RNA–Protein interactions for RNA: ENST00000593035.5

TPGS2-219, Transcript of tubulin polyglutamylase complex subunit 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TPGS2, Length 1,727 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPGS2-219ENST00000593035 NISCHQ9Y2I1 1504 aa41.42■■■■■ 4.22
TPGS2-219ENST00000593035 CCDC180Q9P1Z9 1646 aa36.6■■■■□ 3.45
TPGS2-219ENST00000593035 ABCC9O60706 1549 aa35.71■■■■□ 3.31
TPGS2-219ENST00000593035 ZCCHC6Q5VYS8 1495 aaKnown RBP34.65■■■■□ 3.14
TPGS2-219ENST00000593035 DCAF8L2P0C7V8 631 aa34.63■■■■□ 3.13
TPGS2-219ENST00000593035 NACADO15069 1562 aa34.36■■■■□ 3.09
TPGS2-219ENST00000593035 RB1CC1Q8TDY2 1594 aa34.34■■■■□ 3.09
TPGS2-219ENST00000593035 MYO15BQ96JP2 1530 aa34.21■■■■□ 3.07
TPGS2-219ENST00000593035 DCAF1Q9Y4B6 1507 aa34.2■■■■□ 3.07
TPGS2-219ENST00000593035 SHROOM4Q9ULL8 1493 aa33.66■■■□□ 2.98
TPGS2-219ENST00000593035 UNC13AQ9UPW8 1703 aa33.64■■■□□ 2.98
TPGS2-219ENST00000593035 SCRIBQ14160 1630 aa33.57■■■□□ 2.96
TPGS2-219ENST00000593035 PABPN1Q86U42 306 aaKnown RBP eCLIP33.48■■■□□ 2.95
TPGS2-219ENST00000593035 BICRAQ9NZM4 1560 aa33.38■■■□□ 2.93
TPGS2-219ENST00000593035 DNAJC5BQ9UF47 199 aa32.57■■■□□ 2.81
TPGS2-219ENST00000593035 EIF4G1Q04637 1599 aaKnown RBP32.45■■■□□ 2.79
TPGS2-219ENST00000593035 SUPT5HO00267 1087 aaKnown RBP32.4■■■□□ 2.78
TPGS2-219ENST00000593035 CECR2Q9BXF3 1484 aa32.32■■■□□ 2.76
TPGS2-219ENST00000593035 CC2D2AQ9P2K1 1620 aa32.26■■■□□ 2.76
TPGS2-219ENST00000593035 SMARCA4P51532 1647 aa32.08■■■□□ 2.73
TPGS2-219ENST00000593035 BAZ1AQ9NRL2 1556 aaPredicted RBP32.05■■■□□ 2.72
TPGS2-219ENST00000593035 RSF1Q96T23 1441 aaPredicted RBP32.02■■■□□ 2.72
TPGS2-219ENST00000593035 MROH2BQ7Z745 1585 aa31.99■■■□□ 2.71
TPGS2-219ENST00000593035 ATAD2BQ9ULI0 1458 aa31.84■■■□□ 2.69
TPGS2-219ENST00000593035 SMARCA2P51531 1590 aa31.75■■■□□ 2.67
TPGS2-219ENST00000593035 NCAPD3P42695 1498 aa31.74■■■□□ 2.67
TPGS2-219ENST00000593035 PEG3Q9GZU2 1588 aa31.71■■■□□ 2.67
TPGS2-219ENST00000593035 WIZO95785 1651 aa31.66■■■□□ 2.66
TPGS2-219ENST00000593035 HMGXB3Q12766 1538 aa31.59■■■□□ 2.65
TPGS2-219ENST00000593035 BAZ1BQ9UIG0 1483 aaKnown RBP31.59■■■□□ 2.65
TPGS2-219ENST00000593035 TOP2AP11388 1531 aaKnown RBP31.28■■■□□ 2.6
TPGS2-219ENST00000593035 CHIC1Q5VXU3 224 aa31.1■■■□□ 2.57
TPGS2-219ENST00000593035 NESP48681 1621 aa31.01■■■□□ 2.55
TPGS2-219ENST00000593035 CCDC88BA6NC98 1476 aa30.96■■■□□ 2.55
TPGS2-219ENST00000593035 CADPSQ9ULU8 1353 aa30.86■■■□□ 2.53
TPGS2-219ENST00000593035 LAMC3Q9Y6N6 1575 aa30.83■■■□□ 2.53
TPGS2-219ENST00000593035 CFTRP13569 1480 aa30.73■■■□□ 2.51
TPGS2-219ENST00000593035 ERCC6Q03468 1493 aa30.7■■■□□ 2.51
TPGS2-219ENST00000593035 PDS5BQ9NTI5 1447 aa30.63■■■□□ 2.49
TPGS2-219ENST00000593035 KIF21AQ7Z4S6 1674 aa30.59■■■□□ 2.49
TPGS2-219ENST00000593035 FANCD2Q9BXW9 1451 aa30.52■■■□□ 2.48
TPGS2-219ENST00000593035 PRDM2Q13029 1718 aa30.45■■■□□ 2.47
TPGS2-219ENST00000593035 TRIM41Q8WV44 630 aa30.44■■■□□ 2.46
TPGS2-219ENST00000593035 CEP164Q9UPV0 1460 aa30.43■■■□□ 2.46
TPGS2-219ENST00000593035 THOC2Q8NI27 1593 aaKnown RBP30.38■■■□□ 2.45
TPGS2-219ENST00000593035 ABCC8Q09428 1581 aa30.34■■■□□ 2.45
TPGS2-219ENST00000593035 MRC2Q9UBG0 1479 aa30.32■■■□□ 2.44
TPGS2-219ENST00000593035 URB2Q14146 1524 aaKnown RBP30.22■■■□□ 2.43
TPGS2-219ENST00000593035 WDR62O43379 1518 aa30.21■■■□□ 2.43
TPGS2-219ENST00000593035 CUX2O14529 1486 aa30.19■■■□□ 2.42
TPGS2-219ENST00000593035 WRNQ14191 1432 aaPredicted RBP eCLIP30.1■■■□□ 2.41
TPGS2-219ENST00000593035 TOPBP1Q92547 1522 aa30.07■■■□□ 2.4
TPGS2-219ENST00000593035 SYNJ1O43426 1573 aa30.02■■■□□ 2.4
TPGS2-219ENST00000593035 DNMBPQ6XZF7 1577 aa30.02■■■□□ 2.4
TPGS2-219ENST00000593035 CUX1P39880 1505 aa29.97■■■□□ 2.39
TPGS2-219ENST00000593035 LOC105371045A0A1W2PR82 267 aa29.92■■■□□ 2.38
TPGS2-219ENST00000593035 FAM9AQ8IZU1 332 aaPredicted RBP29.91■■■□□ 2.38
TPGS2-219ENST00000593035 TOP2BQ02880 1626 aa29.87■■■□□ 2.37
TPGS2-219ENST00000593035 POLA1P09884 1462 aaPredicted RBP29.84■■■□□ 2.37
TPGS2-219ENST00000593035 BIVM-ERCC5R4GMW8 1640 aa29.84■■■□□ 2.37
TPGS2-219ENST00000593035 FGD5Q6ZNL6 1462 aa29.82■■■□□ 2.36
TPGS2-219ENST00000593035 SOGA1O94964 1423 aa29.79■■■□□ 2.36
TPGS2-219ENST00000593035 IFT140Q96RY7 1462 aa29.77■■■□□ 2.36
TPGS2-219ENST00000593035 RAD54L2Q9Y4B4 1467 aa29.77■■■□□ 2.36
TPGS2-219ENST00000593035 ZNF608Q9ULD9 1512 aaPredicted RBP29.71■■■□□ 2.35
TPGS2-219ENST00000593035 TARBP1Q13395 1621 aaKnown RBP29.7■■■□□ 2.35
TPGS2-219ENST00000593035 RUSC2Q8N2Y8 1516 aa29.69■■■□□ 2.34
TPGS2-219ENST00000593035 EEA1Q15075 1411 aa29.68■■■□□ 2.34
TPGS2-219ENST00000593035 AQRO60306 1485 aaKnown RBP eCLIP29.58■■■□□ 2.331e-6■■□□□ 12.5
TPGS2-219ENST00000593035 TDRD9Q8NDG6 1382 aaKnown RBP29.57■■■□□ 2.32
TPGS2-219ENST00000593035 EIF4G3O43432 1585 aaKnown RBP29.54■■■□□ 2.32
TPGS2-219ENST00000593035 CSRNP3Q8WYN3 585 aa29.52■■■□□ 2.32
TPGS2-219ENST00000593035 WDR97A6NE52 1622 aa29.51■■■□□ 2.32
TPGS2-219ENST00000593035 ABCA10Q8WWZ4 1543 aa29.5■■■□□ 2.31
TPGS2-219ENST00000593035 EHMT2Q96KQ7 1210 aa29.48■■■□□ 2.31
TPGS2-219ENST00000593035 GAPVD1Q14C86 1478 aa29.37■■■□□ 2.29
TPGS2-219ENST00000593035 ABCA5Q8WWZ7 1642 aa29.36■■■□□ 2.29
TPGS2-219ENST00000593035 KIF21BO75037 1637 aa29.34■■■□□ 2.29
TPGS2-219ENST00000593035 KIF27Q86VH2 1401 aa29.31■■■□□ 2.28
TPGS2-219ENST00000593035 GOLGA3Q08378 1498 aa29.3■■■□□ 2.28
TPGS2-219ENST00000593035 GRIN2BQ13224 1484 aa29.3■■■□□ 2.28
TPGS2-219ENST00000593035 SNAPC4Q5SXM2 1469 aa29.27■■■□□ 2.28
TPGS2-219ENST00000593035 PBRM1Q86U86 1689 aa29.27■■■□□ 2.28
TPGS2-219ENST00000593035 TNIKQ9UKE5 1360 aa29.23■■■□□ 2.27
TPGS2-219ENST00000593035 PRXQ9BXM0 1461 aa29.19■■■□□ 2.26
TPGS2-219ENST00000593035 FBLN2P98095 1184 aa29.18■■■□□ 2.26
TPGS2-219ENST00000593035 MAGI1Q96QZ7 1491 aaPredicted RBP29.17■■■□□ 2.26
TPGS2-219ENST00000593035 RAPGEF2Q9Y4G8 1499 aa29.17■■■□□ 2.26
TPGS2-219ENST00000593035 ERICH3Q5RHP9 1530 aa29.13■■■□□ 2.25
TPGS2-219ENST00000593035 UBTFP17480 764 aaKnown RBP29.12■■■□□ 2.25
TPGS2-219ENST00000593035 CHD1O14646 1710 aa29.11■■■□□ 2.25
TPGS2-219ENST00000593035 CEP162Q5TB80 1403 aa29.1■■■□□ 2.25
TPGS2-219ENST00000593035 CHMP7Q8WUX9 453 aaPredicted RBP29.09■■■□□ 2.25
TPGS2-219ENST00000593035 IGF1RP08069 1367 aa29.09■■■□□ 2.25
TPGS2-219ENST00000593035 SYNJ2O15056 1496 aa29.08■■■□□ 2.25
TPGS2-219ENST00000593035 OSCARQ8IYS5 282 aa29.06■■■□□ 2.24
TPGS2-219ENST00000593035 ADAMTS12P58397 1594 aa29.06■■■□□ 2.24
TPGS2-219ENST00000593035 FHAD1B1AJZ9 1412 aa29.02■■■□□ 2.24
TPGS2-219ENST00000593035 DNAJC5Q9H3Z4 198 aa29■■■□□ 2.23
TPGS2-219ENST00000593035 GRIN2AQ12879 1464 aa28.95■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms