RNA–Protein interactions for RNA: ENST00000593187.5

RTN2-214, Transcript of reticulon 2, humanhuman

TSL 2

Gene RTN2, Length 299 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN2-214ENST00000593187 NISCHQ9Y2I1 1504 aa23.13■■□□□ 1.29
RTN2-214ENST00000593187 ABCC9O60706 1549 aa21.41■■□□□ 1.02
RTN2-214ENST00000593187 CCDC180Q9P1Z9 1646 aa21.12■□□□□ 0.97
RTN2-214ENST00000593187 DNAJC5BQ9UF47 199 aa20.44■□□□□ 0.86
RTN2-214ENST00000593187 RB1CC1Q8TDY2 1594 aa20.23■□□□□ 0.83
RTN2-214ENST00000593187 UNC13AQ9UPW8 1703 aa19.97■□□□□ 0.79
RTN2-214ENST00000593187 NACADO15069 1562 aa19.96■□□□□ 0.79
RTN2-214ENST00000593187 PABPN1Q86U42 306 aaKnown RBP eCLIP19.74■□□□□ 0.75
RTN2-214ENST00000593187 BICRAQ9NZM4 1560 aa19.71■□□□□ 0.75
RTN2-214ENST00000593187 MYO15BQ96JP2 1530 aa19.54■□□□□ 0.72
RTN2-214ENST00000593187 DCAF8L2P0C7V8 631 aa19.47■□□□□ 0.71
RTN2-214ENST00000593187 CC2D2AQ9P2K1 1620 aa19.4■□□□□ 0.7
RTN2-214ENST00000593187 SHROOM4Q9ULL8 1493 aa19.37■□□□□ 0.69
RTN2-214ENST00000593187 CECR2Q9BXF3 1484 aa19.34■□□□□ 0.69
RTN2-214ENST00000593187 EIF4G1Q04637 1599 aaKnown RBP19.23■□□□□ 0.67
RTN2-214ENST00000593187 SCRIBQ14160 1630 aa19.14■□□□□ 0.65
RTN2-214ENST00000593187 DCAF1Q9Y4B6 1507 aa19.11■□□□□ 0.65
RTN2-214ENST00000593187 ZCCHC6Q5VYS8 1495 aaKnown RBP19.11■□□□□ 0.65
RTN2-214ENST00000593187 DNAJC5Q9H3Z4 198 aa19.1■□□□□ 0.65
RTN2-214ENST00000593187 CUX2O14529 1486 aa18.7■□□□□ 0.58
RTN2-214ENST00000593187 ERCC6Q03468 1493 aa18.5■□□□□ 0.55
RTN2-214ENST00000593187 NCAPD3P42695 1498 aa18.37■□□□□ 0.53
RTN2-214ENST00000593187 THOC2Q8NI27 1593 aaKnown RBP18.32■□□□□ 0.52
RTN2-214ENST00000593187 HMGXB3Q12766 1538 aa18.3■□□□□ 0.52
RTN2-214ENST00000593187 NESP48681 1621 aa18.28■□□□□ 0.52
RTN2-214ENST00000593187 ATAD2BQ9ULI0 1458 aa18.26■□□□□ 0.51
RTN2-214ENST00000593187 SMARCA2P51531 1590 aa18.23■□□□□ 0.51
RTN2-214ENST00000593187 SMARCA4P51532 1647 aa18.22■□□□□ 0.51
RTN2-214ENST00000593187 KIF21AQ7Z4S6 1674 aa18.17■□□□□ 0.5
RTN2-214ENST00000593187 LAMC3Q9Y6N6 1575 aa18.13■□□□□ 0.49
RTN2-214ENST00000593187 BAZ1BQ9UIG0 1483 aaKnown RBP18.07■□□□□ 0.48
RTN2-214ENST00000593187 PEG3Q9GZU2 1588 aa18.05■□□□□ 0.48
RTN2-214ENST00000593187 TRIM41Q8WV44 630 aa18.03■□□□□ 0.48
RTN2-214ENST00000593187 BAZ1AQ9NRL2 1556 aaPredicted RBP18■□□□□ 0.47
RTN2-214ENST00000593187 PDS5BQ9NTI5 1447 aa17.91■□□□□ 0.46
RTN2-214ENST00000593187 WDR62O43379 1518 aa17.89■□□□□ 0.45
RTN2-214ENST00000593187 MRC2Q9UBG0 1479 aa17.87■□□□□ 0.45
RTN2-214ENST00000593187 MROH2BQ7Z745 1585 aa17.83■□□□□ 0.44
RTN2-214ENST00000593187 CADPSQ9ULU8 1353 aa17.75■□□□□ 0.43
RTN2-214ENST00000593187 CEP164Q9UPV0 1460 aa17.69■□□□□ 0.42
RTN2-214ENST00000593187 RIMBP3CA6NJZ7 1639 aa17.65■□□□□ 0.42
RTN2-214ENST00000593187 RIMBP3BA6NNM3 1639 aa17.65■□□□□ 0.42
RTN2-214ENST00000593187 RIMBP3Q9UFD9 1639 aa17.65■□□□□ 0.42
RTN2-214ENST00000593187 WIZO95785 1651 aa17.64■□□□□ 0.42
RTN2-214ENST00000593187 FANCD2Q9BXW9 1451 aa17.61■□□□□ 0.41
RTN2-214ENST00000593187 OSCARQ8IYS5 282 aa17.59■□□□□ 0.41
RTN2-214ENST00000593187 PRDM2Q13029 1718 aa17.55■□□□□ 0.4
RTN2-214ENST00000593187 URB2Q14146 1524 aaKnown RBP17.54■□□□□ 0.4
RTN2-214ENST00000593187 CFTRP13569 1480 aa17.5■□□□□ 0.39
RTN2-214ENST00000593187 ARHGEF11O15085 1522 aa17.48■□□□□ 0.39
RTN2-214ENST00000593187 ZNF608Q9ULD9 1512 aaPredicted RBP17.37■□□□□ 0.37
RTN2-214ENST00000593187 CHD1O14646 1710 aa17.37■□□□□ 0.37
RTN2-214ENST00000593187 TOP2AP11388 1531 aaKnown RBP17.37■□□□□ 0.37
RTN2-214ENST00000593187 EIF4G3O43432 1585 aaKnown RBP17.36■□□□□ 0.37
RTN2-214ENST00000593187 IFT140Q96RY7 1462 aa17.33■□□□□ 0.37
RTN2-214ENST00000593187 ARAP1Q96P48 1450 aa17.29■□□□□ 0.36
RTN2-214ENST00000593187 TOPBP1Q92547 1522 aa17.25■□□□□ 0.35
RTN2-214ENST00000593187 RSF1Q96T23 1441 aaPredicted RBP17.21■□□□□ 0.35
RTN2-214ENST00000593187 CYB5RLQ6IPT4 315 aa17.2■□□□□ 0.34
RTN2-214ENST00000593187 TARBP1Q13395 1621 aaKnown RBP17.2■□□□□ 0.34
RTN2-214ENST00000593187 DNMBPQ6XZF7 1577 aa17.19■□□□□ 0.34
RTN2-214ENST00000593187 TRHP20396 242 aaPredicted RBP17.15■□□□□ 0.34
RTN2-214ENST00000593187 ABCC8Q09428 1581 aa17.13■□□□□ 0.33
RTN2-214ENST00000593187 CCDC88BA6NC98 1476 aa17.1■□□□□ 0.33
RTN2-214ENST00000593187 AQRO60306 1485 aaKnown RBP eCLIP17.1■□□□□ 0.33
RTN2-214ENST00000593187 CLASP1Q7Z460 1538 aa17.09■□□□□ 0.33
RTN2-214ENST00000593187 POLA1P09884 1462 aaPredicted RBP17.04■□□□□ 0.32
RTN2-214ENST00000593187 WDR97A6NE52 1622 aa17■□□□□ 0.31
RTN2-214ENST00000593187 AEBP2Q6ZN18 517 aaPredicted RBP17■□□□□ 0.31
RTN2-214ENST00000593187 SYNJ1O43426 1573 aa16.99■□□□□ 0.31
RTN2-214ENST00000593187 SNAPC4Q5SXM2 1469 aa16.98■□□□□ 0.31
RTN2-214ENST00000593187 FBLN2P98095 1184 aa16.97■□□□□ 0.31
RTN2-214ENST00000593187 RAD54L2Q9Y4B4 1467 aa16.94■□□□□ 0.3
RTN2-214ENST00000593187 MAGI1Q96QZ7 1491 aaPredicted RBP16.91■□□□□ 0.3
RTN2-214ENST00000593187 PBRM1Q86U86 1689 aa16.91■□□□□ 0.3
RTN2-214ENST00000593187 TDRD9Q8NDG6 1382 aaKnown RBP16.88■□□□□ 0.29
RTN2-214ENST00000593187 SOGA1O94964 1423 aa16.86■□□□□ 0.29
RTN2-214ENST00000593187 FGD5Q6ZNL6 1462 aa16.86■□□□□ 0.29
RTN2-214ENST00000593187 SYNJ2O15056 1496 aa16.85■□□□□ 0.29
RTN2-214ENST00000593187 GAPVD1Q14C86 1478 aa16.84■□□□□ 0.29
RTN2-214ENST00000593187 GRIN2BQ13224 1484 aa16.82■□□□□ 0.28
RTN2-214ENST00000593187 CUX1P39880 1505 aa16.8■□□□□ 0.28
RTN2-214ENST00000593187 KIF13AQ9H1H9 1805 aa16.8■□□□□ 0.28
RTN2-214ENST00000593187 CHMP7Q8WUX9 453 aaPredicted RBP16.78■□□□□ 0.28
RTN2-214ENST00000593187 ERCC6L2Q5T890 1561 aa16.77■□□□□ 0.27
RTN2-214ENST00000593187 ABCA5Q8WWZ7 1642 aa16.76■□□□□ 0.27
RTN2-214ENST00000593187 SHROOM2Q13796 1616 aa16.69■□□□□ 0.26
RTN2-214ENST00000593187 CEP170Q5SW79 1584 aa16.68■□□□□ 0.26
RTN2-214ENST00000593187 ADAMTS12P58397 1594 aa16.65■□□□□ 0.26
RTN2-214ENST00000593187 ABCA10Q8WWZ4 1543 aa16.65■□□□□ 0.26
RTN2-214ENST00000593187 GRIN2AQ12879 1464 aa16.63■□□□□ 0.25
RTN2-214ENST00000593187 NUP160Q12769 1436 aa16.6■□□□□ 0.25
RTN2-214ENST00000593187 DIP2BQ9P265 1576 aa16.51■□□□□ 0.23
RTN2-214ENST00000593187 BIVM-ERCC5R4GMW8 1640 aa16.48■□□□□ 0.23
RTN2-214ENST00000593187 MAPKBP1O60336 1514 aa16.47■□□□□ 0.23
RTN2-214ENST00000593187 KDM6BO15054 1643 aa16.47■□□□□ 0.23
RTN2-214ENST00000593187 ABCC10Q5T3U5 1492 aa16.47■□□□□ 0.23
RTN2-214ENST00000593187 TSPOAP1O95153 1857 aa16.46■□□□□ 0.22
RTN2-214ENST00000593187 FHAD1B1AJZ9 1412 aa16.45■□□□□ 0.22
RTN2-214ENST00000593187 ADCY10Q96PN6 1610 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms