RNA–Protein interactions for RNA: ENST00000600077.5

HOMER3-212, Transcript of homer scaffold protein 3, humanhuman

TSL 3

Gene HOMER3, Length 675 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-212ENST00000600077 NISCHQ9Y2I1 1504 aa35.35■■■■□ 3.25
HOMER3-212ENST00000600077 ABCC9O60706 1549 aa32.94■■■□□ 2.86
HOMER3-212ENST00000600077 CCDC180Q9P1Z9 1646 aa32.11■■■□□ 2.73
HOMER3-212ENST00000600077 DNAJC5BQ9UF47 199 aa31.67■■■□□ 2.66
HOMER3-212ENST00000600077 RB1CC1Q8TDY2 1594 aa31.03■■■□□ 2.56
HOMER3-212ENST00000600077 NACADO15069 1562 aa30.62■■■□□ 2.49
HOMER3-212ENST00000600077 PABPN1Q86U42 306 aaKnown RBP eCLIP30.53■■■□□ 2.48
HOMER3-212ENST00000600077 DCAF8L2P0C7V8 631 aa30.25■■■□□ 2.43
HOMER3-212ENST00000600077 UNC13AQ9UPW8 1703 aa30.19■■■□□ 2.42
HOMER3-212ENST00000600077 BICRAQ9NZM4 1560 aa30.07■■■□□ 2.4
HOMER3-212ENST00000600077 MYO15BQ96JP2 1530 aa29.93■■■□□ 2.38
HOMER3-212ENST00000600077 DNAJC5Q9H3Z4 198 aa29.85■■■□□ 2.37
HOMER3-212ENST00000600077 CECR2Q9BXF3 1484 aa29.81■■■□□ 2.36
HOMER3-212ENST00000600077 SHROOM4Q9ULL8 1493 aa29.73■■■□□ 2.35
HOMER3-212ENST00000600077 CC2D2AQ9P2K1 1620 aa29.72■■■□□ 2.35
HOMER3-212ENST00000600077 EIF4G1Q04637 1599 aaKnown RBP29.45■■■□□ 2.31
HOMER3-212ENST00000600077 DCAF1Q9Y4B6 1507 aa29.2■■■□□ 2.26
HOMER3-212ENST00000600077 SCRIBQ14160 1630 aa29.13■■■□□ 2.25
HOMER3-212ENST00000600077 ZCCHC6Q5VYS8 1495 aaKnown RBP29.09■■■□□ 2.25
HOMER3-212ENST00000600077 CUX2O14529 1486 aa28.85■■■□□ 2.21
HOMER3-212ENST00000600077 ERCC6Q03468 1493 aa28.57■■■□□ 2.16
HOMER3-212ENST00000600077 NCAPD3P42695 1498 aa28.27■■■□□ 2.12
HOMER3-212ENST00000600077 TRIM41Q8WV44 630 aa28.12■■■□□ 2.09
HOMER3-212ENST00000600077 ATAD2BQ9ULI0 1458 aa28.02■■■□□ 2.08
HOMER3-212ENST00000600077 NESP48681 1621 aa28.01■■■□□ 2.07
HOMER3-212ENST00000600077 HMGXB3Q12766 1538 aa27.96■■■□□ 2.07
HOMER3-212ENST00000600077 SMARCA2P51531 1590 aa27.93■■■□□ 2.06
HOMER3-212ENST00000600077 THOC2Q8NI27 1593 aaKnown RBP27.92■■■□□ 2.06
HOMER3-212ENST00000600077 LAMC3Q9Y6N6 1575 aa27.77■■■□□ 2.04
HOMER3-212ENST00000600077 SMARCA4P51532 1647 aa27.74■■■□□ 2.03
HOMER3-212ENST00000600077 BAZ1BQ9UIG0 1483 aaKnown RBP27.71■■■□□ 2.03
HOMER3-212ENST00000600077 PDS5BQ9NTI5 1447 aa27.68■■■□□ 2.02
HOMER3-212ENST00000600077 KIF21AQ7Z4S6 1674 aa27.61■■■□□ 2.01
HOMER3-212ENST00000600077 BAZ1AQ9NRL2 1556 aaPredicted RBP27.52■■■□□ 2
HOMER3-212ENST00000600077 PEG3Q9GZU2 1588 aa27.52■■■□□ 2
HOMER3-212ENST00000600077 MRC2Q9UBG0 1479 aa27.44■■□□□ 1.98
HOMER3-212ENST00000600077 OSCARQ8IYS5 282 aa27.42■■□□□ 1.98
HOMER3-212ENST00000600077 WDR62O43379 1518 aa27.38■■□□□ 1.97
HOMER3-212ENST00000600077 CADPSQ9ULU8 1353 aa27.37■■□□□ 1.97
HOMER3-212ENST00000600077 MROH2BQ7Z745 1585 aa27.18■■□□□ 1.94
HOMER3-212ENST00000600077 CEP164Q9UPV0 1460 aa27.15■■□□□ 1.94
HOMER3-212ENST00000600077 RIMBP3CA6NJZ7 1639 aa27.04■■□□□ 1.92
HOMER3-212ENST00000600077 RIMBP3BA6NNM3 1639 aa27.04■■□□□ 1.92
HOMER3-212ENST00000600077 RIMBP3Q9UFD9 1639 aa27.04■■□□□ 1.92
HOMER3-212ENST00000600077 FANCD2Q9BXW9 1451 aa27.03■■□□□ 1.92
HOMER3-212ENST00000600077 ARHGEF11O15085 1522 aa26.89■■□□□ 1.89
HOMER3-212ENST00000600077 CFTRP13569 1480 aa26.86■■□□□ 1.89
HOMER3-212ENST00000600077 URB2Q14146 1524 aaKnown RBP26.82■■□□□ 1.88
HOMER3-212ENST00000600077 TRHP20396 242 aaPredicted RBP26.8■■□□□ 1.88
HOMER3-212ENST00000600077 WIZO95785 1651 aa26.79■■□□□ 1.88
HOMER3-212ENST00000600077 CYB5RLQ6IPT4 315 aa26.78■■□□□ 1.88
HOMER3-212ENST00000600077 AEBP2Q6ZN18 517 aaPredicted RBP26.72■■□□□ 1.87
HOMER3-212ENST00000600077 IFT140Q96RY7 1462 aa26.67■■□□□ 1.86
HOMER3-212ENST00000600077 ZNF608Q9ULD9 1512 aaPredicted RBP26.63■■□□□ 1.85
HOMER3-212ENST00000600077 ARAP1Q96P48 1450 aa26.54■■□□□ 1.84
HOMER3-212ENST00000600077 RSF1Q96T23 1441 aaPredicted RBP26.48■■□□□ 1.83
HOMER3-212ENST00000600077 PRDM2Q13029 1718 aa26.45■■□□□ 1.83
HOMER3-212ENST00000600077 TOP2AP11388 1531 aaKnown RBP26.44■■□□□ 1.82
HOMER3-212ENST00000600077 EIF4G3O43432 1585 aaKnown RBP26.44■■□□□ 1.82
HOMER3-212ENST00000600077 TOPBP1Q92547 1522 aa26.4■■□□□ 1.82
HOMER3-212ENST00000600077 CHD1O14646 1710 aa26.39■■□□□ 1.82
HOMER3-212ENST00000600077 ABCC8Q09428 1581 aa26.39■■□□□ 1.82
HOMER3-212ENST00000600077 FBLN2P98095 1184 aa26.36■■□□□ 1.81
HOMER3-212ENST00000600077 AQRO60306 1485 aaKnown RBP eCLIP26.3■■□□□ 1.8
HOMER3-212ENST00000600077 DNMBPQ6XZF7 1577 aa26.24■■□□□ 1.79
HOMER3-212ENST00000600077 TARBP1Q13395 1621 aaKnown RBP26.21■■□□□ 1.79
HOMER3-212ENST00000600077 CCDC88BA6NC98 1476 aa26.15■■□□□ 1.78
HOMER3-212ENST00000600077 CLASP1Q7Z460 1538 aa26.11■■□□□ 1.77
HOMER3-212ENST00000600077 POLA1P09884 1462 aaPredicted RBP26.07■■□□□ 1.76
HOMER3-212ENST00000600077 SYNJ1O43426 1573 aa26.07■■□□□ 1.76
HOMER3-212ENST00000600077 CHMP7Q8WUX9 453 aaPredicted RBP26.06■■□□□ 1.76
HOMER3-212ENST00000600077 SNAPC4Q5SXM2 1469 aa26.01■■□□□ 1.75
HOMER3-212ENST00000600077 TDRD9Q8NDG6 1382 aaKnown RBP26.01■■□□□ 1.75
HOMER3-212ENST00000600077 SOGA1O94964 1423 aa25.98■■□□□ 1.75
HOMER3-212ENST00000600077 WDR97A6NE52 1622 aa25.98■■□□□ 1.75
HOMER3-212ENST00000600077 RAD54L2Q9Y4B4 1467 aa25.97■■□□□ 1.75
HOMER3-212ENST00000600077 MAGI1Q96QZ7 1491 aaPredicted RBP25.96■■□□□ 1.75
HOMER3-212ENST00000600077 GAPVD1Q14C86 1478 aa25.93■■□□□ 1.74
HOMER3-212ENST00000600077 SYNJ2O15056 1496 aa25.88■■□□□ 1.73
HOMER3-212ENST00000600077 GRIN2BQ13224 1484 aa25.86■■□□□ 1.73
HOMER3-212ENST00000600077 FGD5Q6ZNL6 1462 aa25.78■■□□□ 1.72
HOMER3-212ENST00000600077 PBRM1Q86U86 1689 aa25.61■■□□□ 1.69
HOMER3-212ENST00000600077 CUX1P39880 1505 aa25.59■■□□□ 1.69
HOMER3-212ENST00000600077 ILDR1Q86SU0 546 aaPredicted RBP25.59■■□□□ 1.69
HOMER3-212ENST00000600077 ERCC6L2Q5T890 1561 aa25.57■■□□□ 1.68
HOMER3-212ENST00000600077 KIF13AQ9H1H9 1805 aa25.54■■□□□ 1.68
HOMER3-212ENST00000600077 CEP170Q5SW79 1584 aa25.52■■□□□ 1.68
HOMER3-212ENST00000600077 GRIN2AQ12879 1464 aa25.5■■□□□ 1.67
HOMER3-212ENST00000600077 ABCA10Q8WWZ4 1543 aa25.47■■□□□ 1.67
HOMER3-212ENST00000600077 NUP160Q12769 1436 aa25.46■■□□□ 1.67
HOMER3-212ENST00000600077 ABCA5Q8WWZ7 1642 aa25.46■■□□□ 1.67
HOMER3-212ENST00000600077 KDM4FA0A1W2PPD8 638 aa25.43■■□□□ 1.66
HOMER3-212ENST00000600077 FAM69CQ0P6D2 419 aa25.42■■□□□ 1.66
HOMER3-212ENST00000600077 SHROOM2Q13796 1616 aa25.41■■□□□ 1.66
HOMER3-212ENST00000600077 ABCC10Q5T3U5 1492 aa25.38■■□□□ 1.65
HOMER3-212ENST00000600077 NPM1P06748 294 aaKnown RBP eCLIP25.36■■□□□ 1.65
HOMER3-212ENST00000600077 ADAMTS12P58397 1594 aa25.34■■□□□ 1.65
HOMER3-212ENST00000600077 FHAD1B1AJZ9 1412 aa25.3■■□□□ 1.64
HOMER3-212ENST00000600077 PRG4Q92954 1404 aaPredicted RBP25.29■■□□□ 1.64
HOMER3-212ENST00000600077 KDM6BO15054 1643 aa25.29■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms