RNA–Protein interactions for RNA: ENST00000594657.1

FARP1-211, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-211ENST00000594657 AEBP2Q6ZN18 517 aaPredicted RBP31.45■■■□□ 2.63
FARP1-211ENST00000594657 NISCHQ9Y2I1 1504 aa31.25■■■□□ 2.59
FARP1-211ENST00000594657 CHIC1Q5VXU3 224 aa30.37■■■□□ 2.45
FARP1-211ENST00000594657 CCDC180Q9P1Z9 1646 aa27.84■■■□□ 2.05
FARP1-211ENST00000594657 ABCC9O60706 1549 aa27.21■■□□□ 1.95
FARP1-211ENST00000594657 SENP3Q9H4L4 574 aaPredicted RBP26.93■■□□□ 1.9
FARP1-211ENST00000594657 PHF23Q9BUL5 403 aaPredicted RBP26.59■■□□□ 1.85
FARP1-211ENST00000594657 RB1CC1Q8TDY2 1594 aa26.13■■□□□ 1.77
FARP1-211ENST00000594657 NACADO15069 1562 aa26.08■■□□□ 1.77
FARP1-211ENST00000594657 ZCCHC6Q5VYS8 1495 aaKnown RBP26.07■■□□□ 1.76
FARP1-211ENST00000594657 DCAF8L2P0C7V8 631 aa26.03■■□□□ 1.76
FARP1-211ENST00000594657 MYO15BQ96JP2 1530 aa25.88■■□□□ 1.73
FARP1-211ENST00000594657 DCAF1Q9Y4B6 1507 aa25.81■■□□□ 1.72
FARP1-211ENST00000594657 UNC13AQ9UPW8 1703 aa25.77■■□□□ 1.72
FARP1-211ENST00000594657 SCRIBQ14160 1630 aa25.46■■□□□ 1.67
FARP1-211ENST00000594657 BICRAQ9NZM4 1560 aa25.44■■□□□ 1.66
FARP1-211ENST00000594657 PABPN1Q86U42 306 aaKnown RBP eCLIP25.38■■□□□ 1.65
FARP1-211ENST00000594657 SHROOM4Q9ULL8 1493 aa25■■□□□ 1.59
FARP1-211ENST00000594657 FOXD1Q16676 465 aa24.94■■□□□ 1.58
FARP1-211ENST00000594657 DNAJC5BQ9UF47 199 aa24.94■■□□□ 1.58
FARP1-211ENST00000594657 EIF4G1Q04637 1599 aaKnown RBP24.72■■□□□ 1.55
FARP1-211ENST00000594657 CC2D2AQ9P2K1 1620 aa24.64■■□□□ 1.53
FARP1-211ENST00000594657 PLPPR3Q6T4P5 718 aa24.54■■□□□ 1.52
FARP1-211ENST00000594657 CECR2Q9BXF3 1484 aa24.4■■□□□ 1.5
FARP1-211ENST00000594657 SMARCA4P51532 1647 aa24.32■■□□□ 1.48
FARP1-211ENST00000594657 BAZ1AQ9NRL2 1556 aaPredicted RBP24.21■■□□□ 1.47
FARP1-211ENST00000594657 MROH2BQ7Z745 1585 aa24.15■■□□□ 1.46
FARP1-211ENST00000594657 ATAD2BQ9ULI0 1458 aa24.1■■□□□ 1.45
FARP1-211ENST00000594657 SMARCA2P51531 1590 aa24.05■■□□□ 1.44
FARP1-211ENST00000594657 NCAPD3P42695 1498 aa24.04■■□□□ 1.44
FARP1-211ENST00000594657 PEG3Q9GZU2 1588 aa24.02■■□□□ 1.44
FARP1-211ENST00000594657 HMGXB3Q12766 1538 aa23.98■■□□□ 1.43
FARP1-211ENST00000594657 WIZO95785 1651 aa23.95■■□□□ 1.42
FARP1-211ENST00000594657 BAZ1BQ9UIG0 1483 aaKnown RBP23.9■■□□□ 1.42
FARP1-211ENST00000594657 RSF1Q96T23 1441 aaPredicted RBP23.81■■□□□ 1.4
FARP1-211ENST00000594657 PPP6R1Q9UPN7 881 aa23.62■■□□□ 1.37
FARP1-211ENST00000594657 TOP2AP11388 1531 aaKnown RBP23.61■■□□□ 1.37
FARP1-211ENST00000594657 ADRA2BP18089 450 aa23.61■■□□□ 1.37
FARP1-211ENST00000594657 NESP48681 1621 aa23.59■■□□□ 1.37
FARP1-211ENST00000594657 PIAS4Q8N2W9 510 aaPredicted RBP23.49■■□□□ 1.35
FARP1-211ENST00000594657 LAMC3Q9Y6N6 1575 aa23.46■■□□□ 1.35
FARP1-211ENST00000594657 KIF21AQ7Z4S6 1674 aa23.38■■□□□ 1.33
FARP1-211ENST00000594657 ERCC6Q03468 1493 aa23.38■■□□□ 1.33
FARP1-211ENST00000594657 CADPSQ9ULU8 1353 aa23.33■■□□□ 1.33
FARP1-211ENST00000594657 CCDC88BA6NC98 1476 aa23.3■■□□□ 1.32
FARP1-211ENST00000594657 MSH5O43196 834 aa23.3■■□□□ 1.32
FARP1-211ENST00000594657 THOC2Q8NI27 1593 aaKnown RBP23.26■■□□□ 1.31
FARP1-211ENST00000594657 PRDM2Q13029 1718 aa23.23■■□□□ 1.31
FARP1-211ENST00000594657 CFTRP13569 1480 aa23.23■■□□□ 1.31
FARP1-211ENST00000594657 PDS5BQ9NTI5 1447 aa23.2■■□□□ 1.3
FARP1-211ENST00000594657 SUPT5HO00267 1087 aaKnown RBP23.2■■□□□ 1.3
FARP1-211ENST00000594657 FANCD2Q9BXW9 1451 aa23.12■■□□□ 1.29
FARP1-211ENST00000594657 CUX2O14529 1486 aa23.11■■□□□ 1.29
FARP1-211ENST00000594657 CEP164Q9UPV0 1460 aa23.09■■□□□ 1.29
FARP1-211ENST00000594657 MRC2Q9UBG0 1479 aa23.05■■□□□ 1.28
FARP1-211ENST00000594657 WDR62O43379 1518 aa23.01■■□□□ 1.27
FARP1-211ENST00000594657 URB2Q14146 1524 aaKnown RBP22.94■■□□□ 1.26
FARP1-211ENST00000594657 TOPBP1Q92547 1522 aa22.77■■□□□ 1.24
FARP1-211ENST00000594657 DNMBPQ6XZF7 1577 aa22.76■■□□□ 1.23
FARP1-211ENST00000594657 ABCC8Q09428 1581 aa22.66■■□□□ 1.22
FARP1-211ENST00000594657 CUX1P39880 1505 aa22.65■■□□□ 1.22
FARP1-211ENST00000594657 POLA1P09884 1462 aaPredicted RBP22.59■■□□□ 1.21
FARP1-211ENST00000594657 TARBP1Q13395 1621 aaKnown RBP22.57■■□□□ 1.2
FARP1-211ENST00000594657 IFT140Q96RY7 1462 aa22.57■■□□□ 1.2
FARP1-211ENST00000594657 ZNF608Q9ULD9 1512 aaPredicted RBP22.56■■□□□ 1.2
FARP1-211ENST00000594657 FGD5Q6ZNL6 1462 aa22.54■■□□□ 1.2
FARP1-211ENST00000594657 EIF4G3O43432 1585 aaKnown RBP22.51■■□□□ 1.19
FARP1-211ENST00000594657 RAD54L2Q9Y4B4 1467 aa22.51■■□□□ 1.19
FARP1-211ENST00000594657 SYNJ1O43426 1573 aa22.5■■□□□ 1.19
FARP1-211ENST00000594657 BIVM-ERCC5R4GMW8 1640 aa22.49■■□□□ 1.19
FARP1-211ENST00000594657 WDR97A6NE52 1622 aa22.47■■□□□ 1.19
FARP1-211ENST00000594657 TOP2BQ02880 1626 aa22.44■■□□□ 1.18
FARP1-211ENST00000594657 WRNQ14191 1432 aaPredicted RBP eCLIP22.43■■□□□ 1.18
FARP1-211ENST00000594657 SOGA1O94964 1423 aa22.42■■□□□ 1.18
FARP1-211ENST00000594657 AQRO60306 1485 aaKnown RBP eCLIP22.39■■□□□ 1.17
FARP1-211ENST00000594657 DNAJC5Q9H3Z4 198 aa22.33■■□□□ 1.17
FARP1-211ENST00000594657 TDRD9Q8NDG6 1382 aaKnown RBP22.33■■□□□ 1.17
FARP1-211ENST00000594657 PBRM1Q86U86 1689 aa22.3■■□□□ 1.16
FARP1-211ENST00000594657 CHD1O14646 1710 aa22.28■■□□□ 1.16
FARP1-211ENST00000594657 ABCA5Q8WWZ7 1642 aa22.28■■□□□ 1.16
FARP1-211ENST00000594657 ABCA10Q8WWZ4 1543 aa22.28■■□□□ 1.16
FARP1-211ENST00000594657 SNAPC4Q5SXM2 1469 aa22.21■■□□□ 1.15
FARP1-211ENST00000594657 GAPVD1Q14C86 1478 aa22.19■■□□□ 1.14
FARP1-211ENST00000594657 GRIN2BQ13224 1484 aa22.17■■□□□ 1.14
FARP1-211ENST00000594657 MAGI1Q96QZ7 1491 aaPredicted RBP22.11■■□□□ 1.13
FARP1-211ENST00000594657 OSCARQ8IYS5 282 aa22.08■■□□□ 1.13
FARP1-211ENST00000594657 ADAMTS12P58397 1594 aa22.07■■□□□ 1.12
FARP1-211ENST00000594657 FBLN2P98095 1184 aa22.05■■□□□ 1.12
FARP1-211ENST00000594657 SYNJ2O15056 1496 aa22.03■■□□□ 1.12
FARP1-211ENST00000594657 ERICH3Q5RHP9 1530 aa22.01■■□□□ 1.11
FARP1-211ENST00000594657 CHMP7Q8WUX9 453 aaPredicted RBP21.95■■□□□ 1.1
FARP1-211ENST00000594657 CLASP1Q7Z460 1538 aa21.95■■□□□ 1.1
FARP1-211ENST00000594657 RIMBP3CA6NJZ7 1639 aa21.93■■□□□ 1.1
FARP1-211ENST00000594657 RIMBP3BA6NNM3 1639 aa21.93■■□□□ 1.1
FARP1-211ENST00000594657 GRIN2AQ12879 1464 aa21.93■■□□□ 1.1
FARP1-211ENST00000594657 RIMBP3Q9UFD9 1639 aa21.93■■□□□ 1.1
FARP1-211ENST00000594657 KIF27Q86VH2 1401 aa21.92■■□□□ 1.1
FARP1-211ENST00000594657 FHAD1B1AJZ9 1412 aa21.91■■□□□ 1.1
FARP1-211ENST00000594657 POTEDQ86YR6 584 aa21.9■■□□□ 1.1
FARP1-211ENST00000594657 CEP170Q5SW79 1584 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 126.9 ms