RNA–Protein interactions for RNA: ENST00000597410.1

AC003002.3-201, humanhuman

APPRIS P1 TSL 3 BASIC

Gene AC003002.3, Length 521 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC003002.3-201ENST00000597410 NISCHQ9Y2I1 1504 aa21.34■■□□□ 1.01
AC003002.3-201ENST00000597410 ABCC9O60706 1549 aa19.8■□□□□ 0.76
AC003002.3-201ENST00000597410 CCDC180Q9P1Z9 1646 aa19.25■□□□□ 0.67
AC003002.3-201ENST00000597410 DNAJC5BQ9UF47 199 aa18.98■□□□□ 0.63
AC003002.3-201ENST00000597410 RB1CC1Q8TDY2 1594 aa18.6■□□□□ 0.57
AC003002.3-201ENST00000597410 PABPN1Q86U42 306 aaKnown RBP eCLIP18.39■□□□□ 0.53
AC003002.3-201ENST00000597410 NACADO15069 1562 aa18.37■□□□□ 0.53
AC003002.3-201ENST00000597410 DCAF8L2P0C7V8 631 aa18.25■□□□□ 0.51
AC003002.3-201ENST00000597410 BICRAQ9NZM4 1560 aa18.07■□□□□ 0.48
AC003002.3-201ENST00000597410 UNC13AQ9UPW8 1703 aa18.01■□□□□ 0.47
AC003002.3-201ENST00000597410 MYO15BQ96JP2 1530 aa17.99■□□□□ 0.47
AC003002.3-201ENST00000597410 CECR2Q9BXF3 1484 aa17.88■□□□□ 0.45
AC003002.3-201ENST00000597410 SHROOM4Q9ULL8 1493 aa17.82■□□□□ 0.44
AC003002.3-201ENST00000597410 CC2D2AQ9P2K1 1620 aa17.8■□□□□ 0.44
AC003002.3-201ENST00000597410 DNAJC5Q9H3Z4 198 aa17.74■□□□□ 0.43
AC003002.3-201ENST00000597410 EIF4G1Q04637 1599 aaKnown RBP17.68■□□□□ 0.42
AC003002.3-201ENST00000597410 ZCCHC6Q5VYS8 1495 aaKnown RBP17.61■□□□□ 0.41
AC003002.3-201ENST00000597410 DCAF1Q9Y4B6 1507 aa17.59■□□□□ 0.41
AC003002.3-201ENST00000597410 SCRIBQ14160 1630 aa17.57■□□□□ 0.4
AC003002.3-201ENST00000597410 CUX2O14529 1486 aa17.24■□□□□ 0.35
AC003002.3-201ENST00000597410 ERCC6Q03468 1493 aa17.12■□□□□ 0.33
AC003002.3-201ENST00000597410 NCAPD3P42695 1498 aa17.01■□□□□ 0.31
AC003002.3-201ENST00000597410 ATAD2BQ9ULI0 1458 aa16.89■□□□□ 0.29
AC003002.3-201ENST00000597410 NESP48681 1621 aa16.86■□□□□ 0.29
AC003002.3-201ENST00000597410 HMGXB3Q12766 1538 aa16.8■□□□□ 0.28
AC003002.3-201ENST00000597410 TRIM41Q8WV44 630 aa16.8■□□□□ 0.28
AC003002.3-201ENST00000597410 SMARCA2P51531 1590 aa16.79■□□□□ 0.28
AC003002.3-201ENST00000597410 THOC2Q8NI27 1593 aaKnown RBP16.74■□□□□ 0.27
AC003002.3-201ENST00000597410 SMARCA4P51532 1647 aa16.7■□□□□ 0.26
AC003002.3-201ENST00000597410 BAZ1BQ9UIG0 1483 aaKnown RBP16.69■□□□□ 0.26
AC003002.3-201ENST00000597410 LAMC3Q9Y6N6 1575 aa16.64■□□□□ 0.25
AC003002.3-201ENST00000597410 PDS5BQ9NTI5 1447 aa16.62■□□□□ 0.25
AC003002.3-201ENST00000597410 BAZ1AQ9NRL2 1556 aaPredicted RBP16.59■□□□□ 0.25
AC003002.3-201ENST00000597410 PEG3Q9GZU2 1588 aa16.55■□□□□ 0.24
AC003002.3-201ENST00000597410 KIF21AQ7Z4S6 1674 aa16.52■□□□□ 0.23
AC003002.3-201ENST00000597410 MRC2Q9UBG0 1479 aa16.49■□□□□ 0.23
AC003002.3-201ENST00000597410 CADPSQ9ULU8 1353 aa16.48■□□□□ 0.23
AC003002.3-201ENST00000597410 MROH2BQ7Z745 1585 aa16.45■□□□□ 0.22
AC003002.3-201ENST00000597410 WDR62O43379 1518 aa16.45■□□□□ 0.22
AC003002.3-201ENST00000597410 OSCARQ8IYS5 282 aa16.39■□□□□ 0.21
AC003002.3-201ENST00000597410 CEP164Q9UPV0 1460 aa16.34■□□□□ 0.21
AC003002.3-201ENST00000597410 FANCD2Q9BXW9 1451 aa16.29■□□□□ 0.2
AC003002.3-201ENST00000597410 CFTRP13569 1480 aa16.19■□□□□ 0.18
AC003002.3-201ENST00000597410 AEBP2Q6ZN18 517 aaPredicted RBP16.17■□□□□ 0.18
AC003002.3-201ENST00000597410 URB2Q14146 1524 aaKnown RBP16.17■□□□□ 0.18
AC003002.3-201ENST00000597410 WIZO95785 1651 aa16.16■□□□□ 0.18
AC003002.3-201ENST00000597410 RIMBP3CA6NJZ7 1639 aa16.16■□□□□ 0.18
AC003002.3-201ENST00000597410 RIMBP3BA6NNM3 1639 aa16.16■□□□□ 0.18
AC003002.3-201ENST00000597410 RIMBP3Q9UFD9 1639 aa16.16■□□□□ 0.18
AC003002.3-201ENST00000597410 ARHGEF11O15085 1522 aa16.11■□□□□ 0.17
AC003002.3-201ENST00000597410 ZNF608Q9ULD9 1512 aaPredicted RBP16.05■□□□□ 0.16
AC003002.3-201ENST00000597410 CYB5RLQ6IPT4 315 aa16.05■□□□□ 0.16
AC003002.3-201ENST00000597410 IFT140Q96RY7 1462 aa16.03■□□□□ 0.16
AC003002.3-201ENST00000597410 TRHP20396 242 aaPredicted RBP16.02■□□□□ 0.16
AC003002.3-201ENST00000597410 TOP2AP11388 1531 aaKnown RBP15.98■□□□□ 0.15
AC003002.3-201ENST00000597410 RSF1Q96T23 1441 aaPredicted RBP15.97■□□□□ 0.15
AC003002.3-201ENST00000597410 ARAP1Q96P48 1450 aa15.93■□□□□ 0.14
AC003002.3-201ENST00000597410 TOPBP1Q92547 1522 aa15.91■□□□□ 0.14
AC003002.3-201ENST00000597410 EIF4G3O43432 1585 aaKnown RBP15.89■□□□□ 0.13
AC003002.3-201ENST00000597410 FBLN2P98095 1184 aa15.86■□□□□ 0.13
AC003002.3-201ENST00000597410 CHIC1Q5VXU3 224 aa15.86■□□□□ 0.13
AC003002.3-201ENST00000597410 AQRO60306 1485 aaKnown RBP eCLIP15.85■□□□□ 0.13
AC003002.3-201ENST00000597410 ABCC8Q09428 1581 aa15.84■□□□□ 0.13
AC003002.3-201ENST00000597410 CCDC88BA6NC98 1476 aa15.82■□□□□ 0.12
AC003002.3-201ENST00000597410 DNMBPQ6XZF7 1577 aa15.79■□□□□ 0.12
AC003002.3-201ENST00000597410 PRDM2Q13029 1718 aa15.78■□□□□ 0.12
AC003002.3-201ENST00000597410 CHD1O14646 1710 aa15.77■□□□□ 0.12
AC003002.3-201ENST00000597410 TARBP1Q13395 1621 aaKnown RBP15.76■□□□□ 0.11
AC003002.3-201ENST00000597410 POLA1P09884 1462 aaPredicted RBP15.73■□□□□ 0.11
AC003002.3-201ENST00000597410 TDRD9Q8NDG6 1382 aaKnown RBP15.7■□□□□ 0.1
AC003002.3-201ENST00000597410 RAD54L2Q9Y4B4 1467 aa15.69■□□□□ 0.1
AC003002.3-201ENST00000597410 CLASP1Q7Z460 1538 aa15.68■□□□□ 0.1
AC003002.3-201ENST00000597410 SNAPC4Q5SXM2 1469 aa15.68■□□□□ 0.1
AC003002.3-201ENST00000597410 CHMP7Q8WUX9 453 aaPredicted RBP15.67■□□□□ 0.1
AC003002.3-201ENST00000597410 SOGA1O94964 1423 aa15.66■□□□□ 0.1
AC003002.3-201ENST00000597410 SYNJ1O43426 1573 aa15.62■□□□□ 0.09
AC003002.3-201ENST00000597410 MAGI1Q96QZ7 1491 aaPredicted RBP15.6■□□□□ 0.09
AC003002.3-201ENST00000597410 GAPVD1Q14C86 1478 aa15.59■□□□□ 0.09
AC003002.3-201ENST00000597410 GRIN2BQ13224 1484 aa15.58■□□□□ 0.08
AC003002.3-201ENST00000597410 SYNJ2O15056 1496 aa15.57■□□□□ 0.08
AC003002.3-201ENST00000597410 FGD5Q6ZNL6 1462 aa15.57■□□□□ 0.08
AC003002.3-201ENST00000597410 WDR97A6NE52 1622 aa15.57■□□□□ 0.08
AC003002.3-201ENST00000597410 CUX1P39880 1505 aa15.48■□□□□ 0.07
AC003002.3-201ENST00000597410 ERCC6L2Q5T890 1561 aa15.41■□□□□ 0.06
AC003002.3-201ENST00000597410 GRIN2AQ12879 1464 aa15.37■□□□□ 0.05
AC003002.3-201ENST00000597410 ABCA10Q8WWZ4 1543 aa15.36■□□□□ 0.05
AC003002.3-201ENST00000597410 PBRM1Q86U86 1689 aa15.35■□□□□ 0.05
AC003002.3-201ENST00000597410 NUP160Q12769 1436 aa15.34■□□□□ 0.05
AC003002.3-201ENST00000597410 CEP170Q5SW79 1584 aa15.34■□□□□ 0.05
AC003002.3-201ENST00000597410 ABCA5Q8WWZ7 1642 aa15.34■□□□□ 0.05
AC003002.3-201ENST00000597410 ADAMTS12P58397 1594 aa15.27■□□□□ 0.03
AC003002.3-201ENST00000597410 FHAD1B1AJZ9 1412 aa15.26■□□□□ 0.03
AC003002.3-201ENST00000597410 SHROOM2Q13796 1616 aa15.25■□□□□ 0.03
AC003002.3-201ENST00000597410 FAM69CQ0P6D2 419 aa15.25■□□□□ 0.03
AC003002.3-201ENST00000597410 WRNQ14191 1432 aaPredicted RBP eCLIP15.24■□□□□ 0.03
AC003002.3-201ENST00000597410 PRG4Q92954 1404 aaPredicted RBP15.24■□□□□ 0.03
AC003002.3-201ENST00000597410 KDM4FA0A1W2PPD8 638 aa15.23■□□□□ 0.03
AC003002.3-201ENST00000597410 ABCC10Q5T3U5 1492 aa15.22■□□□□ 0.03
AC003002.3-201ENST00000597410 ILDR1Q86SU0 546 aaPredicted RBP15.22■□□□□ 0.03
AC003002.3-201ENST00000597410 KIF13AQ9H1H9 1805 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms