RNA–Protein interactions for RNA: ENST00000595470.1

ECH1-204, Transcript of enoyl-CoA hydratase 1, humanhuman

TSL 2

Gene ECH1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECH1-204ENST00000595470 NISCHQ9Y2I1 1504 aa32.56■■■□□ 2.8
ECH1-204ENST00000595470 ABCC9O60706 1549 aa30.43■■■□□ 2.46
ECH1-204ENST00000595470 CCDC180Q9P1Z9 1646 aa29.56■■■□□ 2.32
ECH1-204ENST00000595470 DNAJC5BQ9UF47 199 aa29.5■■■□□ 2.31
ECH1-204ENST00000595470 RB1CC1Q8TDY2 1594 aa28.6■■■□□ 2.17
ECH1-204ENST00000595470 NACADO15069 1562 aa28.24■■■□□ 2.11
ECH1-204ENST00000595470 PABPN1Q86U42 306 aaKnown RBP eCLIP28.22■■■□□ 2.11
ECH1-204ENST00000595470 UNC13AQ9UPW8 1703 aa27.84■■■□□ 2.05
ECH1-204ENST00000595470 BICRAQ9NZM4 1560 aa27.83■■■□□ 2.05
ECH1-204ENST00000595470 DNAJC5Q9H3Z4 198 aa27.83■■■□□ 2.05
ECH1-204ENST00000595470 DCAF8L2P0C7V8 631 aa27.77■■■□□ 2.04
ECH1-204ENST00000595470 MYO15BQ96JP2 1530 aa27.65■■■□□ 2.02
ECH1-204ENST00000595470 CECR2Q9BXF3 1484 aa27.57■■■□□ 2
ECH1-204ENST00000595470 SHROOM4Q9ULL8 1493 aa27.46■■□□□ 1.99
ECH1-204ENST00000595470 CC2D2AQ9P2K1 1620 aa27.45■■□□□ 1.99
ECH1-204ENST00000595470 EIF4G1Q04637 1599 aaKnown RBP27.2■■□□□ 1.94
ECH1-204ENST00000595470 DCAF1Q9Y4B6 1507 aa26.92■■□□□ 1.9
ECH1-204ENST00000595470 SCRIBQ14160 1630 aa26.77■■□□□ 1.88
ECH1-204ENST00000595470 ZCCHC6Q5VYS8 1495 aaKnown RBP26.77■■□□□ 1.88
ECH1-204ENST00000595470 CUX2O14529 1486 aa26.72■■□□□ 1.87
ECH1-204ENST00000595470 ERCC6Q03468 1493 aa26.34■■□□□ 1.81
ECH1-204ENST00000595470 NCAPD3P42695 1498 aa26.15■■□□□ 1.78
ECH1-204ENST00000595470 TRIM41Q8WV44 630 aa26.02■■□□□ 1.76
ECH1-204ENST00000595470 NESP48681 1621 aa25.88■■□□□ 1.73
ECH1-204ENST00000595470 ATAD2BQ9ULI0 1458 aa25.87■■□□□ 1.73
ECH1-204ENST00000595470 THOC2Q8NI27 1593 aaKnown RBP25.81■■□□□ 1.72
ECH1-204ENST00000595470 HMGXB3Q12766 1538 aa25.79■■□□□ 1.72
ECH1-204ENST00000595470 SMARCA2P51531 1590 aa25.72■■□□□ 1.71
ECH1-204ENST00000595470 LAMC3Q9Y6N6 1575 aa25.61■■□□□ 1.69
ECH1-204ENST00000595470 PDS5BQ9NTI5 1447 aa25.54■■□□□ 1.68
ECH1-204ENST00000595470 SMARCA4P51532 1647 aa25.53■■□□□ 1.68
ECH1-204ENST00000595470 BAZ1BQ9UIG0 1483 aaKnown RBP25.51■■□□□ 1.67
ECH1-204ENST00000595470 KIF21AQ7Z4S6 1674 aa25.43■■□□□ 1.66
ECH1-204ENST00000595470 PEG3Q9GZU2 1588 aa25.39■■□□□ 1.66
ECH1-204ENST00000595470 OSCARQ8IYS5 282 aa25.37■■□□□ 1.65
ECH1-204ENST00000595470 MRC2Q9UBG0 1479 aa25.32■■□□□ 1.64
ECH1-204ENST00000595470 BAZ1AQ9NRL2 1556 aaPredicted RBP25.31■■□□□ 1.64
ECH1-204ENST00000595470 WDR62O43379 1518 aa25.3■■□□□ 1.64
ECH1-204ENST00000595470 CADPSQ9ULU8 1353 aa25.28■■□□□ 1.64
ECH1-204ENST00000595470 MROH2BQ7Z745 1585 aa25.03■■□□□ 1.6
ECH1-204ENST00000595470 CEP164Q9UPV0 1460 aa25.01■■□□□ 1.59
ECH1-204ENST00000595470 RIMBP3CA6NJZ7 1639 aa25■■□□□ 1.59
ECH1-204ENST00000595470 RIMBP3BA6NNM3 1639 aa25■■□□□ 1.59
ECH1-204ENST00000595470 RIMBP3Q9UFD9 1639 aa25■■□□□ 1.59
ECH1-204ENST00000595470 FANCD2Q9BXW9 1451 aa24.92■■□□□ 1.58
ECH1-204ENST00000595470 ARHGEF11O15085 1522 aa24.88■■□□□ 1.57
ECH1-204ENST00000595470 CFTRP13569 1480 aa24.79■■□□□ 1.56
ECH1-204ENST00000595470 URB2Q14146 1524 aaKnown RBP24.77■■□□□ 1.56
ECH1-204ENST00000595470 CYB5RLQ6IPT4 315 aa24.77■■□□□ 1.56
ECH1-204ENST00000595470 TRHP20396 242 aaPredicted RBP24.73■■□□□ 1.55
ECH1-204ENST00000595470 AEBP2Q6ZN18 517 aaPredicted RBP24.69■■□□□ 1.54
ECH1-204ENST00000595470 WIZO95785 1651 aa24.61■■□□□ 1.53
ECH1-204ENST00000595470 ZNF608Q9ULD9 1512 aaPredicted RBP24.61■■□□□ 1.53
ECH1-204ENST00000595470 IFT140Q96RY7 1462 aa24.6■■□□□ 1.53
ECH1-204ENST00000595470 ARAP1Q96P48 1450 aa24.58■■□□□ 1.52
ECH1-204ENST00000595470 RSF1Q96T23 1441 aaPredicted RBP24.5■■□□□ 1.51
ECH1-204ENST00000595470 EIF4G3O43432 1585 aaKnown RBP24.36■■□□□ 1.49
ECH1-204ENST00000595470 TOPBP1Q92547 1522 aa24.35■■□□□ 1.49
ECH1-204ENST00000595470 TOP2AP11388 1531 aaKnown RBP24.3■■□□□ 1.48
ECH1-204ENST00000595470 CHD1O14646 1710 aa24.3■■□□□ 1.48
ECH1-204ENST00000595470 ABCC8Q09428 1581 aa24.29■■□□□ 1.48
ECH1-204ENST00000595470 AQRO60306 1485 aaKnown RBP eCLIP24.28■■□□□ 1.487e-9■■■■■ 30.5
ECH1-204ENST00000595470 PRDM2Q13029 1718 aa24.27■■□□□ 1.48
ECH1-204ENST00000595470 FBLN2P98095 1184 aa24.24■■□□□ 1.47
ECH1-204ENST00000595470 TARBP1Q13395 1621 aaKnown RBP24.2■■□□□ 1.46
ECH1-204ENST00000595470 DNMBPQ6XZF7 1577 aa24.15■■□□□ 1.46
ECH1-204ENST00000595470 CLASP1Q7Z460 1538 aa24.14■■□□□ 1.45
ECH1-204ENST00000595470 CCDC88BA6NC98 1476 aa24.07■■□□□ 1.44
ECH1-204ENST00000595470 POLA1P09884 1462 aaPredicted RBP24.04■■□□□ 1.44
ECH1-204ENST00000595470 SYNJ1O43426 1573 aa23.99■■□□□ 1.43
ECH1-204ENST00000595470 CHMP7Q8WUX9 453 aaPredicted RBP23.99■■□□□ 1.43
ECH1-204ENST00000595470 TDRD9Q8NDG6 1382 aaKnown RBP23.99■■□□□ 1.43
ECH1-204ENST00000595470 SNAPC4Q5SXM2 1469 aa23.96■■□□□ 1.43
ECH1-204ENST00000595470 GAPVD1Q14C86 1478 aa23.95■■□□□ 1.42
ECH1-204ENST00000595470 MAGI1Q96QZ7 1491 aaPredicted RBP23.94■■□□□ 1.42
ECH1-204ENST00000595470 RAD54L2Q9Y4B4 1467 aa23.94■■□□□ 1.42
ECH1-204ENST00000595470 SOGA1O94964 1423 aa23.93■■□□□ 1.42
ECH1-204ENST00000595470 WDR97A6NE52 1622 aa23.92■■□□□ 1.42
ECH1-204ENST00000595470 SYNJ2O15056 1496 aa23.86■■□□□ 1.41
ECH1-204ENST00000595470 GRIN2BQ13224 1484 aa23.83■■□□□ 1.41
ECH1-204ENST00000595470 ILDR1Q86SU0 546 aaPredicted RBP23.82■■□□□ 1.4
ECH1-204ENST00000595470 FGD5Q6ZNL6 1462 aa23.73■■□□□ 1.39
ECH1-204ENST00000595470 ERCC6L2Q5T890 1561 aa23.63■■□□□ 1.37
ECH1-204ENST00000595470 KDM4FA0A1W2PPD8 638 aa23.62■■□□□ 1.37
ECH1-204ENST00000595470 KIF13AQ9H1H9 1805 aa23.59■■□□□ 1.37
ECH1-204ENST00000595470 CUX1P39880 1505 aa23.57■■□□□ 1.36
ECH1-204ENST00000595470 CEP170Q5SW79 1584 aa23.54■■□□□ 1.36
ECH1-204ENST00000595470 NUP160Q12769 1436 aa23.52■■□□□ 1.36
ECH1-204ENST00000595470 PBRM1Q86U86 1689 aa23.51■■□□□ 1.35
ECH1-204ENST00000595470 GRIN2AQ12879 1464 aa23.5■■□□□ 1.35
ECH1-204ENST00000595470 ABCC10Q5T3U5 1492 aa23.47■■□□□ 1.35
ECH1-204ENST00000595470 ABCA10Q8WWZ4 1543 aa23.47■■□□□ 1.35
ECH1-204ENST00000595470 FAM69CQ0P6D2 419 aa23.46■■□□□ 1.35
ECH1-204ENST00000595470 SHROOM2Q13796 1616 aa23.46■■□□□ 1.35
ECH1-204ENST00000595470 ABCA5Q8WWZ7 1642 aa23.44■■□□□ 1.34
ECH1-204ENST00000595470 MAPKBP1O60336 1514 aa23.35■■□□□ 1.33
ECH1-204ENST00000595470 ADAMTS12P58397 1594 aa23.32■■□□□ 1.32
ECH1-204ENST00000595470 PRG4Q92954 1404 aaPredicted RBP23.32■■□□□ 1.32
ECH1-204ENST00000595470 KDM6BO15054 1643 aa23.31■■□□□ 1.32
ECH1-204ENST00000595470 FHAD1B1AJZ9 1412 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms