RNA–Protein interactions for RNA: ENST00000597987.5

CAPN12-209, Transcript of calpain 12, humanhuman

TSL 5

Gene CAPN12, Length 896 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN12-209ENST00000597987 NISCHQ9Y2I1 1504 aa31.27■■■□□ 2.6
CAPN12-209ENST00000597987 ABCC9O60706 1549 aa29.03■■■□□ 2.24
CAPN12-209ENST00000597987 CCDC180Q9P1Z9 1646 aa28.33■■■□□ 2.13
CAPN12-209ENST00000597987 DNAJC5BQ9UF47 199 aa27.9■■■□□ 2.06
CAPN12-209ENST00000597987 RB1CC1Q8TDY2 1594 aa27.25■■□□□ 1.95
CAPN12-209ENST00000597987 PABPN1Q86U42 306 aaKnown RBP eCLIP26.91■■□□□ 1.93e-7■■■■□ 22.5
CAPN12-209ENST00000597987 NACADO15069 1562 aa26.9■■□□□ 1.9
CAPN12-209ENST00000597987 UNC13AQ9UPW8 1703 aa26.82■■□□□ 1.88
CAPN12-209ENST00000597987 BICRAQ9NZM4 1560 aa26.65■■□□□ 1.86
CAPN12-209ENST00000597987 DCAF8L2P0C7V8 631 aa26.57■■□□□ 1.84
CAPN12-209ENST00000597987 MYO15BQ96JP2 1530 aa26.29■■□□□ 1.8
CAPN12-209ENST00000597987 CC2D2AQ9P2K1 1620 aa26.2■■□□□ 1.78
CAPN12-209ENST00000597987 CECR2Q9BXF3 1484 aa26.17■■□□□ 1.78
CAPN12-209ENST00000597987 SHROOM4Q9ULL8 1493 aa26■■□□□ 1.75
CAPN12-209ENST00000597987 EIF4G1Q04637 1599 aaKnown RBP25.96■■□□□ 1.75
CAPN12-209ENST00000597987 DNAJC5Q9H3Z4 198 aa25.96■■□□□ 1.75
CAPN12-209ENST00000597987 SCRIBQ14160 1630 aa25.85■■□□□ 1.73
CAPN12-209ENST00000597987 ZCCHC6Q5VYS8 1495 aaKnown RBP25.79■■□□□ 1.72
CAPN12-209ENST00000597987 DCAF1Q9Y4B6 1507 aa25.73■■□□□ 1.71
CAPN12-209ENST00000597987 CUX2O14529 1486 aa25.2■■□□□ 1.62
CAPN12-209ENST00000597987 ERCC6Q03468 1493 aa25.01■■□□□ 1.59
CAPN12-209ENST00000597987 NCAPD3P42695 1498 aa24.86■■□□□ 1.57
CAPN12-209ENST00000597987 NESP48681 1621 aa24.81■■□□□ 1.56
CAPN12-209ENST00000597987 ATAD2BQ9ULI0 1458 aa24.73■■□□□ 1.55
CAPN12-209ENST00000597987 THOC2Q8NI27 1593 aaKnown RBP24.68■■□□□ 1.54
CAPN12-209ENST00000597987 HMGXB3Q12766 1538 aa24.63■■□□□ 1.53
CAPN12-209ENST00000597987 SMARCA4P51532 1647 aa24.56■■□□□ 1.52
CAPN12-209ENST00000597987 SMARCA2P51531 1590 aa24.55■■□□□ 1.52
CAPN12-209ENST00000597987 TRIM41Q8WV44 630 aa24.55■■□□□ 1.52
CAPN12-209ENST00000597987 KIF21AQ7Z4S6 1674 aa24.46■■□□□ 1.51
CAPN12-209ENST00000597987 BAZ1BQ9UIG0 1483 aaKnown RBP24.41■■□□□ 1.5
CAPN12-209ENST00000597987 LAMC3Q9Y6N6 1575 aa24.4■■□□□ 1.5
CAPN12-209ENST00000597987 PEG3Q9GZU2 1588 aa24.31■■□□□ 1.48
CAPN12-209ENST00000597987 BAZ1AQ9NRL2 1556 aaPredicted RBP24.26■■□□□ 1.47
CAPN12-209ENST00000597987 PDS5BQ9NTI5 1447 aa24.21■■□□□ 1.47
CAPN12-209ENST00000597987 MROH2BQ7Z745 1585 aa24.15■■□□□ 1.46
CAPN12-209ENST00000597987 WDR62O43379 1518 aa24.13■■□□□ 1.45
CAPN12-209ENST00000597987 MRC2Q9UBG0 1479 aa24.13■■□□□ 1.45
CAPN12-209ENST00000597987 CADPSQ9ULU8 1353 aa24.04■■□□□ 1.44
CAPN12-209ENST00000597987 CEP164Q9UPV0 1460 aa23.88■■□□□ 1.41
CAPN12-209ENST00000597987 OSCARQ8IYS5 282 aa23.87■■□□□ 1.41
CAPN12-209ENST00000597987 WIZO95785 1651 aa23.85■■□□□ 1.41
CAPN12-209ENST00000597987 FANCD2Q9BXW9 1451 aa23.82■■□□□ 1.4
CAPN12-209ENST00000597987 RIMBP3CA6NJZ7 1639 aa23.81■■□□□ 1.4
CAPN12-209ENST00000597987 RIMBP3BA6NNM3 1639 aa23.81■■□□□ 1.4
CAPN12-209ENST00000597987 RIMBP3Q9UFD9 1639 aa23.81■■□□□ 1.4
CAPN12-209ENST00000597987 URB2Q14146 1524 aaKnown RBP23.74■■□□□ 1.39
CAPN12-209ENST00000597987 CFTRP13569 1480 aa23.68■■□□□ 1.38
CAPN12-209ENST00000597987 ARHGEF11O15085 1522 aa23.64■■□□□ 1.37
CAPN12-209ENST00000597987 ZNF608Q9ULD9 1512 aaPredicted RBP23.57■■□□□ 1.36
CAPN12-209ENST00000597987 PRDM2Q13029 1718 aa23.42■■□□□ 1.34
CAPN12-209ENST00000597987 CYB5RLQ6IPT4 315 aa23.42■■□□□ 1.34
CAPN12-209ENST00000597987 TOP2AP11388 1531 aaKnown RBP23.42■■□□□ 1.34
CAPN12-209ENST00000597987 IFT140Q96RY7 1462 aa23.41■■□□□ 1.34
CAPN12-209ENST00000597987 ARAP1Q96P48 1450 aa23.39■■□□□ 1.34
CAPN12-209ENST00000597987 EIF4G3O43432 1585 aaKnown RBP23.39■■□□□ 1.33
CAPN12-209ENST00000597987 CHD1O14646 1710 aa23.36■■□□□ 1.33
CAPN12-209ENST00000597987 RSF1Q96T23 1441 aaPredicted RBP23.35■■□□□ 1.33
CAPN12-209ENST00000597987 TRHP20396 242 aaPredicted RBP23.32■■□□□ 1.32
CAPN12-209ENST00000597987 TOPBP1Q92547 1522 aa23.32■■□□□ 1.32
CAPN12-209ENST00000597987 AQRO60306 1485 aaKnown RBP eCLIP23.22■■□□□ 1.317e-8■□□□□ 9.3
CAPN12-209ENST00000597987 TARBP1Q13395 1621 aaKnown RBP23.22■■□□□ 1.31
CAPN12-209ENST00000597987 CCDC88BA6NC98 1476 aa23.17■■□□□ 1.3
CAPN12-209ENST00000597987 DNMBPQ6XZF7 1577 aa23.15■■□□□ 1.3
CAPN12-209ENST00000597987 FBLN2P98095 1184 aa23.09■■□□□ 1.29
CAPN12-209ENST00000597987 ABCC8Q09428 1581 aa23.07■■□□□ 1.28
CAPN12-209ENST00000597987 AEBP2Q6ZN18 517 aaPredicted RBP23.07■■□□□ 1.28
CAPN12-209ENST00000597987 CLASP1Q7Z460 1538 aa23.06■■□□□ 1.28
CAPN12-209ENST00000597987 POLA1P09884 1462 aaPredicted RBP23.05■■□□□ 1.28
CAPN12-209ENST00000597987 RAD54L2Q9Y4B4 1467 aa23■■□□□ 1.27
CAPN12-209ENST00000597987 SNAPC4Q5SXM2 1469 aa22.96■■□□□ 1.27
CAPN12-209ENST00000597987 TDRD9Q8NDG6 1382 aaKnown RBP22.95■■□□□ 1.26
CAPN12-209ENST00000597987 SYNJ1O43426 1573 aa22.87■■□□□ 1.25
CAPN12-209ENST00000597987 SOGA1O94964 1423 aa22.86■■□□□ 1.25
CAPN12-209ENST00000597987 FGD5Q6ZNL6 1462 aa22.8■■□□□ 1.24
CAPN12-209ENST00000597987 GAPVD1Q14C86 1478 aa22.79■■□□□ 1.24
CAPN12-209ENST00000597987 MAGI1Q96QZ7 1491 aaPredicted RBP22.79■■□□□ 1.24
CAPN12-209ENST00000597987 WDR97A6NE52 1622 aa22.79■■□□□ 1.24
CAPN12-209ENST00000597987 CHMP7Q8WUX9 453 aaPredicted RBP22.78■■□□□ 1.24
CAPN12-209ENST00000597987 SYNJ2O15056 1496 aa22.76■■□□□ 1.23
CAPN12-209ENST00000597987 GRIN2BQ13224 1484 aa22.73■■□□□ 1.23
CAPN12-209ENST00000597987 ERCC6L2Q5T890 1561 aa22.73■■□□□ 1.23
CAPN12-209ENST00000597987 CUX1P39880 1505 aa22.72■■□□□ 1.23
CAPN12-209ENST00000597987 PBRM1Q86U86 1689 aa22.7■■□□□ 1.22
CAPN12-209ENST00000597987 KIF13AQ9H1H9 1805 aa22.57■■□□□ 1.2
CAPN12-209ENST00000597987 ABCA5Q8WWZ7 1642 aa22.57■■□□□ 1.2
CAPN12-209ENST00000597987 CEP170Q5SW79 1584 aa22.53■■□□□ 1.2
CAPN12-209ENST00000597987 GRIN2AQ12879 1464 aa22.48■■□□□ 1.19
CAPN12-209ENST00000597987 ABCA10Q8WWZ4 1543 aa22.47■■□□□ 1.19
CAPN12-209ENST00000597987 SHROOM2Q13796 1616 aa22.46■■□□□ 1.19
CAPN12-209ENST00000597987 ADAMTS12P58397 1594 aa22.44■■□□□ 1.18
CAPN12-209ENST00000597987 NUP160Q12769 1436 aa22.44■■□□□ 1.18
CAPN12-209ENST00000597987 KDM4FA0A1W2PPD8 638 aa22.31■■□□□ 1.16
CAPN12-209ENST00000597987 ILDR1Q86SU0 546 aaPredicted RBP22.29■■□□□ 1.16
CAPN12-209ENST00000597987 ABCC10Q5T3U5 1492 aa22.27■■□□□ 1.16
CAPN12-209ENST00000597987 DIP2BQ9P265 1576 aa22.25■■□□□ 1.15
CAPN12-209ENST00000597987 PRG4Q92954 1404 aaPredicted RBP22.25■■□□□ 1.15
CAPN12-209ENST00000597987 FHAD1B1AJZ9 1412 aa22.24■■□□□ 1.15
CAPN12-209ENST00000597987 FAM69CQ0P6D2 419 aa22.23■■□□□ 1.15
CAPN12-209ENST00000597987 MAPKBP1O60336 1514 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 148.3 ms