RNA–Protein interactions for RNA: ENST00000592194.1

PRKAR1A-220, Transcript of protein kinase cAMP-dependent type I regulatory subunit alpha, humanhuman

TSL 2

Gene PRKAR1A, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAR1A-220ENST00000592194 NISCHQ9Y2I1 1504 aa33.94■■■■□ 3.02
PRKAR1A-220ENST00000592194 AEBP2Q6ZN18 517 aaPredicted RBP31.67■■■□□ 2.66
PRKAR1A-220ENST00000592194 CHIC1Q5VXU3 224 aa30.62■■■□□ 2.49
PRKAR1A-220ENST00000592194 CCDC180Q9P1Z9 1646 aa30.37■■■□□ 2.45
PRKAR1A-220ENST00000592194 ABCC9O60706 1549 aa30.36■■■□□ 2.45
PRKAR1A-220ENST00000592194 RB1CC1Q8TDY2 1594 aa28.89■■■□□ 2.22
PRKAR1A-220ENST00000592194 NACADO15069 1562 aa28.75■■■□□ 2.19
PRKAR1A-220ENST00000592194 DCAF8L2P0C7V8 631 aa28.65■■■□□ 2.18
PRKAR1A-220ENST00000592194 DNAJC5BQ9UF47 199 aa28.57■■■□□ 2.16
PRKAR1A-220ENST00000592194 MYO15BQ96JP2 1530 aa28.38■■■□□ 2.13
PRKAR1A-220ENST00000592194 PABPN1Q86U42 306 aaKnown RBP eCLIP28.33■■■□□ 2.13
PRKAR1A-220ENST00000592194 UNC13AQ9UPW8 1703 aa28.31■■■□□ 2.12
PRKAR1A-220ENST00000592194 BICRAQ9NZM4 1560 aa28.12■■■□□ 2.09
PRKAR1A-220ENST00000592194 ZCCHC6Q5VYS8 1495 aaKnown RBP28.11■■■□□ 2.09
PRKAR1A-220ENST00000592194 DCAF1Q9Y4B6 1507 aa28.04■■■□□ 2.08
PRKAR1A-220ENST00000592194 SCRIBQ14160 1630 aa27.67■■■□□ 2.02
PRKAR1A-220ENST00000592194 SHROOM4Q9ULL8 1493 aa27.65■■■□□ 2.02
PRKAR1A-220ENST00000592194 CC2D2AQ9P2K1 1620 aa27.44■■□□□ 1.98
PRKAR1A-220ENST00000592194 EIF4G1Q04637 1599 aaKnown RBP27.38■■□□□ 1.97
PRKAR1A-220ENST00000592194 CECR2Q9BXF3 1484 aa27.33■■□□□ 1.97
PRKAR1A-220ENST00000592194 SENP3Q9H4L4 574 aaPredicted RBP27.05■■□□□ 1.92
PRKAR1A-220ENST00000592194 PHF23Q9BUL5 403 aaPredicted RBP26.81■■□□□ 1.88
PRKAR1A-220ENST00000592194 NCAPD3P42695 1498 aa26.58■■□□□ 1.85
PRKAR1A-220ENST00000592194 ATAD2BQ9ULI0 1458 aa26.49■■□□□ 1.83
PRKAR1A-220ENST00000592194 SMARCA4P51532 1647 aa26.43■■□□□ 1.82
PRKAR1A-220ENST00000592194 SMARCA2P51531 1590 aa26.37■■□□□ 1.81
PRKAR1A-220ENST00000592194 HMGXB3Q12766 1538 aa26.31■■□□□ 1.8
PRKAR1A-220ENST00000592194 BAZ1AQ9NRL2 1556 aaPredicted RBP26.3■■□□□ 1.8
PRKAR1A-220ENST00000592194 PEG3Q9GZU2 1588 aa26.2■■□□□ 1.79
PRKAR1A-220ENST00000592194 BAZ1BQ9UIG0 1483 aaKnown RBP26.17■■□□□ 1.78
PRKAR1A-220ENST00000592194 MROH2BQ7Z745 1585 aa26.16■■□□□ 1.78
PRKAR1A-220ENST00000592194 DNAJC5Q9H3Z4 198 aa26.15■■□□□ 1.78
PRKAR1A-220ENST00000592194 ERCC6Q03468 1493 aa26.15■■□□□ 1.78
PRKAR1A-220ENST00000592194 CUX2O14529 1486 aa26.12■■□□□ 1.77
PRKAR1A-220ENST00000592194 NESP48681 1621 aa26.12■■□□□ 1.77
PRKAR1A-220ENST00000592194 LAMC3Q9Y6N6 1575 aa25.91■■□□□ 1.74
PRKAR1A-220ENST00000592194 WIZO95785 1651 aa25.85■■□□□ 1.73
PRKAR1A-220ENST00000592194 THOC2Q8NI27 1593 aaKnown RBP25.81■■□□□ 1.72
PRKAR1A-220ENST00000592194 CADPSQ9ULU8 1353 aa25.77■■□□□ 1.72
PRKAR1A-220ENST00000592194 PDS5BQ9NTI5 1447 aa25.77■■□□□ 1.72
PRKAR1A-220ENST00000592194 KIF21AQ7Z4S6 1674 aa25.76■■□□□ 1.71
PRKAR1A-220ENST00000592194 RSF1Q96T23 1441 aaPredicted RBP25.66■■□□□ 1.7
PRKAR1A-220ENST00000592194 MRC2Q9UBG0 1479 aa25.52■■□□□ 1.68
PRKAR1A-220ENST00000592194 TOP2AP11388 1531 aaKnown RBP25.47■■□□□ 1.67
PRKAR1A-220ENST00000592194 CFTRP13569 1480 aa25.47■■□□□ 1.67
PRKAR1A-220ENST00000592194 WDR62O43379 1518 aa25.47■■□□□ 1.67
PRKAR1A-220ENST00000592194 FANCD2Q9BXW9 1451 aa25.43■■□□□ 1.66
PRKAR1A-220ENST00000592194 CEP164Q9UPV0 1460 aa25.42■■□□□ 1.66
PRKAR1A-220ENST00000592194 CCDC88BA6NC98 1476 aa25.26■■□□□ 1.63
PRKAR1A-220ENST00000592194 URB2Q14146 1524 aaKnown RBP25.24■■□□□ 1.63
PRKAR1A-220ENST00000592194 PRDM2Q13029 1718 aa25.18■■□□□ 1.62
PRKAR1A-220ENST00000592194 FOXD1Q16676 465 aa25.09■■□□□ 1.61
PRKAR1A-220ENST00000592194 OSCARQ8IYS5 282 aa25.01■■□□□ 1.59
PRKAR1A-220ENST00000592194 TOPBP1Q92547 1522 aa24.96■■□□□ 1.59
PRKAR1A-220ENST00000592194 TRIM41Q8WV44 630 aa24.95■■□□□ 1.58
PRKAR1A-220ENST00000592194 IFT140Q96RY7 1462 aa24.93■■□□□ 1.58
PRKAR1A-220ENST00000592194 ZNF608Q9ULD9 1512 aaPredicted RBP24.92■■□□□ 1.58
PRKAR1A-220ENST00000592194 ABCC8Q09428 1581 aa24.92■■□□□ 1.58
PRKAR1A-220ENST00000592194 DNMBPQ6XZF7 1577 aa24.85■■□□□ 1.57
PRKAR1A-220ENST00000592194 TARBP1Q13395 1621 aaKnown RBP24.75■■□□□ 1.55
PRKAR1A-220ENST00000592194 PLPPR3Q6T4P5 718 aa24.75■■□□□ 1.55
PRKAR1A-220ENST00000592194 AQRO60306 1485 aaKnown RBP eCLIP24.72■■□□□ 1.55
PRKAR1A-220ENST00000592194 EIF4G3O43432 1585 aaKnown RBP24.71■■□□□ 1.55
PRKAR1A-220ENST00000592194 POLA1P09884 1462 aaPredicted RBP24.71■■□□□ 1.55
PRKAR1A-220ENST00000592194 RAD54L2Q9Y4B4 1467 aa24.65■■□□□ 1.54
PRKAR1A-220ENST00000592194 SOGA1O94964 1423 aa24.62■■□□□ 1.53
PRKAR1A-220ENST00000592194 RIMBP3CA6NJZ7 1639 aa24.62■■□□□ 1.53
PRKAR1A-220ENST00000592194 RIMBP3BA6NNM3 1639 aa24.62■■□□□ 1.53
PRKAR1A-220ENST00000592194 RIMBP3Q9UFD9 1639 aa24.62■■□□□ 1.53
PRKAR1A-220ENST00000592194 TDRD9Q8NDG6 1382 aaKnown RBP24.57■■□□□ 1.52
PRKAR1A-220ENST00000592194 CUX1P39880 1505 aa24.57■■□□□ 1.52
PRKAR1A-220ENST00000592194 SUPT5HO00267 1087 aaKnown RBP24.56■■□□□ 1.52
PRKAR1A-220ENST00000592194 CHD1O14646 1710 aa24.55■■□□□ 1.52
PRKAR1A-220ENST00000592194 FGD5Q6ZNL6 1462 aa24.55■■□□□ 1.52
PRKAR1A-220ENST00000592194 ARHGEF11O15085 1522 aa24.55■■□□□ 1.52
PRKAR1A-220ENST00000592194 FBLN2P98095 1184 aa24.52■■□□□ 1.52
PRKAR1A-220ENST00000592194 WDR97A6NE52 1622 aa24.45■■□□□ 1.5
PRKAR1A-220ENST00000592194 CYB5RLQ6IPT4 315 aa24.42■■□□□ 1.5
PRKAR1A-220ENST00000592194 SNAPC4Q5SXM2 1469 aa24.4■■□□□ 1.5
PRKAR1A-220ENST00000592194 GRIN2BQ13224 1484 aa24.37■■□□□ 1.49
PRKAR1A-220ENST00000592194 CHMP7Q8WUX9 453 aaPredicted RBP24.36■■□□□ 1.49
PRKAR1A-220ENST00000592194 MAGI1Q96QZ7 1491 aaPredicted RBP24.35■■□□□ 1.49
PRKAR1A-220ENST00000592194 ARAP1Q96P48 1450 aa24.32■■□□□ 1.48
PRKAR1A-220ENST00000592194 GAPVD1Q14C86 1478 aa24.31■■□□□ 1.48
PRKAR1A-220ENST00000592194 ABCA10Q8WWZ4 1543 aa24.3■■□□□ 1.48
PRKAR1A-220ENST00000592194 CLASP1Q7Z460 1538 aa24.29■■□□□ 1.48
PRKAR1A-220ENST00000592194 SYNJ2O15056 1496 aa24.27■■□□□ 1.48
PRKAR1A-220ENST00000592194 PBRM1Q86U86 1689 aa24.26■■□□□ 1.47
PRKAR1A-220ENST00000592194 SYNJ1O43426 1573 aa24.24■■□□□ 1.47
PRKAR1A-220ENST00000592194 ABCA5Q8WWZ7 1642 aa24.23■■□□□ 1.47
PRKAR1A-220ENST00000592194 WRNQ14191 1432 aaPredicted RBP eCLIP24.19■■□□□ 1.46
PRKAR1A-220ENST00000592194 TOP2BQ02880 1626 aa24.17■■□□□ 1.46
PRKAR1A-220ENST00000592194 BIVM-ERCC5R4GMW8 1640 aa24.17■■□□□ 1.46
PRKAR1A-220ENST00000592194 TRHP20396 242 aaPredicted RBP24.08■■□□□ 1.45
PRKAR1A-220ENST00000592194 GRIN2AQ12879 1464 aa24.06■■□□□ 1.44
PRKAR1A-220ENST00000592194 ADAMTS12P58397 1594 aa24.02■■□□□ 1.44
PRKAR1A-220ENST00000592194 FHAD1B1AJZ9 1412 aa24■■□□□ 1.43
PRKAR1A-220ENST00000592194 NUP160Q12769 1436 aa24■■□□□ 1.43
PRKAR1A-220ENST00000592194 ERICH3Q5RHP9 1530 aa23.98■■□□□ 1.43
PRKAR1A-220ENST00000592194 CEP170Q5SW79 1584 aa23.97■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 106.9 ms