RNA–Protein interactions for RNA: ENST00000595837.1

PCAT19-204, prostate cancer associated transcript 19, humanhuman

TSL 1 (best)

Gene PCAT19, Length 1,232 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT19-204ENST00000595837 CHIC1Q5VXU3 224 aa26.81■■□□□ 1.88
PCAT19-204ENST00000595837 AEBP2Q6ZN18 517 aaPredicted RBP26.15■■□□□ 1.78
PCAT19-204ENST00000595837 NISCHQ9Y2I1 1504 aa24.31■■□□□ 1.48
PCAT19-204ENST00000595837 PHF23Q9BUL5 403 aaPredicted RBP23.71■■□□□ 1.39
PCAT19-204ENST00000595837 PLPPR3Q6T4P5 718 aa22.36■■□□□ 1.17
PCAT19-204ENST00000595837 SENP3Q9H4L4 574 aaPredicted RBP22.02■■□□□ 1.12
PCAT19-204ENST00000595837 CCDC180Q9P1Z9 1646 aa21.84■■□□□ 1.09
PCAT19-204ENST00000595837 ABCC9O60706 1549 aa21.34■■□□□ 1.01
PCAT19-204ENST00000595837 EHMT2Q96KQ7 1210 aa21.04■□□□□ 0.96
PCAT19-204ENST00000595837 ADRA2BP18089 450 aa20.89■□□□□ 0.93
PCAT19-204ENST00000595837 KCNA4P22459 653 aa20.86■□□□□ 0.93
PCAT19-204ENST00000595837 DNAJC5BQ9UF47 199 aa20.72■□□□□ 0.91
PCAT19-204ENST00000595837 RB1CC1Q8TDY2 1594 aa20.59■□□□□ 0.89
PCAT19-204ENST00000595837 NACADO15069 1562 aa20.53■□□□□ 0.88
PCAT19-204ENST00000595837 PPP6R1Q9UPN7 881 aa20.49■□□□□ 0.87
PCAT19-204ENST00000595837 MYO15BQ96JP2 1530 aa20.41■□□□□ 0.86
PCAT19-204ENST00000595837 FOXD1Q16676 465 aa20.26■□□□□ 0.83
PCAT19-204ENST00000595837 ZCCHC6Q5VYS8 1495 aaKnown RBP20.24■□□□□ 0.83
PCAT19-204ENST00000595837 DCAF1Q9Y4B6 1507 aa20.22■□□□□ 0.83
PCAT19-204ENST00000595837 DCAF8L2P0C7V8 631 aa20.15■□□□□ 0.82
PCAT19-204ENST00000595837 CSRNP3Q8WYN3 585 aa20.15■□□□□ 0.82
PCAT19-204ENST00000595837 SLC4A1APQ9BWU0 796 aaKnown RBP20.12■□□□□ 0.81
PCAT19-204ENST00000595837 UNC13AQ9UPW8 1703 aa20.08■□□□□ 0.81
PCAT19-204ENST00000595837 BICRAQ9NZM4 1560 aa19.91■□□□□ 0.78
PCAT19-204ENST00000595837 SHROOM4Q9ULL8 1493 aa19.88■□□□□ 0.77
PCAT19-204ENST00000595837 PPP4R3CPQ6ZMV5 832 aa19.86■□□□□ 0.77
PCAT19-204ENST00000595837 PABPN1Q86U42 306 aaKnown RBP eCLIP19.8■□□□□ 0.76
PCAT19-204ENST00000595837 SCRIBQ14160 1630 aa19.75■□□□□ 0.75
PCAT19-204ENST00000595837 NCBP3Q53F19 620 aaKnown RBP19.74■□□□□ 0.75
PCAT19-204ENST00000595837 DNAJC5Q9H3Z4 198 aa19.61■□□□□ 0.73
PCAT19-204ENST00000595837 PIAS4Q8N2W9 510 aaPredicted RBP19.45■□□□□ 0.7
PCAT19-204ENST00000595837 EIF4G1Q04637 1599 aaKnown RBP19.42■□□□□ 0.7
PCAT19-204ENST00000595837 NPM3O75607 178 aaKnown RBP19.42■□□□□ 0.7
PCAT19-204ENST00000595837 CC2D2AQ9P2K1 1620 aa19.36■□□□□ 0.69
PCAT19-204ENST00000595837 CECR2Q9BXF3 1484 aa19.26■□□□□ 0.67
PCAT19-204ENST00000595837 ZBTB22O15209 634 aa19.19■□□□□ 0.66
PCAT19-204ENST00000595837 SLC24A1O60721 1099 aa19.1■□□□□ 0.65
PCAT19-204ENST00000595837 CNKSR2Q8WXI2 1034 aa19.02■□□□□ 0.64
PCAT19-204ENST00000595837 SMARCA4P51532 1647 aa18.93■□□□□ 0.62
PCAT19-204ENST00000595837 BAZ1AQ9NRL2 1556 aaPredicted RBP18.91■□□□□ 0.62
PCAT19-204ENST00000595837 NCAPD3P42695 1498 aa18.9■□□□□ 0.62
PCAT19-204ENST00000595837 SMARCA2P51531 1590 aa18.89■□□□□ 0.62
PCAT19-204ENST00000595837 HMGXB3Q12766 1538 aa18.86■□□□□ 0.61
PCAT19-204ENST00000595837 ATAD2BQ9ULI0 1458 aa18.84■□□□□ 0.61
PCAT19-204ENST00000595837 SCAF1Q9H7N4 1312 aaKnown RBP18.84■□□□□ 0.61
PCAT19-204ENST00000595837 FOXD4L1Q9NU39 408 aa18.83■□□□□ 0.6
PCAT19-204ENST00000595837 PEG3Q9GZU2 1588 aa18.82■□□□□ 0.6
PCAT19-204ENST00000595837 AMER1Q5JTC6 1135 aaPredicted RBP18.82■□□□□ 0.6
PCAT19-204ENST00000595837 RTN4Q9NQC3 1192 aaKnown RBP18.8■□□□□ 0.6
PCAT19-204ENST00000595837 BAZ1BQ9UIG0 1483 aaKnown RBP18.71■□□□□ 0.59
PCAT19-204ENST00000595837 MROH2BQ7Z745 1585 aa18.67■□□□□ 0.58
PCAT19-204ENST00000595837 CUX2O14529 1486 aa18.63■□□□□ 0.57
PCAT19-204ENST00000595837 TRIM41Q8WV44 630 aa18.53■□□□□ 0.56
PCAT19-204ENST00000595837 LAMC3Q9Y6N6 1575 aa18.48■□□□□ 0.55
PCAT19-204ENST00000595837 ERCC6Q03468 1493 aa18.47■□□□□ 0.55
PCAT19-204ENST00000595837 WIZO95785 1651 aa18.45■□□□□ 0.54
PCAT19-204ENST00000595837 MSH5O43196 834 aa18.43■□□□□ 0.54
PCAT19-204ENST00000595837 RSF1Q96T23 1441 aaPredicted RBP18.4■□□□□ 0.54
PCAT19-204ENST00000595837 NESP48681 1621 aa18.39■□□□□ 0.53
PCAT19-204ENST00000595837 TOP2AP11388 1531 aaKnown RBP18.34■□□□□ 0.53
PCAT19-204ENST00000595837 RNF216Q9NWF9 866 aaPredicted RBP18.32■□□□□ 0.52
PCAT19-204ENST00000595837 PDS5BQ9NTI5 1447 aa18.32■□□□□ 0.52
PCAT19-204ENST00000595837 THOC2Q8NI27 1593 aaKnown RBP18.3■□□□□ 0.52
PCAT19-204ENST00000595837 CADPSQ9ULU8 1353 aa18.3■□□□□ 0.52
PCAT19-204ENST00000595837 MAPK8IP2Q13387 824 aaPredicted RBP18.28■□□□□ 0.52
PCAT19-204ENST00000595837 KIF21AQ7Z4S6 1674 aa18.27■□□□□ 0.52
PCAT19-204ENST00000595837 POTEDQ86YR6 584 aa18.24■□□□□ 0.51
PCAT19-204ENST00000595837 CFTRP13569 1480 aa18.18■□□□□ 0.5
PCAT19-204ENST00000595837 FKBP8Q14318 412 aa18.17■□□□□ 0.5
PCAT19-204ENST00000595837 MRC2Q9UBG0 1479 aa18.14■□□□□ 0.5
PCAT19-204ENST00000595837 PRDM2Q13029 1718 aa18.13■□□□□ 0.49
PCAT19-204ENST00000595837 CEP164Q9UPV0 1460 aa18.13■□□□□ 0.49
PCAT19-204ENST00000595837 WDR62O43379 1518 aa18.11■□□□□ 0.49
PCAT19-204ENST00000595837 FANCD2Q9BXW9 1451 aa18.09■□□□□ 0.49
PCAT19-204ENST00000595837 ATXN8OSP0DMR3 200 aa18.05■□□□□ 0.48
PCAT19-204ENST00000595837 CCDC88BA6NC98 1476 aa18.03■□□□□ 0.48
PCAT19-204ENST00000595837 SLC4A2P04920 1241 aa18.01■□□□□ 0.47
PCAT19-204ENST00000595837 MYCNP04198 464 aaPredicted RBP17.93■□□□□ 0.46
PCAT19-204ENST00000595837 URB2Q14146 1524 aaKnown RBP17.91■□□□□ 0.46
PCAT19-204ENST00000595837 HOXD11P31277 338 aaPredicted RBP17.89■□□□□ 0.45
PCAT19-204ENST00000595837 ABCC8Q09428 1581 aa17.86■□□□□ 0.45
PCAT19-204ENST00000595837 DNMBPQ6XZF7 1577 aa17.79■□□□□ 0.44
PCAT19-204ENST00000595837 TOPBP1Q92547 1522 aa17.79■□□□□ 0.44
PCAT19-204ENST00000595837 DMRT2Q9Y5R5 561 aa17.77■□□□□ 0.44
PCAT19-204ENST00000595837 IFT140Q96RY7 1462 aa17.76■□□□□ 0.43
PCAT19-204ENST00000595837 OSCARQ8IYS5 282 aa17.69■□□□□ 0.42
PCAT19-204ENST00000595837 TARBP1Q13395 1621 aaKnown RBP17.63■□□□□ 0.41
PCAT19-204ENST00000595837 POLA1P09884 1462 aaPredicted RBP17.63■□□□□ 0.41
PCAT19-204ENST00000595837 EIF4G3O43432 1585 aaKnown RBP17.62■□□□□ 0.41
PCAT19-204ENST00000595837 WDR97A6NE52 1622 aa17.61■□□□□ 0.41
PCAT19-204ENST00000595837 SUPT5HO00267 1087 aaKnown RBP17.61■□□□□ 0.41
PCAT19-204ENST00000595837 ZNF608Q9ULD9 1512 aaPredicted RBP17.59■□□□□ 0.41
PCAT19-204ENST00000595837 CUX1P39880 1505 aa17.56■□□□□ 0.4
PCAT19-204ENST00000595837 FGD5Q6ZNL6 1462 aa17.54■□□□□ 0.4
PCAT19-204ENST00000595837 RIMBP3CA6NJZ7 1639 aa17.54■□□□□ 0.4
PCAT19-204ENST00000595837 RIMBP3BA6NNM3 1639 aa17.54■□□□□ 0.4
PCAT19-204ENST00000595837 RIMBP3Q9UFD9 1639 aa17.54■□□□□ 0.4
PCAT19-204ENST00000595837 TRHP20396 242 aaPredicted RBP17.51■□□□□ 0.39
PCAT19-204ENST00000595837 SOGA1O94964 1423 aa17.49■□□□□ 0.39
PCAT19-204ENST00000595837 RAD54L2Q9Y4B4 1467 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms