RNA–Protein interactions for RNA: ENST00000592843.1

AC004221.1-201, humanhuman

TSL 5 BASIC

Gene AC004221.1, Length 844 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004221.1-201ENST00000592843 NISCHQ9Y2I1 1504 aa22.22■■□□□ 1.15
AC004221.1-201ENST00000592843 ABCC9O60706 1549 aa20.59■□□□□ 0.89
AC004221.1-201ENST00000592843 CCDC180Q9P1Z9 1646 aa20.16■□□□□ 0.82
AC004221.1-201ENST00000592843 DNAJC5BQ9UF47 199 aa19.67■□□□□ 0.74
AC004221.1-201ENST00000592843 RB1CC1Q8TDY2 1594 aa19.4■□□□□ 0.7
AC004221.1-201ENST00000592843 NACADO15069 1562 aa19.15■□□□□ 0.66
AC004221.1-201ENST00000592843 PABPN1Q86U42 306 aaKnown RBP eCLIP19.09■□□□□ 0.65
AC004221.1-201ENST00000592843 UNC13AQ9UPW8 1703 aa19■□□□□ 0.63
AC004221.1-201ENST00000592843 DCAF8L2P0C7V8 631 aa19■□□□□ 0.63
AC004221.1-201ENST00000592843 BICRAQ9NZM4 1560 aa18.84■□□□□ 0.61
AC004221.1-201ENST00000592843 MYO15BQ96JP2 1530 aa18.7■□□□□ 0.58
AC004221.1-201ENST00000592843 CECR2Q9BXF3 1484 aa18.58■□□□□ 0.57
AC004221.1-201ENST00000592843 CC2D2AQ9P2K1 1620 aa18.58■□□□□ 0.56
AC004221.1-201ENST00000592843 SHROOM4Q9ULL8 1493 aa18.52■□□□□ 0.56
AC004221.1-201ENST00000592843 EIF4G1Q04637 1599 aaKnown RBP18.42■□□□□ 0.54
AC004221.1-201ENST00000592843 DNAJC5Q9H3Z4 198 aa18.39■□□□□ 0.53
AC004221.1-201ENST00000592843 SCRIBQ14160 1630 aa18.36■□□□□ 0.53
AC004221.1-201ENST00000592843 ZCCHC6Q5VYS8 1495 aaKnown RBP18.33■□□□□ 0.52
AC004221.1-201ENST00000592843 DCAF1Q9Y4B6 1507 aa18.31■□□□□ 0.52
AC004221.1-201ENST00000592843 CUX2O14529 1486 aa17.91■□□□□ 0.46
AC004221.1-201ENST00000592843 ERCC6Q03468 1493 aa17.82■□□□□ 0.44
AC004221.1-201ENST00000592843 NCAPD3P42695 1498 aa17.66■□□□□ 0.42
AC004221.1-201ENST00000592843 NESP48681 1621 aa17.56■□□□□ 0.4
AC004221.1-201ENST00000592843 ATAD2BQ9ULI0 1458 aa17.56■□□□□ 0.4
AC004221.1-201ENST00000592843 SMARCA2P51531 1590 aa17.51■□□□□ 0.39
AC004221.1-201ENST00000592843 HMGXB3Q12766 1538 aa17.51■□□□□ 0.39
AC004221.1-201ENST00000592843 THOC2Q8NI27 1593 aaKnown RBP17.47■□□□□ 0.39
AC004221.1-201ENST00000592843 TRIM41Q8WV44 630 aa17.45■□□□□ 0.38
AC004221.1-201ENST00000592843 SMARCA4P51532 1647 aa17.45■□□□□ 0.38
AC004221.1-201ENST00000592843 BAZ1BQ9UIG0 1483 aaKnown RBP17.38■□□□□ 0.37
AC004221.1-201ENST00000592843 LAMC3Q9Y6N6 1575 aa17.36■□□□□ 0.37
AC004221.1-201ENST00000592843 KIF21AQ7Z4S6 1674 aa17.36■□□□□ 0.37
AC004221.1-201ENST00000592843 BAZ1AQ9NRL2 1556 aaPredicted RBP17.29■□□□□ 0.36
AC004221.1-201ENST00000592843 PDS5BQ9NTI5 1447 aa17.27■□□□□ 0.35
AC004221.1-201ENST00000592843 PEG3Q9GZU2 1588 aa17.26■□□□□ 0.35
AC004221.1-201ENST00000592843 MRC2Q9UBG0 1479 aa17.16■□□□□ 0.34
AC004221.1-201ENST00000592843 WDR62O43379 1518 aa17.12■□□□□ 0.33
AC004221.1-201ENST00000592843 MROH2BQ7Z745 1585 aa17.12■□□□□ 0.33
AC004221.1-201ENST00000592843 CADPSQ9ULU8 1353 aa17.11■□□□□ 0.33
AC004221.1-201ENST00000592843 OSCARQ8IYS5 282 aa17.03■□□□□ 0.32
AC004221.1-201ENST00000592843 CEP164Q9UPV0 1460 aa17■□□□□ 0.31
AC004221.1-201ENST00000592843 FANCD2Q9BXW9 1451 aa16.94■□□□□ 0.3
AC004221.1-201ENST00000592843 WIZO95785 1651 aa16.92■□□□□ 0.3
AC004221.1-201ENST00000592843 RIMBP3CA6NJZ7 1639 aa16.88■□□□□ 0.29
AC004221.1-201ENST00000592843 RIMBP3BA6NNM3 1639 aa16.88■□□□□ 0.29
AC004221.1-201ENST00000592843 RIMBP3Q9UFD9 1639 aa16.88■□□□□ 0.29
AC004221.1-201ENST00000592843 URB2Q14146 1524 aaKnown RBP16.82■□□□□ 0.28
AC004221.1-201ENST00000592843 CFTRP13569 1480 aa16.82■□□□□ 0.28
AC004221.1-201ENST00000592843 ARHGEF11O15085 1522 aa16.76■□□□□ 0.27
AC004221.1-201ENST00000592843 PRDM2Q13029 1718 aa16.69■□□□□ 0.26
AC004221.1-201ENST00000592843 ZNF608Q9ULD9 1512 aaPredicted RBP16.69■□□□□ 0.26
AC004221.1-201ENST00000592843 IFT140Q96RY7 1462 aa16.67■□□□□ 0.26
AC004221.1-201ENST00000592843 CYB5RLQ6IPT4 315 aa16.67■□□□□ 0.26
AC004221.1-201ENST00000592843 TOP2AP11388 1531 aaKnown RBP16.66■□□□□ 0.26
AC004221.1-201ENST00000592843 TRHP20396 242 aaPredicted RBP16.65■□□□□ 0.26
AC004221.1-201ENST00000592843 RSF1Q96T23 1441 aaPredicted RBP16.6■□□□□ 0.25
AC004221.1-201ENST00000592843 EIF4G3O43432 1585 aaKnown RBP16.6■□□□□ 0.25
AC004221.1-201ENST00000592843 CHD1O14646 1710 aa16.59■□□□□ 0.25
AC004221.1-201ENST00000592843 TOPBP1Q92547 1522 aa16.57■□□□□ 0.24
AC004221.1-201ENST00000592843 ARAP1Q96P48 1450 aa16.56■□□□□ 0.24
AC004221.1-201ENST00000592843 AEBP2Q6ZN18 517 aaPredicted RBP16.51■□□□□ 0.23
AC004221.1-201ENST00000592843 FBLN2P98095 1184 aa16.5■□□□□ 0.23
AC004221.1-201ENST00000592843 ABCC8Q09428 1581 aa16.5■□□□□ 0.23
AC004221.1-201ENST00000592843 AQRO60306 1485 aaKnown RBP eCLIP16.48■□□□□ 0.23
AC004221.1-201ENST00000592843 DNMBPQ6XZF7 1577 aa16.47■□□□□ 0.23
AC004221.1-201ENST00000592843 CCDC88BA6NC98 1476 aa16.47■□□□□ 0.23
AC004221.1-201ENST00000592843 TARBP1Q13395 1621 aaKnown RBP16.46■□□□□ 0.23
AC004221.1-201ENST00000592843 POLA1P09884 1462 aaPredicted RBP16.36■□□□□ 0.21
AC004221.1-201ENST00000592843 CLASP1Q7Z460 1538 aa16.34■□□□□ 0.21
AC004221.1-201ENST00000592843 RAD54L2Q9Y4B4 1467 aa16.32■□□□□ 0.2
AC004221.1-201ENST00000592843 SYNJ1O43426 1573 aa16.31■□□□□ 0.2
AC004221.1-201ENST00000592843 SNAPC4Q5SXM2 1469 aa16.31■□□□□ 0.2
AC004221.1-201ENST00000592843 TDRD9Q8NDG6 1382 aaKnown RBP16.31■□□□□ 0.2
AC004221.1-201ENST00000592843 CHMP7Q8WUX9 453 aaPredicted RBP16.29■□□□□ 0.2
AC004221.1-201ENST00000592843 SOGA1O94964 1423 aa16.28■□□□□ 0.2
AC004221.1-201ENST00000592843 WDR97A6NE52 1622 aa16.26■□□□□ 0.19
AC004221.1-201ENST00000592843 MAGI1Q96QZ7 1491 aaPredicted RBP16.24■□□□□ 0.19
AC004221.1-201ENST00000592843 FGD5Q6ZNL6 1462 aa16.21■□□□□ 0.19
AC004221.1-201ENST00000592843 GRIN2BQ13224 1484 aa16.2■□□□□ 0.18
AC004221.1-201ENST00000592843 GAPVD1Q14C86 1478 aa16.2■□□□□ 0.18
AC004221.1-201ENST00000592843 SYNJ2O15056 1496 aa16.19■□□□□ 0.18
AC004221.1-201ENST00000592843 PBRM1Q86U86 1689 aa16.14■□□□□ 0.18
AC004221.1-201ENST00000592843 CUX1P39880 1505 aa16.12■□□□□ 0.17
AC004221.1-201ENST00000592843 ERCC6L2Q5T890 1561 aa16.06■□□□□ 0.16
AC004221.1-201ENST00000592843 ABCA5Q8WWZ7 1642 aa16.02■□□□□ 0.16
AC004221.1-201ENST00000592843 KIF13AQ9H1H9 1805 aa16.01■□□□□ 0.15
AC004221.1-201ENST00000592843 CEP170Q5SW79 1584 aa16■□□□□ 0.15
AC004221.1-201ENST00000592843 GRIN2AQ12879 1464 aa15.99■□□□□ 0.15
AC004221.1-201ENST00000592843 ABCA10Q8WWZ4 1543 aa15.99■□□□□ 0.15
AC004221.1-201ENST00000592843 ADAMTS12P58397 1594 aa15.94■□□□□ 0.14
AC004221.1-201ENST00000592843 SHROOM2Q13796 1616 aa15.94■□□□□ 0.14
AC004221.1-201ENST00000592843 NUP160Q12769 1436 aa15.94■□□□□ 0.14
AC004221.1-201ENST00000592843 FHAD1B1AJZ9 1412 aa15.85■□□□□ 0.13
AC004221.1-201ENST00000592843 FAM69CQ0P6D2 419 aa15.85■□□□□ 0.13
AC004221.1-201ENST00000592843 WRNQ14191 1432 aaPredicted RBP eCLIP15.84■□□□□ 0.13
AC004221.1-201ENST00000592843 PRG4Q92954 1404 aaPredicted RBP15.84■□□□□ 0.13
AC004221.1-201ENST00000592843 ABCC10Q5T3U5 1492 aa15.83■□□□□ 0.12
AC004221.1-201ENST00000592843 NPM1P06748 294 aaKnown RBP eCLIP15.8■□□□□ 0.12
AC004221.1-201ENST00000592843 KDM6BO15054 1643 aa15.79■□□□□ 0.12
AC004221.1-201ENST00000592843 KDM4FA0A1W2PPD8 638 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms