RNA–Protein interactions for RNA: ENST00000596899.1

ZNF43-208, Transcript of zinc finger protein 43, humanhuman

TSL 3

Gene ZNF43, Length 447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF43-208ENST00000596899 NISCHQ9Y2I1 1504 aa33.84■■■■□ 3.01
ZNF43-208ENST00000596899 ABCC9O60706 1549 aa31.63■■■□□ 2.65
ZNF43-208ENST00000596899 CCDC180Q9P1Z9 1646 aa30.83■■■□□ 2.53
ZNF43-208ENST00000596899 DNAJC5BQ9UF47 199 aa30.37■■■□□ 2.45
ZNF43-208ENST00000596899 RB1CC1Q8TDY2 1594 aa29.73■■■□□ 2.35
ZNF43-208ENST00000596899 NACADO15069 1562 aa29.29■■■□□ 2.28
ZNF43-208ENST00000596899 PABPN1Q86U42 306 aaKnown RBP eCLIP29.25■■■□□ 2.27
ZNF43-208ENST00000596899 UNC13AQ9UPW8 1703 aa29.16■■■□□ 2.26
ZNF43-208ENST00000596899 DCAF8L2P0C7V8 631 aa28.91■■■□□ 2.22
ZNF43-208ENST00000596899 BICRAQ9NZM4 1560 aa28.9■■■□□ 2.22
ZNF43-208ENST00000596899 CECR2Q9BXF3 1484 aa28.57■■■□□ 2.16
ZNF43-208ENST00000596899 MYO15BQ96JP2 1530 aa28.56■■■□□ 2.16
ZNF43-208ENST00000596899 CC2D2AQ9P2K1 1620 aa28.55■■■□□ 2.16
ZNF43-208ENST00000596899 DNAJC5Q9H3Z4 198 aa28.52■■■□□ 2.16
ZNF43-208ENST00000596899 SHROOM4Q9ULL8 1493 aa28.39■■■□□ 2.13
ZNF43-208ENST00000596899 EIF4G1Q04637 1599 aaKnown RBP28.27■■■□□ 2.12
ZNF43-208ENST00000596899 SCRIBQ14160 1630 aa28.03■■■□□ 2.08
ZNF43-208ENST00000596899 DCAF1Q9Y4B6 1507 aa27.88■■■□□ 2.05
ZNF43-208ENST00000596899 ZCCHC6Q5VYS8 1495 aaKnown RBP27.87■■■□□ 2.05
ZNF43-208ENST00000596899 CUX2O14529 1486 aa27.6■■■□□ 2.01
ZNF43-208ENST00000596899 ERCC6Q03468 1493 aa27.38■■□□□ 1.97
ZNF43-208ENST00000596899 NCAPD3P42695 1498 aa27■■□□□ 1.91
ZNF43-208ENST00000596899 TRIM41Q8WV44 630 aa26.97■■□□□ 1.91
ZNF43-208ENST00000596899 NESP48681 1621 aa26.92■■□□□ 1.9
ZNF43-208ENST00000596899 THOC2Q8NI27 1593 aaKnown RBP26.87■■□□□ 1.89
ZNF43-208ENST00000596899 ATAD2BQ9ULI0 1458 aa26.82■■□□□ 1.88
ZNF43-208ENST00000596899 HMGXB3Q12766 1538 aa26.79■■□□□ 1.88
ZNF43-208ENST00000596899 SMARCA2P51531 1590 aa26.72■■□□□ 1.87
ZNF43-208ENST00000596899 SMARCA4P51532 1647 aa26.63■■□□□ 1.85
ZNF43-208ENST00000596899 KIF21AQ7Z4S6 1674 aa26.63■■□□□ 1.85
ZNF43-208ENST00000596899 LAMC3Q9Y6N6 1575 aa26.61■■□□□ 1.85
ZNF43-208ENST00000596899 BAZ1BQ9UIG0 1483 aaKnown RBP26.55■■□□□ 1.84
ZNF43-208ENST00000596899 PDS5BQ9NTI5 1447 aa26.42■■□□□ 1.82
ZNF43-208ENST00000596899 BAZ1AQ9NRL2 1556 aaPredicted RBP26.36■■□□□ 1.81
ZNF43-208ENST00000596899 PEG3Q9GZU2 1588 aa26.35■■□□□ 1.81
ZNF43-208ENST00000596899 MRC2Q9UBG0 1479 aa26.29■■□□□ 1.8
ZNF43-208ENST00000596899 WDR62O43379 1518 aa26.27■■□□□ 1.8
ZNF43-208ENST00000596899 CADPSQ9ULU8 1353 aa26.14■■□□□ 1.78
ZNF43-208ENST00000596899 OSCARQ8IYS5 282 aa26.13■■□□□ 1.77
ZNF43-208ENST00000596899 MROH2BQ7Z745 1585 aa26.08■■□□□ 1.77
ZNF43-208ENST00000596899 CEP164Q9UPV0 1460 aa26.02■■□□□ 1.76
ZNF43-208ENST00000596899 RIMBP3CA6NJZ7 1639 aa26.01■■□□□ 1.75
ZNF43-208ENST00000596899 RIMBP3BA6NNM3 1639 aa26.01■■□□□ 1.75
ZNF43-208ENST00000596899 RIMBP3Q9UFD9 1639 aa26.01■■□□□ 1.75
ZNF43-208ENST00000596899 FANCD2Q9BXW9 1451 aa25.89■■□□□ 1.73
ZNF43-208ENST00000596899 ARHGEF11O15085 1522 aa25.81■■□□□ 1.72
ZNF43-208ENST00000596899 WIZO95785 1651 aa25.77■■□□□ 1.72
ZNF43-208ENST00000596899 URB2Q14146 1524 aaKnown RBP25.74■■□□□ 1.71
ZNF43-208ENST00000596899 CFTRP13569 1480 aa25.68■■□□□ 1.7
ZNF43-208ENST00000596899 TRHP20396 242 aaPredicted RBP25.63■■□□□ 1.69
ZNF43-208ENST00000596899 CYB5RLQ6IPT4 315 aa25.61■■□□□ 1.69
ZNF43-208ENST00000596899 ZNF608Q9ULD9 1512 aaPredicted RBP25.57■■□□□ 1.68
ZNF43-208ENST00000596899 AEBP2Q6ZN18 517 aaPredicted RBP25.53■■□□□ 1.68
ZNF43-208ENST00000596899 PRDM2Q13029 1718 aa25.5■■□□□ 1.67
ZNF43-208ENST00000596899 IFT140Q96RY7 1462 aa25.5■■□□□ 1.67
ZNF43-208ENST00000596899 ARAP1Q96P48 1450 aa25.48■■□□□ 1.67
ZNF43-208ENST00000596899 CHD1O14646 1710 aa25.46■■□□□ 1.67
ZNF43-208ENST00000596899 EIF4G3O43432 1585 aaKnown RBP25.44■■□□□ 1.66
ZNF43-208ENST00000596899 TOP2AP11388 1531 aaKnown RBP25.35■■□□□ 1.65
ZNF43-208ENST00000596899 RSF1Q96T23 1441 aaPredicted RBP25.31■■□□□ 1.64
ZNF43-208ENST00000596899 TOPBP1Q92547 1522 aa25.31■■□□□ 1.64
ZNF43-208ENST00000596899 FBLN2P98095 1184 aa25.21■■□□□ 1.63
ZNF43-208ENST00000596899 AQRO60306 1485 aaKnown RBP eCLIP25.21■■□□□ 1.63
ZNF43-208ENST00000596899 TARBP1Q13395 1621 aaKnown RBP25.18■■□□□ 1.62
ZNF43-208ENST00000596899 ABCC8Q09428 1581 aa25.17■■□□□ 1.62
ZNF43-208ENST00000596899 DNMBPQ6XZF7 1577 aa25.16■■□□□ 1.62
ZNF43-208ENST00000596899 CLASP1Q7Z460 1538 aa25.07■■□□□ 1.6
ZNF43-208ENST00000596899 CCDC88BA6NC98 1476 aa25.03■■□□□ 1.6
ZNF43-208ENST00000596899 POLA1P09884 1462 aaPredicted RBP24.99■■□□□ 1.59
ZNF43-208ENST00000596899 SYNJ1O43426 1573 aa24.98■■□□□ 1.59
ZNF43-208ENST00000596899 SNAPC4Q5SXM2 1469 aa24.96■■□□□ 1.59
ZNF43-208ENST00000596899 RAD54L2Q9Y4B4 1467 aa24.91■■□□□ 1.58
ZNF43-208ENST00000596899 TDRD9Q8NDG6 1382 aaKnown RBP24.9■■□□□ 1.58
ZNF43-208ENST00000596899 CHMP7Q8WUX9 453 aaPredicted RBP24.86■■□□□ 1.57
ZNF43-208ENST00000596899 WDR97A6NE52 1622 aa24.85■■□□□ 1.57
ZNF43-208ENST00000596899 GAPVD1Q14C86 1478 aa24.84■■□□□ 1.57
ZNF43-208ENST00000596899 MAGI1Q96QZ7 1491 aaPredicted RBP24.83■■□□□ 1.57
ZNF43-208ENST00000596899 SOGA1O94964 1423 aa24.83■■□□□ 1.57
ZNF43-208ENST00000596899 SYNJ2O15056 1496 aa24.77■■□□□ 1.56
ZNF43-208ENST00000596899 GRIN2BQ13224 1484 aa24.73■■□□□ 1.55
ZNF43-208ENST00000596899 FGD5Q6ZNL6 1462 aa24.72■■□□□ 1.55
ZNF43-208ENST00000596899 PBRM1Q86U86 1689 aa24.69■■□□□ 1.54
ZNF43-208ENST00000596899 KIF13AQ9H1H9 1805 aa24.63■■□□□ 1.53
ZNF43-208ENST00000596899 ERCC6L2Q5T890 1561 aa24.63■■□□□ 1.53
ZNF43-208ENST00000596899 CUX1P39880 1505 aa24.56■■□□□ 1.52
ZNF43-208ENST00000596899 ILDR1Q86SU0 546 aaPredicted RBP24.53■■□□□ 1.52
ZNF43-208ENST00000596899 CEP170Q5SW79 1584 aa24.5■■□□□ 1.51
ZNF43-208ENST00000596899 ABCA5Q8WWZ7 1642 aa24.46■■□□□ 1.51
ZNF43-208ENST00000596899 GRIN2AQ12879 1464 aa24.43■■□□□ 1.5
ZNF43-208ENST00000596899 SHROOM2Q13796 1616 aa24.41■■□□□ 1.5
ZNF43-208ENST00000596899 ABCA10Q8WWZ4 1543 aa24.37■■□□□ 1.49
ZNF43-208ENST00000596899 NUP160Q12769 1436 aa24.36■■□□□ 1.49
ZNF43-208ENST00000596899 ADAMTS12P58397 1594 aa24.35■■□□□ 1.49
ZNF43-208ENST00000596899 KDM4FA0A1W2PPD8 638 aa24.35■■□□□ 1.49
ZNF43-208ENST00000596899 KDM6BO15054 1643 aa24.3■■□□□ 1.48
ZNF43-208ENST00000596899 ABCC10Q5T3U5 1492 aa24.28■■□□□ 1.48
ZNF43-208ENST00000596899 FAM69CQ0P6D2 419 aa24.28■■□□□ 1.48
ZNF43-208ENST00000596899 DIP2BQ9P265 1576 aa24.26■■□□□ 1.47
ZNF43-208ENST00000596899 MAPKBP1O60336 1514 aa24.2■■□□□ 1.47
ZNF43-208ENST00000596899 PRG4Q92954 1404 aaPredicted RBP24.2■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 143.7 ms