RNA–Protein interactions for RNA: ENST00000590271.5

ATP9B-221, Transcript of ATPase phospholipid transporting 9B (putative), humanhuman

TSL 2

Gene ATP9B, Length 1,923 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP9B-221ENST00000590271 AEBP2Q6ZN18 517 aaPredicted RBP14.15□□□□□ -0.14
ATP9B-221ENST00000590271 CHIC1Q5VXU3 224 aa13.65□□□□□ -0.22
ATP9B-221ENST00000590271 NISCHQ9Y2I1 1504 aa13.09□□□□□ -0.31
ATP9B-221ENST00000590271 SENP3Q9H4L4 574 aaPredicted RBP12.5□□□□□ -0.41
ATP9B-221ENST00000590271 POTEDQ86YR6 584 aa12.39□□□□□ -0.43
ATP9B-221ENST00000590271 PHF23Q9BUL5 403 aaPredicted RBP12.23□□□□□ -0.45
ATP9B-221ENST00000590271 PELP1Q8IZL8 1130 aaKnown RBP12.17□□□□□ -0.46
ATP9B-221ENST00000590271 HRCP23327 699 aa12.05□□□□□ -0.48
ATP9B-221ENST00000590271 MYT1Q01538 1121 aa11.88□□□□□ -0.51
ATP9B-221ENST00000590271 EHMT2Q96KQ7 1210 aa11.64□□□□□ -0.55
ATP9B-221ENST00000590271 PCGF6Q9BYE7 350 aa11.58□□□□□ -0.55
ATP9B-221ENST00000590271 FOXD1Q16676 465 aa11.56□□□□□ -0.56
ATP9B-221ENST00000590271 DCAF1Q9Y4B6 1507 aa11.55□□□□□ -0.56
ATP9B-221ENST00000590271 ZEB1P37275 1124 aaPredicted RBP11.52□□□□□ -0.56
ATP9B-221ENST00000590271 PPARGC1BQ86YN6 1023 aaKnown RBP11.48□□□□□ -0.57
ATP9B-221ENST00000590271 PLPPR3Q6T4P5 718 aa11.45□□□□□ -0.58
ATP9B-221ENST00000590271 CCDC180Q9P1Z9 1646 aa11.44□□□□□ -0.58
ATP9B-221ENST00000590271 MYO15BQ96JP2 1530 aa11.42□□□□□ -0.58
ATP9B-221ENST00000590271 SUPT5HO00267 1087 aaKnown RBP11.42□□□□□ -0.58
ATP9B-221ENST00000590271 MSH5O43196 834 aa11.41□□□□□ -0.58
ATP9B-221ENST00000590271 TRIM26Q12899 539 aaPredicted RBP11.39□□□□□ -0.59
ATP9B-221ENST00000590271 SLC24A1O60721 1099 aa11.37□□□□□ -0.59
ATP9B-221ENST00000590271 SCAF1Q9H7N4 1312 aaKnown RBP11.35□□□□□ -0.59
ATP9B-221ENST00000590271 SHROOM4Q9ULL8 1493 aa11.33□□□□□ -0.6
ATP9B-221ENST00000590271 TTBK1Q5TCY1 1321 aaPredicted RBP11.24□□□□□ -0.61
ATP9B-221ENST00000590271 KCNA4P22459 653 aa11.21□□□□□ -0.61
ATP9B-221ENST00000590271 ZCCHC6Q5VYS8 1495 aaKnown RBP11.18□□□□□ -0.62
ATP9B-221ENST00000590271 ACIN1Q9UKV3 1341 aaKnown RBP11.17□□□□□ -0.62
ATP9B-221ENST00000590271 CENPBP07199 599 aaPredicted RBP11.15□□□□□ -0.62
ATP9B-221ENST00000590271 CSRNP3Q8WYN3 585 aa11.08□□□□□ -0.64
ATP9B-221ENST00000590271 LOC105371045A0A1W2PR82 267 aa11□□□□□ -0.65
ATP9B-221ENST00000590271 NEUROD1Q13562 356 aa10.99□□□□□ -0.65
ATP9B-221ENST00000590271 GTF3C3Q9Y5Q9 886 aa10.99□□□□□ -0.65
ATP9B-221ENST00000590271 DIEXFQ68CQ4 756 aaKnown RBP10.88□□□□□ -0.67
ATP9B-221ENST00000590271 ADRA2BP18089 450 aa10.87□□□□□ -0.67
ATP9B-221ENST00000590271 CLSPNQ9HAW4 1339 aa10.84□□□□□ -0.67
ATP9B-221ENST00000590271 RTN4Q9NQC3 1192 aaKnown RBP10.82□□□□□ -0.68
ATP9B-221ENST00000590271 CCER1Q8TC90 406 aaPredicted RBP10.78□□□□□ -0.68
ATP9B-221ENST00000590271 SLC4A1APQ9BWU0 796 aaKnown RBP10.76□□□□□ -0.69
ATP9B-221ENST00000590271 TRIM41Q8WV44 630 aa10.74□□□□□ -0.69
ATP9B-221ENST00000590271 ZNF316A6NFI3 1004 aaPredicted RBP10.69□□□□□ -0.7
ATP9B-221ENST00000590271 ANP32EQ9BTT0 268 aa10.66□□□□□ -0.7
ATP9B-221ENST00000590271 ABCC9O60706 1549 aa10.65□□□□□ -0.7
ATP9B-221ENST00000590271 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.65□□□□□ -0.7
ATP9B-221ENST00000590271 AMER1Q5JTC6 1135 aaPredicted RBP10.64□□□□□ -0.71
ATP9B-221ENST00000590271 BCL11AQ9H165 835 aa10.64□□□□□ -0.71
ATP9B-221ENST00000590271 PIAS4Q8N2W9 510 aaPredicted RBP10.63□□□□□ -0.71
ATP9B-221ENST00000590271 RB1CC1Q8TDY2 1594 aa10.58□□□□□ -0.72
ATP9B-221ENST00000590271 WRNQ14191 1432 aaPredicted RBP eCLIP10.56□□□□□ -0.72
ATP9B-221ENST00000590271 DCAF8L2P0C7V8 631 aa10.54□□□□□ -0.72
ATP9B-221ENST00000590271 YTHDC1Q96MU7 727 aaKnown RBP10.52□□□□□ -0.73
ATP9B-221ENST00000590271 RSF1Q96T23 1441 aaPredicted RBP10.51□□□□□ -0.73
ATP9B-221ENST00000590271 FAM9AQ8IZU1 332 aaPredicted RBP10.48□□□□□ -0.73
ATP9B-221ENST00000590271 MIER1Q8N108 512 aa10.48□□□□□ -0.73
ATP9B-221ENST00000590271 PPP6R1Q9UPN7 881 aa10.48□□□□□ -0.73
ATP9B-221ENST00000590271 SUPT16HQ9Y5B9 1047 aaKnown RBP10.46□□□□□ -0.73
ATP9B-221ENST00000590271 TSHZ2Q9NRE2 1034 aa10.45□□□□□ -0.74
ATP9B-221ENST00000590271 ERICH6Q7L0X2 663 aa10.43□□□□□ -0.74
ATP9B-221ENST00000590271 ZBTB22O15209 634 aa10.41□□□□□ -0.74
ATP9B-221ENST00000590271 MYT1LQ9UL68 1186 aa10.4□□□□□ -0.74
ATP9B-221ENST00000590271 TNIKQ9UKE5 1360 aa10.34□□□□□ -0.75
ATP9B-221ENST00000590271 EEA1Q15075 1411 aa10.33□□□□□ -0.76
ATP9B-221ENST00000590271 CEP162Q5TB80 1403 aa10.33□□□□□ -0.76
ATP9B-221ENST00000590271 PRKCSHP14314 528 aaPredicted RBP10.27□□□□□ -0.76
ATP9B-221ENST00000590271 PPP4R3CPQ6ZMV5 832 aa10.27□□□□□ -0.77
ATP9B-221ENST00000590271 EIF4G1Q04637 1599 aaKnown RBP10.24□□□□□ -0.77
ATP9B-221ENST00000590271 NEFLP07196 543 aa10.22□□□□□ -0.77
ATP9B-221ENST00000590271 RBM19Q9Y4C8 960 aaKnown RBP10.22□□□□□ -0.77
ATP9B-221ENST00000590271 NCBP3Q53F19 620 aaKnown RBP10.21□□□□□ -0.78
ATP9B-221ENST00000590271 SCRIBQ14160 1630 aa10.21□□□□□ -0.78
ATP9B-221ENST00000590271 FANCIQ9NVI1 1328 aa10.2□□□□□ -0.78
ATP9B-221ENST00000590271 CACNB1Q02641 598 aaPredicted RBP10.19□□□□□ -0.78
ATP9B-221ENST00000590271 GOLGA3Q08378 1498 aa10.19□□□□□ -0.78
ATP9B-221ENST00000590271 BAZ1AQ9NRL2 1556 aaPredicted RBP10.19□□□□□ -0.78
ATP9B-221ENST00000590271 NPM3O75607 178 aaKnown RBP10.17□□□□□ -0.78
ATP9B-221ENST00000590271 FKBP8Q14318 412 aa10.14□□□□□ -0.79
ATP9B-221ENST00000590271 APLP2Q06481 763 aa10.13□□□□□ -0.79
ATP9B-221ENST00000590271 HNRNPUL2Q1KMD3 747 aaKnown RBP10.13□□□□□ -0.79
ATP9B-221ENST00000590271 ERICH6BQ5W0A0 696 aa10.13□□□□□ -0.79
ATP9B-221ENST00000590271 MROH2BQ7Z745 1585 aa10.12□□□□□ -0.79
ATP9B-221ENST00000590271 UBTFP17480 764 aaKnown RBP10.11□□□□□ -0.79
ATP9B-221ENST00000590271 WIZO95785 1651 aa10.1□□□□□ -0.79
ATP9B-221ENST00000590271 VPS8Q8N3P4 1428 aa10.1□□□□□ -0.79
ATP9B-221ENST00000590271 DHX57Q6P158 1386 aaKnown RBP10.1□□□□□ -0.79
ATP9B-221ENST00000590271 CCDC88BA6NC98 1476 aa10.09□□□□□ -0.79
ATP9B-221ENST00000590271 CEP164Q9UPV0 1460 aa10.09□□□□□ -0.79
ATP9B-221ENST00000590271 KIF21BO75037 1637 aa10.09□□□□□ -0.79
ATP9B-221ENST00000590271 CDK11AQ9UQ88 783 aaPredicted RBP10.08□□□□□ -0.8
ATP9B-221ENST00000590271 BAZ1BQ9UIG0 1483 aaKnown RBP10.07□□□□□ -0.8
ATP9B-221ENST00000590271 CCER2I3L3R5 266 aa10.06□□□□□ -0.8
ATP9B-221ENST00000590271 ABCC8Q09428 1581 aa10.06□□□□□ -0.8
ATP9B-221ENST00000590271 CECR2Q9BXF3 1484 aa10.05□□□□□ -0.8
ATP9B-221ENST00000590271 BCANQ96GW7 911 aa10.05□□□□□ -0.8
ATP9B-221ENST00000590271 TOP2AP11388 1531 aaKnown RBP10.04□□□□□ -0.8
ATP9B-221ENST00000590271 SOGA1O94964 1423 aa10.04□□□□□ -0.8
ATP9B-221ENST00000590271 CLIP1P30622 1438 aa10.04□□□□□ -0.8
ATP9B-221ENST00000590271 CUX2O14529 1486 aa10.04□□□□□ -0.8
ATP9B-221ENST00000590271 NACADO15069 1562 aa10.03□□□□□ -0.8
ATP9B-221ENST00000590271 DEKP35659 375 aaKnown RBP10.01□□□□□ -0.81
ATP9B-221ENST00000590271 TIMELESSQ9UNS1 1208 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms