RNA–Protein interactions for RNA: ENST00000592396.1

SAFB-212, Transcript of scaffold attachment factor B, humanhuman

TSL 4

Gene SAFB, Length 620 nt, Biotype retained intron, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB-212ENST00000592396 NISCHQ9Y2I1 1504 aa15□□□□□ -0.01
SAFB-212ENST00000592396 CCDC180Q9P1Z9 1646 aa13.57□□□□□ -0.24
SAFB-212ENST00000592396 AEBP2Q6ZN18 517 aaPredicted RBP13.11□□□□□ -0.31
SAFB-212ENST00000592396 ABCC9O60706 1549 aa13.11□□□□□ -0.31
SAFB-212ENST00000592396 RB1CC1Q8TDY2 1594 aa12.71□□□□□ -0.37
SAFB-212ENST00000592396 NACADO15069 1562 aa12.65□□□□□ -0.38
SAFB-212ENST00000592396 MYO15BQ96JP2 1530 aa12.57□□□□□ -0.4
SAFB-212ENST00000592396 UNC13AQ9UPW8 1703 aa12.55□□□□□ -0.4
SAFB-212ENST00000592396 ZCCHC6Q5VYS8 1495 aaKnown RBP12.52□□□□□ -0.41
SAFB-212ENST00000592396 CHIC1Q5VXU3 224 aa12.51□□□□□ -0.41
SAFB-212ENST00000592396 DCAF1Q9Y4B6 1507 aa12.47□□□□□ -0.41
SAFB-212ENST00000592396 BICRAQ9NZM4 1560 aa12.3□□□□□ -0.44
SAFB-212ENST00000592396 DCAF8L2P0C7V8 631 aa12.3□□□□□ -0.44
SAFB-212ENST00000592396 SHROOM4Q9ULL8 1493 aa12.25□□□□□ -0.45
SAFB-212ENST00000592396 SCRIBQ14160 1630 aa12.23□□□□□ -0.45
SAFB-212ENST00000592396 PABPN1Q86U42 306 aaKnown RBP eCLIP12.1□□□□□ -0.47
SAFB-212ENST00000592396 EIF4G1Q04637 1599 aaKnown RBP11.99□□□□□ -0.49
SAFB-212ENST00000592396 DNAJC5BQ9UF47 199 aa11.97□□□□□ -0.49
SAFB-212ENST00000592396 CC2D2AQ9P2K1 1620 aa11.96□□□□□ -0.5
SAFB-212ENST00000592396 CECR2Q9BXF3 1484 aa11.82□□□□□ -0.52
SAFB-212ENST00000592396 SMARCA4P51532 1647 aa11.73□□□□□ -0.53
SAFB-212ENST00000592396 BAZ1AQ9NRL2 1556 aaPredicted RBP11.68□□□□□ -0.54
SAFB-212ENST00000592396 SMARCA2P51531 1590 aa11.65□□□□□ -0.54
SAFB-212ENST00000592396 HMGXB3Q12766 1538 aa11.65□□□□□ -0.55
SAFB-212ENST00000592396 PEG3Q9GZU2 1588 aa11.63□□□□□ -0.55
SAFB-212ENST00000592396 NCAPD3P42695 1498 aa11.6□□□□□ -0.55
SAFB-212ENST00000592396 ATAD2BQ9ULI0 1458 aa11.58□□□□□ -0.56
SAFB-212ENST00000592396 MROH2BQ7Z745 1585 aa11.53□□□□□ -0.56
SAFB-212ENST00000592396 BAZ1BQ9UIG0 1483 aaKnown RBP11.51□□□□□ -0.57
SAFB-212ENST00000592396 WIZO95785 1651 aa11.46□□□□□ -0.58
SAFB-212ENST00000592396 LAMC3Q9Y6N6 1575 aa11.41□□□□□ -0.58
SAFB-212ENST00000592396 PRDM2Q13029 1718 aa11.37□□□□□ -0.59
SAFB-212ENST00000592396 KIF21AQ7Z4S6 1674 aa11.36□□□□□ -0.59
SAFB-212ENST00000592396 TOP2AP11388 1531 aaKnown RBP11.35□□□□□ -0.59
SAFB-212ENST00000592396 ERCC6Q03468 1493 aa11.34□□□□□ -0.59
SAFB-212ENST00000592396 NESP48681 1621 aa11.33□□□□□ -0.6
SAFB-212ENST00000592396 THOC2Q8NI27 1593 aaKnown RBP11.33□□□□□ -0.6
SAFB-212ENST00000592396 RSF1Q96T23 1441 aaPredicted RBP11.32□□□□□ -0.6
SAFB-212ENST00000592396 CUX2O14529 1486 aa11.32□□□□□ -0.6
SAFB-212ENST00000592396 PDS5BQ9NTI5 1447 aa11.22□□□□□ -0.61
SAFB-212ENST00000592396 CADPSQ9ULU8 1353 aa11.21□□□□□ -0.61
SAFB-212ENST00000592396 WDR62O43379 1518 aa11.18□□□□□ -0.62
SAFB-212ENST00000592396 CFTRP13569 1480 aa11.18□□□□□ -0.62
SAFB-212ENST00000592396 MRC2Q9UBG0 1479 aa11.17□□□□□ -0.62
SAFB-212ENST00000592396 CEP164Q9UPV0 1460 aa11.17□□□□□ -0.62
SAFB-212ENST00000592396 FANCD2Q9BXW9 1451 aa11.12□□□□□ -0.63
SAFB-212ENST00000592396 SENP3Q9H4L4 574 aaPredicted RBP11.12□□□□□ -0.63
SAFB-212ENST00000592396 CCDC88BA6NC98 1476 aa11.11□□□□□ -0.63
SAFB-212ENST00000592396 URB2Q14146 1524 aaKnown RBP11.04□□□□□ -0.64
SAFB-212ENST00000592396 PHF23Q9BUL5 403 aaPredicted RBP11.01□□□□□ -0.65
SAFB-212ENST00000592396 DNMBPQ6XZF7 1577 aa11□□□□□ -0.65
SAFB-212ENST00000592396 ABCC8Q09428 1581 aa10.98□□□□□ -0.65
SAFB-212ENST00000592396 TOPBP1Q92547 1522 aa10.96□□□□□ -0.65
SAFB-212ENST00000592396 EIF4G3O43432 1585 aaKnown RBP10.93□□□□□ -0.66
SAFB-212ENST00000592396 IFT140Q96RY7 1462 aa10.92□□□□□ -0.66
SAFB-212ENST00000592396 TARBP1Q13395 1621 aaKnown RBP10.91□□□□□ -0.66
SAFB-212ENST00000592396 WDR97A6NE52 1622 aa10.91□□□□□ -0.66
SAFB-212ENST00000592396 DNAJC5Q9H3Z4 198 aa10.9□□□□□ -0.66
SAFB-212ENST00000592396 POLA1P09884 1462 aaPredicted RBP10.86□□□□□ -0.67
SAFB-212ENST00000592396 CHD1O14646 1710 aa10.85□□□□□ -0.67
SAFB-212ENST00000592396 CUX1P39880 1505 aa10.84□□□□□ -0.67
SAFB-212ENST00000592396 BIVM-ERCC5R4GMW8 1640 aa10.84□□□□□ -0.67
SAFB-212ENST00000592396 ZNF608Q9ULD9 1512 aaPredicted RBP10.83□□□□□ -0.68
SAFB-212ENST00000592396 PBRM1Q86U86 1689 aa10.82□□□□□ -0.68
SAFB-212ENST00000592396 FGD5Q6ZNL6 1462 aa10.81□□□□□ -0.68
SAFB-212ENST00000592396 SUPT5HO00267 1087 aaKnown RBP10.81□□□□□ -0.68
SAFB-212ENST00000592396 TOP2BQ02880 1626 aa10.8□□□□□ -0.68
SAFB-212ENST00000592396 ABCA5Q8WWZ7 1642 aa10.78□□□□□ -0.68
SAFB-212ENST00000592396 SYNJ1O43426 1573 aa10.76□□□□□ -0.69
SAFB-212ENST00000592396 RAD54L2Q9Y4B4 1467 aa10.74□□□□□ -0.69
SAFB-212ENST00000592396 SOGA1O94964 1423 aa10.73□□□□□ -0.69
SAFB-212ENST00000592396 ABCA10Q8WWZ4 1543 aa10.73□□□□□ -0.69
SAFB-212ENST00000592396 AQRO60306 1485 aaKnown RBP eCLIP10.72□□□□□ -0.691e-9■■■■□ 25.2
SAFB-212ENST00000592396 MAGI1Q96QZ7 1491 aaPredicted RBP10.72□□□□□ -0.69
SAFB-212ENST00000592396 WRNQ14191 1432 aaPredicted RBP eCLIP10.7□□□□□ -0.7
SAFB-212ENST00000592396 SNAPC4Q5SXM2 1469 aa10.69□□□□□ -0.7
SAFB-212ENST00000592396 RIMBP3CA6NJZ7 1639 aa10.69□□□□□ -0.7
SAFB-212ENST00000592396 RIMBP3BA6NNM3 1639 aa10.69□□□□□ -0.7
SAFB-212ENST00000592396 RIMBP3Q9UFD9 1639 aa10.69□□□□□ -0.7
SAFB-212ENST00000592396 GRIN2BQ13224 1484 aa10.68□□□□□ -0.7
SAFB-212ENST00000592396 ADAMTS12P58397 1594 aa10.68□□□□□ -0.7
SAFB-212ENST00000592396 GAPVD1Q14C86 1478 aa10.66□□□□□ -0.7
SAFB-212ENST00000592396 CLASP1Q7Z460 1538 aa10.65□□□□□ -0.7
SAFB-212ENST00000592396 OSCARQ8IYS5 282 aa10.65□□□□□ -0.7
SAFB-212ENST00000592396 SYNJ2O15056 1496 aa10.65□□□□□ -0.7
SAFB-212ENST00000592396 TDRD9Q8NDG6 1382 aaKnown RBP10.65□□□□□ -0.71
SAFB-212ENST00000592396 ARHGEF11O15085 1522 aa10.63□□□□□ -0.71
SAFB-212ENST00000592396 ERICH3Q5RHP9 1530 aa10.63□□□□□ -0.71
SAFB-212ENST00000592396 CUL7Q14999 1698 aa10.59□□□□□ -0.71
SAFB-212ENST00000592396 GRIN2AQ12879 1464 aa10.57□□□□□ -0.72
SAFB-212ENST00000592396 CEP170Q5SW79 1584 aa10.56□□□□□ -0.72
SAFB-212ENST00000592396 SHROOM2Q13796 1616 aa10.55□□□□□ -0.72
SAFB-212ENST00000592396 RUSC2Q8N2Y8 1516 aa10.53□□□□□ -0.72
SAFB-212ENST00000592396 FHAD1B1AJZ9 1412 aa10.53□□□□□ -0.72
SAFB-212ENST00000592396 ARAP1Q96P48 1450 aa10.53□□□□□ -0.72
SAFB-212ENST00000592396 FBLN2P98095 1184 aa10.52□□□□□ -0.73
SAFB-212ENST00000592396 NUP160Q12769 1436 aa10.51□□□□□ -0.73
SAFB-212ENST00000592396 CHMP7Q8WUX9 453 aaPredicted RBP10.5□□□□□ -0.73
SAFB-212ENST00000592396 KIF27Q86VH2 1401 aa10.48□□□□□ -0.73
SAFB-212ENST00000592396 TRIM41Q8WV44 630 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms