RNA–Protein interactions for RNA: ENST00000601306.1

RPS11-208, Transcript of ribosomal protein S11, humanhuman

TSL 3

Gene RPS11, Length 547 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS11-208ENST00000601306 NISCHQ9Y2I1 1504 aa17.42■□□□□ 0.38
RPS11-208ENST00000601306 ABCC9O60706 1549 aa16.86■□□□□ 0.29
RPS11-208ENST00000601306 DNAJC5BQ9UF47 199 aa16.72■□□□□ 0.27
RPS11-208ENST00000601306 DNAJC5Q9H3Z4 198 aa16.06■□□□□ 0.16
RPS11-208ENST00000601306 CCDC180Q9P1Z9 1646 aa15.87■□□□□ 0.13
RPS11-208ENST00000601306 RB1CC1Q8TDY2 1594 aa15.6■□□□□ 0.09
RPS11-208ENST00000601306 PABPN1Q86U42 306 aaKnown RBP eCLIP15.55■□□□□ 0.08
RPS11-208ENST00000601306 CECR2Q9BXF3 1484 aa15.3■□□□□ 0.04
RPS11-208ENST00000601306 NACADO15069 1562 aa15.27■□□□□ 0.03
RPS11-208ENST00000601306 BICRAQ9NZM4 1560 aa15.2■□□□□ 0.02
RPS11-208ENST00000601306 UNC13AQ9UPW8 1703 aa15.2■□□□□ 0.02
RPS11-208ENST00000601306 CC2D2AQ9P2K1 1620 aa15.17■□□□□ 0.02
RPS11-208ENST00000601306 DCAF8L2P0C7V8 631 aa14.99□□□□□ -0.01
RPS11-208ENST00000601306 CUX2O14529 1486 aa14.94□□□□□ -0.02
RPS11-208ENST00000601306 TRIM41Q8WV44 630 aa14.93□□□□□ -0.02
RPS11-208ENST00000601306 EIF4G1Q04637 1599 aaKnown RBP14.9□□□□□ -0.02
RPS11-208ENST00000601306 SHROOM4Q9ULL8 1493 aa14.9□□□□□ -0.02
RPS11-208ENST00000601306 MYO15BQ96JP2 1530 aa14.76□□□□□ -0.05
RPS11-208ENST00000601306 ZCCHC6Q5VYS8 1495 aaKnown RBP14.66□□□□□ -0.06
RPS11-208ENST00000601306 ERCC6Q03468 1493 aa14.62□□□□□ -0.07
RPS11-208ENST00000601306 SCRIBQ14160 1630 aa14.44□□□□□ -0.1
RPS11-208ENST00000601306 DCAF1Q9Y4B6 1507 aa14.38□□□□□ -0.11
RPS11-208ENST00000601306 AEBP2Q6ZN18 517 aaPredicted RBP14.29□□□□□ -0.12
RPS11-208ENST00000601306 THOC2Q8NI27 1593 aaKnown RBP14.25□□□□□ -0.13
RPS11-208ENST00000601306 NESP48681 1621 aa14.2□□□□□ -0.14
RPS11-208ENST00000601306 NCAPD3P42695 1498 aa14.14□□□□□ -0.15
RPS11-208ENST00000601306 OSCARQ8IYS5 282 aa14.1□□□□□ -0.15
RPS11-208ENST00000601306 SMARCA2P51531 1590 aa14.05□□□□□ -0.16
RPS11-208ENST00000601306 BAZ1AQ9NRL2 1556 aaPredicted RBP14.05□□□□□ -0.16
RPS11-208ENST00000601306 TRHP20396 242 aaPredicted RBP13.99□□□□□ -0.17
RPS11-208ENST00000601306 RIMBP3CA6NJZ7 1639 aa13.99□□□□□ -0.17
RPS11-208ENST00000601306 RIMBP3BA6NNM3 1639 aa13.99□□□□□ -0.17
RPS11-208ENST00000601306 RIMBP3Q9UFD9 1639 aa13.99□□□□□ -0.17
RPS11-208ENST00000601306 KIF21AQ7Z4S6 1674 aa13.95□□□□□ -0.18
RPS11-208ENST00000601306 ATAD2BQ9ULI0 1458 aa13.94□□□□□ -0.18
RPS11-208ENST00000601306 LAMC3Q9Y6N6 1575 aa13.94□□□□□ -0.18
RPS11-208ENST00000601306 HMGXB3Q12766 1538 aa13.92□□□□□ -0.18
RPS11-208ENST00000601306 PDS5BQ9NTI5 1447 aa13.91□□□□□ -0.18
RPS11-208ENST00000601306 ILDR1Q86SU0 546 aaPredicted RBP13.91□□□□□ -0.18
RPS11-208ENST00000601306 ARHGEF11O15085 1522 aa13.87□□□□□ -0.19
RPS11-208ENST00000601306 WDR62O43379 1518 aa13.85□□□□□ -0.19
RPS11-208ENST00000601306 CYB5RLQ6IPT4 315 aa13.84□□□□□ -0.19
RPS11-208ENST00000601306 MRC2Q9UBG0 1479 aa13.84□□□□□ -0.19
RPS11-208ENST00000601306 BAZ1BQ9UIG0 1483 aaKnown RBP13.74□□□□□ -0.21
RPS11-208ENST00000601306 ARAP1Q96P48 1450 aa13.67□□□□□ -0.22
RPS11-208ENST00000601306 SMARCA4P51532 1647 aa13.66□□□□□ -0.22
RPS11-208ENST00000601306 CADPSQ9ULU8 1353 aa13.66□□□□□ -0.22
RPS11-208ENST00000601306 SUPT5HO00267 1087 aaKnown RBP13.59□□□□□ -0.23
RPS11-208ENST00000601306 CEP164Q9UPV0 1460 aa13.58□□□□□ -0.24
RPS11-208ENST00000601306 PEG3Q9GZU2 1588 aa13.55□□□□□ -0.24
RPS11-208ENST00000601306 RSF1Q96T23 1441 aaPredicted RBP13.49□□□□□ -0.25
RPS11-208ENST00000601306 MROH2BQ7Z745 1585 aa13.49□□□□□ -0.25
RPS11-208ENST00000601306 FANCD2Q9BXW9 1451 aa13.48□□□□□ -0.25
RPS11-208ENST00000601306 URB2Q14146 1524 aaKnown RBP13.44□□□□□ -0.26
RPS11-208ENST00000601306 ZNF608Q9ULD9 1512 aaPredicted RBP13.44□□□□□ -0.26
RPS11-208ENST00000601306 WIZO95785 1651 aa13.42□□□□□ -0.26
RPS11-208ENST00000601306 IFT140Q96RY7 1462 aa13.36□□□□□ -0.27
RPS11-208ENST00000601306 CHD1O14646 1710 aa13.34□□□□□ -0.27
RPS11-208ENST00000601306 KDM4FA0A1W2PPD8 638 aa13.32□□□□□ -0.28
RPS11-208ENST00000601306 CFTRP13569 1480 aa13.29□□□□□ -0.28
RPS11-208ENST00000601306 FBLN2P98095 1184 aa13.29□□□□□ -0.28
RPS11-208ENST00000601306 EIF4G3O43432 1585 aaKnown RBP13.28□□□□□ -0.28
RPS11-208ENST00000601306 TOP2AP11388 1531 aaKnown RBP13.24□□□□□ -0.29
RPS11-208ENST00000601306 CLASP1Q7Z460 1538 aa13.21□□□□□ -0.29
RPS11-208ENST00000601306 AQRO60306 1485 aaKnown RBP eCLIP13.2□□□□□ -0.3not detected■■■■■ 69
RPS11-208ENST00000601306 FBXO41Q8TF61 875 aa13.19□□□□□ -0.3
RPS11-208ENST00000601306 GAPVD1Q14C86 1478 aa13.16□□□□□ -0.3
RPS11-208ENST00000601306 ERCC6L2Q5T890 1561 aa13.16□□□□□ -0.3
RPS11-208ENST00000601306 LMTK3Q96Q04 1460 aa13.14□□□□□ -0.31
RPS11-208ENST00000601306 TOPBP1Q92547 1522 aa13.12□□□□□ -0.31
RPS11-208ENST00000601306 SYNJ1O43426 1573 aa13.1□□□□□ -0.31
RPS11-208ENST00000601306 HECW2Q9P2P5 1572 aa13.09□□□□□ -0.31
RPS11-208ENST00000601306 SOCS7O14512 581 aa13.08□□□□□ -0.32
RPS11-208ENST00000601306 KIF13AQ9H1H9 1805 aa13.08□□□□□ -0.32
RPS11-208ENST00000601306 TARBP1Q13395 1621 aaKnown RBP13.07□□□□□ -0.32
RPS11-208ENST00000601306 CCDC88BA6NC98 1476 aa13.07□□□□□ -0.32
RPS11-208ENST00000601306 CHMP7Q8WUX9 453 aaPredicted RBP13.05□□□□□ -0.32
RPS11-208ENST00000601306 CHIC1Q5VXU3 224 aa13.03□□□□□ -0.32
RPS11-208ENST00000601306 ABCC8Q09428 1581 aa13.03□□□□□ -0.32
RPS11-208ENST00000601306 SNAPC4Q5SXM2 1469 aa13.02□□□□□ -0.33
RPS11-208ENST00000601306 ILDR2Q71H61 639 aa12.99□□□□□ -0.33
RPS11-208ENST00000601306 PRDM2Q13029 1718 aa12.99□□□□□ -0.33
RPS11-208ENST00000601306 DNMBPQ6XZF7 1577 aa12.98□□□□□ -0.33
RPS11-208ENST00000601306 KDM6BO15054 1643 aa12.97□□□□□ -0.33
RPS11-208ENST00000601306 TDRD9Q8NDG6 1382 aaKnown RBP12.96□□□□□ -0.33
RPS11-208ENST00000601306 ADGRL1O94910 1474 aa12.96□□□□□ -0.34
RPS11-208ENST00000601306 FAM69CQ0P6D2 419 aa12.95□□□□□ -0.34
RPS11-208ENST00000601306 SYNJ2O15056 1496 aa12.95□□□□□ -0.34
RPS11-208ENST00000601306 MAGI1Q96QZ7 1491 aaPredicted RBP12.95□□□□□ -0.34
RPS11-208ENST00000601306 POLA1P09884 1462 aaPredicted RBP12.93□□□□□ -0.34
RPS11-208ENST00000601306 ABCC10Q5T3U5 1492 aa12.92□□□□□ -0.34
RPS11-208ENST00000601306 RAD54L2Q9Y4B4 1467 aa12.91□□□□□ -0.34
RPS11-208ENST00000601306 DISP3Q9P2K9 1392 aa12.86□□□□□ -0.35
RPS11-208ENST00000601306 WDR97A6NE52 1622 aa12.86□□□□□ -0.35
RPS11-208ENST00000601306 SOGA1O94964 1423 aa12.85□□□□□ -0.35
RPS11-208ENST00000601306 GRIN2BQ13224 1484 aa12.85□□□□□ -0.35
RPS11-208ENST00000601306 DIP2BQ9P265 1576 aa12.84□□□□□ -0.35
RPS11-208ENST00000601306 CEP170Q5SW79 1584 aa12.81□□□□□ -0.36
RPS11-208ENST00000601306 MAPKBP1O60336 1514 aa12.79□□□□□ -0.36
RPS11-208ENST00000601306 NPM1P06748 294 aaKnown RBP eCLIP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms