RNA–Protein interactions for RNA: ENST00000588409.1

SLC44A2-207, Transcript of solute carrier family 44 member 2, humanhuman

TSL 4

Gene SLC44A2, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A2-207ENST00000588409 NISCHQ9Y2I1 1504 aa22.08■■□□□ 1.13
SLC44A2-207ENST00000588409 ABCC9O60706 1549 aa21.02■□□□□ 0.96
SLC44A2-207ENST00000588409 DNAJC5BQ9UF47 199 aa20.47■□□□□ 0.87
SLC44A2-207ENST00000588409 CCDC180Q9P1Z9 1646 aa20.22■□□□□ 0.83
SLC44A2-207ENST00000588409 RB1CC1Q8TDY2 1594 aa19.58■□□□□ 0.73
SLC44A2-207ENST00000588409 PABPN1Q86U42 306 aaKnown RBP eCLIP19.37■□□□□ 0.69
SLC44A2-207ENST00000588409 UNC13AQ9UPW8 1703 aa19.37■□□□□ 0.69
SLC44A2-207ENST00000588409 DNAJC5Q9H3Z4 198 aa19.28■□□□□ 0.68
SLC44A2-207ENST00000588409 NACADO15069 1562 aa19.23■□□□□ 0.67
SLC44A2-207ENST00000588409 BICRAQ9NZM4 1560 aa19.19■□□□□ 0.66
SLC44A2-207ENST00000588409 CECR2Q9BXF3 1484 aa18.97■□□□□ 0.63
SLC44A2-207ENST00000588409 CC2D2AQ9P2K1 1620 aa18.97■□□□□ 0.63
SLC44A2-207ENST00000588409 DCAF8L2P0C7V8 631 aa18.82■□□□□ 0.6
SLC44A2-207ENST00000588409 EIF4G1Q04637 1599 aaKnown RBP18.72■□□□□ 0.59
SLC44A2-207ENST00000588409 MYO15BQ96JP2 1530 aa18.67■□□□□ 0.58
SLC44A2-207ENST00000588409 SHROOM4Q9ULL8 1493 aa18.65■□□□□ 0.58
SLC44A2-207ENST00000588409 SCRIBQ14160 1630 aa18.41■□□□□ 0.54
SLC44A2-207ENST00000588409 CUX2O14529 1486 aa18.39■□□□□ 0.53
SLC44A2-207ENST00000588409 ZCCHC6Q5VYS8 1495 aaKnown RBP18.16■□□□□ 0.5
SLC44A2-207ENST00000588409 DCAF1Q9Y4B6 1507 aa18.15■□□□□ 0.5
SLC44A2-207ENST00000588409 CHIC1Q5VXU3 224 aa18.15■□□□□ 0.5
SLC44A2-207ENST00000588409 ERCC6Q03468 1493 aa18.12■□□□□ 0.49
SLC44A2-207ENST00000588409 TRIM41Q8WV44 630 aa18.1■□□□□ 0.49
SLC44A2-207ENST00000588409 AEBP2Q6ZN18 517 aaPredicted RBP17.94■□□□□ 0.46
SLC44A2-207ENST00000588409 THOC2Q8NI27 1593 aaKnown RBP17.9■□□□□ 0.46
SLC44A2-207ENST00000588409 NESP48681 1621 aa17.87■□□□□ 0.45
SLC44A2-207ENST00000588409 NCAPD3P42695 1498 aa17.75■□□□□ 0.43
SLC44A2-207ENST00000588409 SMARCA2P51531 1590 aa17.68■□□□□ 0.42
SLC44A2-207ENST00000588409 KIF21AQ7Z4S6 1674 aa17.67■□□□□ 0.42
SLC44A2-207ENST00000588409 ATAD2BQ9ULI0 1458 aa17.63■□□□□ 0.41
SLC44A2-207ENST00000588409 HMGXB3Q12766 1538 aa17.61■□□□□ 0.41
SLC44A2-207ENST00000588409 BAZ1AQ9NRL2 1556 aaPredicted RBP17.54■□□□□ 0.4
SLC44A2-207ENST00000588409 LAMC3Q9Y6N6 1575 aa17.52■□□□□ 0.39
SLC44A2-207ENST00000588409 SMARCA4P51532 1647 aa17.46■□□□□ 0.39
SLC44A2-207ENST00000588409 RIMBP3CA6NJZ7 1639 aa17.39■□□□□ 0.37
SLC44A2-207ENST00000588409 RIMBP3BA6NNM3 1639 aa17.39■□□□□ 0.37
SLC44A2-207ENST00000588409 RIMBP3Q9UFD9 1639 aa17.39■□□□□ 0.37
SLC44A2-207ENST00000588409 BAZ1BQ9UIG0 1483 aaKnown RBP17.38■□□□□ 0.37
SLC44A2-207ENST00000588409 WDR62O43379 1518 aa17.38■□□□□ 0.37
SLC44A2-207ENST00000588409 PDS5BQ9NTI5 1447 aa17.35■□□□□ 0.37
SLC44A2-207ENST00000588409 MRC2Q9UBG0 1479 aa17.35■□□□□ 0.37
SLC44A2-207ENST00000588409 OSCARQ8IYS5 282 aa17.28■□□□□ 0.36
SLC44A2-207ENST00000588409 PEG3Q9GZU2 1588 aa17.28■□□□□ 0.36
SLC44A2-207ENST00000588409 ARHGEF11O15085 1522 aa17.21■□□□□ 0.34
SLC44A2-207ENST00000588409 CADPSQ9ULU8 1353 aa17.15■□□□□ 0.34
SLC44A2-207ENST00000588409 CEP164Q9UPV0 1460 aa17.1■□□□□ 0.33
SLC44A2-207ENST00000588409 MROH2BQ7Z745 1585 aa17.06■□□□□ 0.32
SLC44A2-207ENST00000588409 TRHP20396 242 aaPredicted RBP17.03■□□□□ 0.32
SLC44A2-207ENST00000588409 ARAP1Q96P48 1450 aa17.01■□□□□ 0.31
SLC44A2-207ENST00000588409 FANCD2Q9BXW9 1451 aa17.01■□□□□ 0.31
SLC44A2-207ENST00000588409 URB2Q14146 1524 aaKnown RBP17■□□□□ 0.31
SLC44A2-207ENST00000588409 CYB5RLQ6IPT4 315 aa16.99■□□□□ 0.31
SLC44A2-207ENST00000588409 ZNF608Q9ULD9 1512 aaPredicted RBP16.93■□□□□ 0.3
SLC44A2-207ENST00000588409 CHD1O14646 1710 aa16.89■□□□□ 0.29
SLC44A2-207ENST00000588409 WIZO95785 1651 aa16.85■□□□□ 0.29
SLC44A2-207ENST00000588409 CFTRP13569 1480 aa16.83■□□□□ 0.28
SLC44A2-207ENST00000588409 EIF4G3O43432 1585 aaKnown RBP16.82■□□□□ 0.28
SLC44A2-207ENST00000588409 IFT140Q96RY7 1462 aa16.75■□□□□ 0.27
SLC44A2-207ENST00000588409 RSF1Q96T23 1441 aaPredicted RBP16.74■□□□□ 0.27
SLC44A2-207ENST00000588409 PRDM2Q13029 1718 aa16.73■□□□□ 0.27
SLC44A2-207ENST00000588409 ILDR1Q86SU0 546 aaPredicted RBP16.65■□□□□ 0.26
SLC44A2-207ENST00000588409 CLASP1Q7Z460 1538 aa16.63■□□□□ 0.25
SLC44A2-207ENST00000588409 TOPBP1Q92547 1522 aa16.63■□□□□ 0.25
SLC44A2-207ENST00000588409 TARBP1Q13395 1621 aaKnown RBP16.61■□□□□ 0.25
SLC44A2-207ENST00000588409 AQRO60306 1485 aaKnown RBP eCLIP16.61■□□□□ 0.25
SLC44A2-207ENST00000588409 FBLN2P98095 1184 aa16.53■□□□□ 0.24
SLC44A2-207ENST00000588409 TOP2AP11388 1531 aaKnown RBP16.51■□□□□ 0.23
SLC44A2-207ENST00000588409 DNMBPQ6XZF7 1577 aa16.49■□□□□ 0.23
SLC44A2-207ENST00000588409 SNAPC4Q5SXM2 1469 aa16.44■□□□□ 0.22
SLC44A2-207ENST00000588409 KIF13AQ9H1H9 1805 aa16.44■□□□□ 0.22
SLC44A2-207ENST00000588409 SYNJ1O43426 1573 aa16.43■□□□□ 0.22
SLC44A2-207ENST00000588409 GAPVD1Q14C86 1478 aa16.42■□□□□ 0.22
SLC44A2-207ENST00000588409 POLA1P09884 1462 aaPredicted RBP16.41■□□□□ 0.22
SLC44A2-207ENST00000588409 ABCC8Q09428 1581 aa16.38■□□□□ 0.21
SLC44A2-207ENST00000588409 RAD54L2Q9Y4B4 1467 aa16.37■□□□□ 0.21
SLC44A2-207ENST00000588409 ERCC6L2Q5T890 1561 aa16.37■□□□□ 0.21
SLC44A2-207ENST00000588409 TDRD9Q8NDG6 1382 aaKnown RBP16.34■□□□□ 0.21
SLC44A2-207ENST00000588409 KDM4FA0A1W2PPD8 638 aa16.32■□□□□ 0.2
SLC44A2-207ENST00000588409 CCDC88BA6NC98 1476 aa16.31■□□□□ 0.2
SLC44A2-207ENST00000588409 MAGI1Q96QZ7 1491 aaPredicted RBP16.29■□□□□ 0.2
SLC44A2-207ENST00000588409 SYNJ2O15056 1496 aa16.27■□□□□ 0.19
SLC44A2-207ENST00000588409 WDR97A6NE52 1622 aa16.27■□□□□ 0.19
SLC44A2-207ENST00000588409 CHMP7Q8WUX9 453 aaPredicted RBP16.25■□□□□ 0.19
SLC44A2-207ENST00000588409 PBRM1Q86U86 1689 aa16.24■□□□□ 0.19
SLC44A2-207ENST00000588409 SOGA1O94964 1423 aa16.22■□□□□ 0.19
SLC44A2-207ENST00000588409 GRIN2BQ13224 1484 aa16.2■□□□□ 0.18
SLC44A2-207ENST00000588409 FGD5Q6ZNL6 1462 aa16.18■□□□□ 0.18
SLC44A2-207ENST00000588409 CEP170Q5SW79 1584 aa16.17■□□□□ 0.18
SLC44A2-207ENST00000588409 KDM6BO15054 1643 aa16.13■□□□□ 0.17
SLC44A2-207ENST00000588409 HECW2Q9P2P5 1572 aa16.12■□□□□ 0.17
SLC44A2-207ENST00000588409 SHROOM2Q13796 1616 aa16.12■□□□□ 0.17
SLC44A2-207ENST00000588409 DIP2BQ9P265 1576 aa16.11■□□□□ 0.17
SLC44A2-207ENST00000588409 CUX1P39880 1505 aa16.09■□□□□ 0.17
SLC44A2-207ENST00000588409 ABCC10Q5T3U5 1492 aa16.08■□□□□ 0.16
SLC44A2-207ENST00000588409 ABCA5Q8WWZ7 1642 aa16.07■□□□□ 0.16
SLC44A2-207ENST00000588409 TSPOAP1O95153 1857 aa16.05■□□□□ 0.16
SLC44A2-207ENST00000588409 GRIN2AQ12879 1464 aa16.03■□□□□ 0.16
SLC44A2-207ENST00000588409 NUP160Q12769 1436 aa16.02■□□□□ 0.16
SLC44A2-207ENST00000588409 ADGRL1O94910 1474 aa16.02■□□□□ 0.15
SLC44A2-207ENST00000588409 FAM69CQ0P6D2 419 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms