RNA–Protein interactions for RNA: ENST00000596149.5

CLPP-204, Transcript of caseinolytic mitochondrial matrix peptidase proteolytic subunit, humanhuman

TSL 2 BASIC

Gene CLPP, Length 745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPP-204ENST00000596149 NISCHQ9Y2I1 1504 aa28.57■■■□□ 2.16
CLPP-204ENST00000596149 ABCC9O60706 1549 aa26.46■■□□□ 1.83
CLPP-204ENST00000596149 CCDC180Q9P1Z9 1646 aa25.77■■□□□ 1.72
CLPP-204ENST00000596149 DNAJC5BQ9UF47 199 aa25.32■■□□□ 1.64
CLPP-204ENST00000596149 RB1CC1Q8TDY2 1594 aa24.86■■□□□ 1.57
CLPP-204ENST00000596149 PABPN1Q86U42 306 aaKnown RBP eCLIP24.56■■□□□ 1.52
CLPP-204ENST00000596149 NACADO15069 1562 aa24.51■■□□□ 1.51
CLPP-204ENST00000596149 DCAF8L2P0C7V8 631 aa24.42■■□□□ 1.5
CLPP-204ENST00000596149 UNC13AQ9UPW8 1703 aa24.27■■□□□ 1.48
CLPP-204ENST00000596149 BICRAQ9NZM4 1560 aa24.14■■□□□ 1.45
CLPP-204ENST00000596149 MYO15BQ96JP2 1530 aa24.03■■□□□ 1.44
CLPP-204ENST00000596149 CECR2Q9BXF3 1484 aa23.87■■□□□ 1.41
CLPP-204ENST00000596149 CC2D2AQ9P2K1 1620 aa23.82■■□□□ 1.4
CLPP-204ENST00000596149 SHROOM4Q9ULL8 1493 aa23.71■■□□□ 1.39
CLPP-204ENST00000596149 DNAJC5Q9H3Z4 198 aa23.67■■□□□ 1.38
CLPP-204ENST00000596149 EIF4G1Q04637 1599 aaKnown RBP23.62■■□□□ 1.37
CLPP-204ENST00000596149 ZCCHC6Q5VYS8 1495 aaKnown RBP23.56■■□□□ 1.36
CLPP-204ENST00000596149 DCAF1Q9Y4B6 1507 aa23.56■■□□□ 1.36
CLPP-204ENST00000596149 SCRIBQ14160 1630 aa23.54■■□□□ 1.36
CLPP-204ENST00000596149 CUX2O14529 1486 aa22.98■■□□□ 1.27
CLPP-204ENST00000596149 ERCC6Q03468 1493 aa22.9■■□□□ 1.26
CLPP-204ENST00000596149 NCAPD3P42695 1498 aa22.67■■□□□ 1.22
CLPP-204ENST00000596149 NESP48681 1621 aa22.54■■□□□ 1.2
CLPP-204ENST00000596149 ATAD2BQ9ULI0 1458 aa22.53■■□□□ 1.2
CLPP-204ENST00000596149 TRIM41Q8WV44 630 aa22.5■■□□□ 1.19
CLPP-204ENST00000596149 HMGXB3Q12766 1538 aa22.41■■□□□ 1.18
CLPP-204ENST00000596149 SMARCA2P51531 1590 aa22.41■■□□□ 1.18
CLPP-204ENST00000596149 THOC2Q8NI27 1593 aaKnown RBP22.39■■□□□ 1.18
CLPP-204ENST00000596149 SMARCA4P51532 1647 aa22.35■■□□□ 1.17
CLPP-204ENST00000596149 BAZ1BQ9UIG0 1483 aaKnown RBP22.29■■□□□ 1.16
CLPP-204ENST00000596149 LAMC3Q9Y6N6 1575 aa22.24■■□□□ 1.15
CLPP-204ENST00000596149 KIF21AQ7Z4S6 1674 aa22.2■■□□□ 1.15
CLPP-204ENST00000596149 BAZ1AQ9NRL2 1556 aaPredicted RBP22.16■■□□□ 1.14
CLPP-204ENST00000596149 PDS5BQ9NTI5 1447 aa22.15■■□□□ 1.14
CLPP-204ENST00000596149 PEG3Q9GZU2 1588 aa22.15■■□□□ 1.14
CLPP-204ENST00000596149 MROH2BQ7Z745 1585 aa22.03■■□□□ 1.12
CLPP-204ENST00000596149 MRC2Q9UBG0 1479 aa22.01■■□□□ 1.11
CLPP-204ENST00000596149 CADPSQ9ULU8 1353 aa21.96■■□□□ 1.11
CLPP-204ENST00000596149 WDR62O43379 1518 aa21.95■■□□□ 1.1
CLPP-204ENST00000596149 OSCARQ8IYS5 282 aa21.87■■□□□ 1.09
CLPP-204ENST00000596149 CEP164Q9UPV0 1460 aa21.81■■□□□ 1.08
CLPP-204ENST00000596149 FANCD2Q9BXW9 1451 aa21.72■■□□□ 1.07
CLPP-204ENST00000596149 WIZO95785 1651 aa21.7■■□□□ 1.06
CLPP-204ENST00000596149 RIMBP3CA6NJZ7 1639 aa21.66■■□□□ 1.06
CLPP-204ENST00000596149 RIMBP3BA6NNM3 1639 aa21.66■■□□□ 1.06
CLPP-204ENST00000596149 RIMBP3Q9UFD9 1639 aa21.66■■□□□ 1.06
CLPP-204ENST00000596149 CFTRP13569 1480 aa21.61■■□□□ 1.05
CLPP-204ENST00000596149 URB2Q14146 1524 aaKnown RBP21.58■■□□□ 1.04
CLPP-204ENST00000596149 ARHGEF11O15085 1522 aa21.52■■□□□ 1.04
CLPP-204ENST00000596149 TRHP20396 242 aaPredicted RBP21.44■■□□□ 1.02
CLPP-204ENST00000596149 CYB5RLQ6IPT4 315 aa21.44■■□□□ 1.02
CLPP-204ENST00000596149 ZNF608Q9ULD9 1512 aaPredicted RBP21.43■■□□□ 1.02
CLPP-204ENST00000596149 RSF1Q96T23 1441 aaPredicted RBP21.42■■□□□ 1.02
CLPP-204ENST00000596149 TOP2AP11388 1531 aaKnown RBP21.38■■□□□ 1.01
CLPP-204ENST00000596149 IFT140Q96RY7 1462 aa21.38■■□□□ 1.01
CLPP-204ENST00000596149 EIF4G3O43432 1585 aaKnown RBP21.27■■□□□ 1
CLPP-204ENST00000596149 AEBP2Q6ZN18 517 aaPredicted RBP21.27■■□□□ 1
CLPP-204ENST00000596149 PRDM2Q13029 1718 aa21.26■□□□□ 0.99
CLPP-204ENST00000596149 ARAP1Q96P48 1450 aa21.26■□□□□ 0.99
CLPP-204ENST00000596149 TOPBP1Q92547 1522 aa21.24■□□□□ 0.99
CLPP-204ENST00000596149 CHD1O14646 1710 aa21.21■□□□□ 0.99
CLPP-204ENST00000596149 FBLN2P98095 1184 aa21.21■□□□□ 0.99
CLPP-204ENST00000596149 CCDC88BA6NC98 1476 aa21.2■□□□□ 0.98
CLPP-204ENST00000596149 AQRO60306 1485 aaKnown RBP eCLIP21.16■□□□□ 0.986e-7■■■□□ 19.1
CLPP-204ENST00000596149 ABCC8Q09428 1581 aa21.12■□□□□ 0.97
CLPP-204ENST00000596149 DNMBPQ6XZF7 1577 aa21.1■□□□□ 0.97
CLPP-204ENST00000596149 TARBP1Q13395 1621 aaKnown RBP21.07■□□□□ 0.96
CLPP-204ENST00000596149 POLA1P09884 1462 aaPredicted RBP20.98■□□□□ 0.95
CLPP-204ENST00000596149 TDRD9Q8NDG6 1382 aaKnown RBP20.96■□□□□ 0.95
CLPP-204ENST00000596149 RAD54L2Q9Y4B4 1467 aa20.94■□□□□ 0.94
CLPP-204ENST00000596149 CLASP1Q7Z460 1538 aa20.94■□□□□ 0.94
CLPP-204ENST00000596149 SNAPC4Q5SXM2 1469 aa20.94■□□□□ 0.94
CLPP-204ENST00000596149 CHMP7Q8WUX9 453 aaPredicted RBP20.91■□□□□ 0.94
CLPP-204ENST00000596149 SYNJ1O43426 1573 aa20.89■□□□□ 0.94
CLPP-204ENST00000596149 SOGA1O94964 1423 aa20.89■□□□□ 0.94
CLPP-204ENST00000596149 MAGI1Q96QZ7 1491 aaPredicted RBP20.81■□□□□ 0.92
CLPP-204ENST00000596149 GAPVD1Q14C86 1478 aa20.8■□□□□ 0.92
CLPP-204ENST00000596149 FGD5Q6ZNL6 1462 aa20.78■□□□□ 0.92
CLPP-204ENST00000596149 WDR97A6NE52 1622 aa20.78■□□□□ 0.92
CLPP-204ENST00000596149 SYNJ2O15056 1496 aa20.76■□□□□ 0.91
CLPP-204ENST00000596149 GRIN2BQ13224 1484 aa20.76■□□□□ 0.91
CLPP-204ENST00000596149 CUX1P39880 1505 aa20.71■□□□□ 0.91
CLPP-204ENST00000596149 PBRM1Q86U86 1689 aa20.64■□□□□ 0.89
CLPP-204ENST00000596149 ERCC6L2Q5T890 1561 aa20.61■□□□□ 0.89
CLPP-204ENST00000596149 ABCA10Q8WWZ4 1543 aa20.52■□□□□ 0.87
CLPP-204ENST00000596149 GRIN2AQ12879 1464 aa20.5■□□□□ 0.87
CLPP-204ENST00000596149 ABCA5Q8WWZ7 1642 aa20.5■□□□□ 0.87
CLPP-204ENST00000596149 CEP170Q5SW79 1584 aa20.5■□□□□ 0.87
CLPP-204ENST00000596149 KIF13AQ9H1H9 1805 aa20.47■□□□□ 0.87
CLPP-204ENST00000596149 NUP160Q12769 1436 aa20.44■□□□□ 0.86
CLPP-204ENST00000596149 ADAMTS12P58397 1594 aa20.41■□□□□ 0.86
CLPP-204ENST00000596149 SHROOM2Q13796 1616 aa20.38■□□□□ 0.85
CLPP-204ENST00000596149 FAM69CQ0P6D2 419 aa20.38■□□□□ 0.85
CLPP-204ENST00000596149 ILDR1Q86SU0 546 aaPredicted RBP20.36■□□□□ 0.85
CLPP-204ENST00000596149 WRNQ14191 1432 aaPredicted RBP eCLIP20.35■□□□□ 0.85
CLPP-204ENST00000596149 FHAD1B1AJZ9 1412 aa20.34■□□□□ 0.85
CLPP-204ENST00000596149 PRG4Q92954 1404 aaPredicted RBP20.33■□□□□ 0.84
CLPP-204ENST00000596149 KDM4FA0A1W2PPD8 638 aa20.32■□□□□ 0.84
CLPP-204ENST00000596149 ABCC10Q5T3U5 1492 aa20.3■□□□□ 0.84
CLPP-204ENST00000596149 NPM1P06748 294 aaKnown RBP eCLIP20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms