000601927 LAMC3Q9Y6N6 1575 aa12.08□□□□□ -0.48
NAPA-220ENST00000601927 PDS5BQ9NTI5 1447 aa12.07□□□□□ -0.48
NAPA-220ENST00000601927 SMARCA4P51532 1647 aa12.06□□□□□ -0.48
NAPA-220ENST00000601927 KIF21AQ7Z4S6 1674 aa12.03□□□□□ -0.48
NAPA-220ENST00000601927 BAZ1AQ9NRL2 1556 aaPredicted RBP12□□□□□ -0.49
NAPA-220ENST00000601927 OSCARQ8IYS5 282 aa11.99□□□□□ -0.49
NAPA-220ENST00000601927 MRC2Q9UBG0 1479 aa11.99□□□□□ -0.49
NAPA-220ENST00000601927 WDR62O43379 1518 aa11.94□□□□□ -0.5
NAPA-220ENST00000601927 CADPSQ9ULU8 1353 aa11.92□□□□□ -0.5
NAPA-220ENST00000601927 PEG3Q9GZU2 1588 aa11.92□□□□□ -0.5
NAPA-220ENST00000601927 CHIC1Q5VXU3 224 aa11.9□□□□□ -0.5
NAPA-220ENST00000601927 CEP164Q9UPV0 1460 aa11.86□□□□□ -0.51
NAPA-220ENST00000601927 RIMBP3CA6NJZ7 1639 aa11.84□□□□□ -0.51
NAPA-220ENST00000601927 RIMBP3BA6NNM3 1639 aa11.84□□□□□ -0.51
NAPA-220ENST00000601927 RIMBP3Q9UFD9 1639 aa11.84□□□□□ -0.51
NAPA-220ENST00000601927 MROH2BQ7Z745 1585 aa11.83□□□□□ -0.52
NAPA-220ENST00000601927 TRHP20396 242 aaPredicted RBP11.81□□□□□ -0.52
NAPA-220ENST00000601927 AEBP2Q6ZN18 517 aaPredicted RBP11.81□□□□□ -0.52
NAPA-220ENST00000601927 FANCD2Q9BXW9 1451 aa11.8□□□□□ -0.52
NAPA-220ENST00000601927 ARHGEF11O15085 1522 aa11.79□□□□□ -0.52
NAPA-220ENST00000601927 CYB5RLQ6IPT4 315 aa11.76□□□□□ -0.53
NAPA-220ENST00000601927 URB2Q14146 1524 aaKnown RBP11.71□□□□□ -0.53
NAPA-220ENST00000601927 RSF1Q96T23 1441 aaPredicted RBP11.69□□□□□ -0.54
NAPA-220ENST00000601927 CFTRP13569 1480 aa11.68□□□□□ -0.54
NAPA-220ENST00000601927 ZNF608Q9ULD9 1512 aaPredicted RBP11.65□□□□□ -0.54
NAPA-220ENST00000601927 ARAP1Q96P48 1450 aa11.63□□□□□ -0.55
NAPA-220ENST00000601927 WIZO95785 1651 aa11.63□□□□□ -0.55
NAPA-220ENST00000601927 IFT140Q96RY7 1462 aa11.63□□□□□ -0.55
NAPA-220ENST00000601927 FBLN2P98095 1184 aa11.57□□□□□ -0.56
NAPA-220ENST00000601927 EIF4G3O43432 1585 aaKnown RBP11.54□□□□□ -0.56
NAPA-220ENST00000601927 HRCP23327 699 aa11.51□□□□□ -0.57
NAPA-220ENST00000601927 TOPBP1Q92547 1522 aa11.5□□□□□ -0.57
NAPA-220ENST00000601927 CHD1O14646 1710 aa11.5□□□□□ -0.57
NAPA-220ENST00000601927 AQRO60306 1485 aaKnown RBP eCLIP11.5□□□□□ -0.571e-6■■■■■ 28.9
NAPA-220ENST00000601927 TOP2AP11388 1531 aaKnown RBP11.48□□□□□ -0.57
NAPA-220ENST00000601927 ABCC8Q09428 1581 aa11.44□□□□□ -0.58
NAPA-220ENST00000601927 LOC105371045A0A1W2PR82 267 aa11.42□□□□□ -0.58
NAPA-220ENST00000601927 PCGF6Q9BYE7 350 aa11.42□□□□□ -0.58
NAPA-220ENST00000601927 PRDM2Q13029 1718 aa11.42□□□□□ -0.58
NAPA-220ENST00000601927 DNMBPQ6XZF7 1577 aa11.41□□□□□ -0.58
NAPA-220ENST00000601927 TARBP1Q13395 1621 aaKnown RBP11.41□□□□□ -0.58
NAPA-220ENST00000601927 CLASP1Q7Z460 1538 aa11.4□□□□□ -0.59
NAPA-220ENST00000601927 CHMP7Q8WUX9 453 aaPredicted RBP11.39□□□□□ -0.59
NAPA-220ENST00000601927 SNAPC4Q5SXM2 1469 aa11.38□□□□□ -0.59
NAPA-220ENST00000601927 TDRD9Q8NDG6 1382 aaKnown RBP11.37□□□□□ -0.59
NAPA-220ENST00000601927 POLA1P09884 1462 aaPredicted RBP11.37□□□□□ -0.59
NAPA-220ENST00000601927 SYNJ1O43426 1573 aa11.37□□□□□ -0.59
NAPA-220ENST00000601927 CCDC88BA6NC98 1476 aa11.36□□□□□ -0.59
NAPA-220ENST00000601927 GAPVD1Q14C86 1478 aa11.35□□□□□ -0.59
NAPA-220ENST00000601927 RAD54L2Q9Y4B4 1467 aa11.34□□□□□ -0.59
NAPA-220ENST00000601927 TRIM26Q12899 539 aaPredicted RBP11.33□□□□□ -0.6
NAPA-220ENST00000601927 ILDR1Q86SU0 546 aaPredicted RBP11.32□□□□□ -0.6
NAPA-220ENST00000601927 SOGA1O94964 1423 aa11.32□□□□□ -0.6
NAPA-220ENST00000601927 MAGI1Q96QZ7 1491 aaPredicted RBP11.31□□□□□ -0.6
NAPA-220ENST00000601927 SYNJ2O15056 1496 aa11.28□□□□□ -0.6
NAPA-220ENST00000601927 GRIN2BQ13224 1484 aa11.27□□□□□ -0.6
NAPA-220ENST00000601927 WDR97A6NE52 1622 aa11.25□□□□□ -0.61
NAPA-220ENST00000601927 FGD5Q6ZNL6 1462 aa11.24□□□□□ -0.61
NAPA-220ENST00000601927 FAM9AQ8IZU1 332 aaPredicted RBP11.2□□□□□ -0.62
NAPA-220ENST00000601927 ERCC6L2Q5T890 1561 aa11.2□□□□□ -0.62
NAPA-220ENST00000601927 KDM4FA0A1W2PPD8 638 aa11.17□□□□□ -0.62
NAPA-220ENST00000601927 ZEB1P37275 1124 aaPredicted RBP11.17□□□□□ -0.62
NAPA-220ENST00000601927 FAM69CQ0P6D2 419 aa11.14□□□□□ -0.63
NAPA-220ENST00000601927 EEA1Q15075 1411 aa11.14□□□□□ -0.63
NAPA-220ENST00000601927 CUX1P39880 1505 aa11.14□□□□□ -0.63
NAPA-220ENST00000601927 CEP170Q5SW79 1584 aa11.13□□□□□ -0.63
NAPA-220ENST00000601927 PBRM1Q86U86 1689 aa11.13□□□□□ -0.63
NAPA-220ENST00000601927 KIF13AQ9H1H9 1805 aa11.12□□□□□ -0.63
NAPA-220ENST00000601927 PPARGC1BQ86YN6 1023 aaKnown RBP11.12□□□□□ -0.63
NAPA-220ENST00000601927 GRIN2AQ12879 1464 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 165.1 ms