RNA–Protein interactions for RNA: ENST00000590833.1

SRP68-209, Transcript of signal recognition particle 68, humanhuman

TSL 2

Gene SRP68, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP68-209ENST00000590833 AEBP2Q6ZN18 517 aaPredicted RBP17.5■□□□□ 0.39
SRP68-209ENST00000590833 CHIC1Q5VXU3 224 aa16.5■□□□□ 0.23
SRP68-209ENST00000590833 NISCHQ9Y2I1 1504 aa16.14■□□□□ 0.18
SRP68-209ENST00000590833 SENP3Q9H4L4 574 aaPredicted RBP14.88□□□□□ -0.03
SRP68-209ENST00000590833 PHF23Q9BUL5 403 aaPredicted RBP14.71□□□□□ -0.05
SRP68-209ENST00000590833 ABCC9O60706 1549 aa14.63□□□□□ -0.07
SRP68-209ENST00000590833 CCDC180Q9P1Z9 1646 aa14.53□□□□□ -0.08
SRP68-209ENST00000590833 RB1CC1Q8TDY2 1594 aa13.98□□□□□ -0.17
SRP68-209ENST00000590833 FOXD1Q16676 465 aa13.92□□□□□ -0.18
SRP68-209ENST00000590833 DNAJC5BQ9UF47 199 aa13.92□□□□□ -0.18
SRP68-209ENST00000590833 NACADO15069 1562 aa13.88□□□□□ -0.19
SRP68-209ENST00000590833 MYO15BQ96JP2 1530 aa13.74□□□□□ -0.21
SRP68-209ENST00000590833 DCAF8L2P0C7V8 631 aa13.68□□□□□ -0.22
SRP68-209ENST00000590833 PABPN1Q86U42 306 aaKnown RBP eCLIP13.63□□□□□ -0.23
SRP68-209ENST00000590833 SHROOM4Q9ULL8 1493 aa13.54□□□□□ -0.24
SRP68-209ENST00000590833 BICRAQ9NZM4 1560 aa13.45□□□□□ -0.26
SRP68-209ENST00000590833 DCAF1Q9Y4B6 1507 aa13.44□□□□□ -0.26
SRP68-209ENST00000590833 UNC13AQ9UPW8 1703 aa13.39□□□□□ -0.27
SRP68-209ENST00000590833 ZCCHC6Q5VYS8 1495 aaKnown RBP13.31□□□□□ -0.28
SRP68-209ENST00000590833 CECR2Q9BXF3 1484 aa13.29□□□□□ -0.28
SRP68-209ENST00000590833 CC2D2AQ9P2K1 1620 aa13.22□□□□□ -0.29
SRP68-209ENST00000590833 EIF4G1Q04637 1599 aaKnown RBP13.19□□□□□ -0.3
SRP68-209ENST00000590833 PLPPR3Q6T4P5 718 aa13.13□□□□□ -0.31
SRP68-209ENST00000590833 DNAJC5Q9H3Z4 198 aa13.11□□□□□ -0.31
SRP68-209ENST00000590833 SCRIBQ14160 1630 aa13.1□□□□□ -0.31
SRP68-209ENST00000590833 MSH5O43196 834 aa13.01□□□□□ -0.33
SRP68-209ENST00000590833 PIAS4Q8N2W9 510 aaPredicted RBP12.98□□□□□ -0.33
SRP68-209ENST00000590833 PPP6R1Q9UPN7 881 aa12.98□□□□□ -0.33
SRP68-209ENST00000590833 ADRA2BP18089 450 aa12.94□□□□□ -0.34
SRP68-209ENST00000590833 POTEDQ86YR6 584 aa12.91□□□□□ -0.34
SRP68-209ENST00000590833 CUX2O14529 1486 aa12.87□□□□□ -0.35
SRP68-209ENST00000590833 NCAPD3P42695 1498 aa12.85□□□□□ -0.35
SRP68-209ENST00000590833 ERCC6Q03468 1493 aa12.74□□□□□ -0.37
SRP68-209ENST00000590833 ATAD2BQ9ULI0 1458 aa12.71□□□□□ -0.38
SRP68-209ENST00000590833 SMARCA2P51531 1590 aa12.69□□□□□ -0.38
SRP68-209ENST00000590833 HMGXB3Q12766 1538 aa12.67□□□□□ -0.38
SRP68-209ENST00000590833 BAZ1AQ9NRL2 1556 aaPredicted RBP12.56□□□□□ -0.4
SRP68-209ENST00000590833 PDS5BQ9NTI5 1447 aa12.55□□□□□ -0.4
SRP68-209ENST00000590833 BAZ1BQ9UIG0 1483 aaKnown RBP12.55□□□□□ -0.4
SRP68-209ENST00000590833 PEG3Q9GZU2 1588 aa12.55□□□□□ -0.4
SRP68-209ENST00000590833 SMARCA4P51532 1647 aa12.55□□□□□ -0.4
SRP68-209ENST00000590833 LAMC3Q9Y6N6 1575 aa12.52□□□□□ -0.4
SRP68-209ENST00000590833 NESP48681 1621 aa12.47□□□□□ -0.41
SRP68-209ENST00000590833 CADPSQ9ULU8 1353 aa12.44□□□□□ -0.42
SRP68-209ENST00000590833 THOC2Q8NI27 1593 aaKnown RBP12.4□□□□□ -0.42
SRP68-209ENST00000590833 MRC2Q9UBG0 1479 aa12.34□□□□□ -0.43
SRP68-209ENST00000590833 MROH2BQ7Z745 1585 aa12.34□□□□□ -0.43
SRP68-209ENST00000590833 OSCARQ8IYS5 282 aa12.32□□□□□ -0.44
SRP68-209ENST00000590833 WDR62O43379 1518 aa12.29□□□□□ -0.44
SRP68-209ENST00000590833 TRIM41Q8WV44 630 aa12.28□□□□□ -0.44
SRP68-209ENST00000590833 CEP164Q9UPV0 1460 aa12.25□□□□□ -0.45
SRP68-209ENST00000590833 KIF21AQ7Z4S6 1674 aa12.24□□□□□ -0.45
SRP68-209ENST00000590833 CFTRP13569 1480 aa12.23□□□□□ -0.45
SRP68-209ENST00000590833 FANCD2Q9BXW9 1451 aa12.21□□□□□ -0.45
SRP68-209ENST00000590833 RSF1Q96T23 1441 aaPredicted RBP12.11□□□□□ -0.47
SRP68-209ENST00000590833 WIZO95785 1651 aa12.1□□□□□ -0.47
SRP68-209ENST00000590833 ABCC8Q09428 1581 aa12.09□□□□□ -0.47
SRP68-209ENST00000590833 IFT140Q96RY7 1462 aa12.08□□□□□ -0.48
SRP68-209ENST00000590833 TOP2AP11388 1531 aaKnown RBP12.07□□□□□ -0.48
SRP68-209ENST00000590833 URB2Q14146 1524 aaKnown RBP12.06□□□□□ -0.48
SRP68-209ENST00000590833 CCDC88BA6NC98 1476 aa11.95□□□□□ -0.5
SRP68-209ENST00000590833 TOPBP1Q92547 1522 aa11.94□□□□□ -0.5
SRP68-209ENST00000590833 ARHGEF11O15085 1522 aa11.93□□□□□ -0.5
SRP68-209ENST00000590833 CYB5RLQ6IPT4 315 aa11.93□□□□□ -0.5
SRP68-209ENST00000590833 RIMBP3CA6NJZ7 1639 aa11.92□□□□□ -0.5
SRP68-209ENST00000590833 RIMBP3BA6NNM3 1639 aa11.92□□□□□ -0.5
SRP68-209ENST00000590833 RIMBP3Q9UFD9 1639 aa11.92□□□□□ -0.5
SRP68-209ENST00000590833 ZNF608Q9ULD9 1512 aaPredicted RBP11.91□□□□□ -0.5
SRP68-209ENST00000590833 MAPK8IP2Q13387 824 aaPredicted RBP11.91□□□□□ -0.5
SRP68-209ENST00000590833 PRDM2Q13029 1718 aa11.9□□□□□ -0.5
SRP68-209ENST00000590833 DNMBPQ6XZF7 1577 aa11.88□□□□□ -0.51
SRP68-209ENST00000590833 TRHP20396 242 aaPredicted RBP11.85□□□□□ -0.51
SRP68-209ENST00000590833 FBLN2P98095 1184 aa11.84□□□□□ -0.51
SRP68-209ENST00000590833 WDR97A6NE52 1622 aa11.84□□□□□ -0.51
SRP68-209ENST00000590833 AQRO60306 1485 aaKnown RBP eCLIP11.83□□□□□ -0.52
SRP68-209ENST00000590833 CHMP7Q8WUX9 453 aaPredicted RBP11.82□□□□□ -0.52
SRP68-209ENST00000590833 SOGA1O94964 1423 aa11.82□□□□□ -0.52
SRP68-209ENST00000590833 EIF4G3O43432 1585 aaKnown RBP11.81□□□□□ -0.52
SRP68-209ENST00000590833 TARBP1Q13395 1621 aaKnown RBP11.8□□□□□ -0.52
SRP68-209ENST00000590833 DMRT2Q9Y5R5 561 aa11.8□□□□□ -0.52
SRP68-209ENST00000590833 POLA1P09884 1462 aaPredicted RBP11.8□□□□□ -0.52
SRP68-209ENST00000590833 ARAP1Q96P48 1450 aa11.77□□□□□ -0.52
SRP68-209ENST00000590833 MAGI1Q96QZ7 1491 aaPredicted RBP11.77□□□□□ -0.52
SRP68-209ENST00000590833 SCAF1Q9H7N4 1312 aaKnown RBP11.75□□□□□ -0.53
SRP68-209ENST00000590833 TDRD9Q8NDG6 1382 aaKnown RBP11.75□□□□□ -0.53
SRP68-209ENST00000590833 GRIN2BQ13224 1484 aa11.74□□□□□ -0.53
SRP68-209ENST00000590833 SYNJ1O43426 1573 aa11.72□□□□□ -0.53
SRP68-209ENST00000590833 SYNJ2O15056 1496 aa11.71□□□□□ -0.53
SRP68-209ENST00000590833 RAD54L2Q9Y4B4 1467 aa11.7□□□□□ -0.54
SRP68-209ENST00000590833 CLASP1Q7Z460 1538 aa11.69□□□□□ -0.54
SRP68-209ENST00000590833 SNAPC4Q5SXM2 1469 aa11.69□□□□□ -0.54
SRP68-209ENST00000590833 CHD1O14646 1710 aa11.69□□□□□ -0.54
SRP68-209ENST00000590833 FGD5Q6ZNL6 1462 aa11.67□□□□□ -0.54
SRP68-209ENST00000590833 GAPVD1Q14C86 1478 aa11.64□□□□□ -0.55
SRP68-209ENST00000590833 ABCA10Q8WWZ4 1543 aa11.62□□□□□ -0.55
SRP68-209ENST00000590833 CUX1P39880 1505 aa11.6□□□□□ -0.55
SRP68-209ENST00000590833 WRNQ14191 1432 aaPredicted RBP eCLIP11.6□□□□□ -0.55
SRP68-209ENST00000590833 SUPT5HO00267 1087 aaKnown RBP11.59□□□□□ -0.55
SRP68-209ENST00000590833 NUP160Q12769 1436 aa11.55□□□□□ -0.56
SRP68-209ENST00000590833 FHAD1B1AJZ9 1412 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms