RNA–Protein interactions for RNA: ENST00000588011.1

SNRPCP20-201, Transcript of small nuclear ribonucleoprotein polypeptide C pseudogene 20, humanhuman

BASIC

Gene SNRPCP20, Length 210 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPCP20-201ENST00000588011 NISCHQ9Y2I1 1504 aa21.08■□□□□ 0.96
SNRPCP20-201ENST00000588011 ABCC9O60706 1549 aa19.44■□□□□ 0.7
SNRPCP20-201ENST00000588011 CCDC180Q9P1Z9 1646 aa19.17■□□□□ 0.66
SNRPCP20-201ENST00000588011 DNAJC5BQ9UF47 199 aa18.67■□□□□ 0.58
SNRPCP20-201ENST00000588011 RB1CC1Q8TDY2 1594 aa18.41■□□□□ 0.54
SNRPCP20-201ENST00000588011 NACADO15069 1562 aa18.21■□□□□ 0.51
SNRPCP20-201ENST00000588011 UNC13AQ9UPW8 1703 aa18.05■□□□□ 0.48
SNRPCP20-201ENST00000588011 PABPN1Q86U42 306 aaKnown RBP eCLIP18■□□□□ 0.47
SNRPCP20-201ENST00000588011 BICRAQ9NZM4 1560 aa17.89■□□□□ 0.45
SNRPCP20-201ENST00000588011 MYO15BQ96JP2 1530 aa17.88■□□□□ 0.45
SNRPCP20-201ENST00000588011 DCAF8L2P0C7V8 631 aa17.83■□□□□ 0.44
SNRPCP20-201ENST00000588011 SHROOM4Q9ULL8 1493 aa17.68■□□□□ 0.42
SNRPCP20-201ENST00000588011 CC2D2AQ9P2K1 1620 aa17.61■□□□□ 0.41
SNRPCP20-201ENST00000588011 CECR2Q9BXF3 1484 aa17.6■□□□□ 0.41
SNRPCP20-201ENST00000588011 DNAJC5Q9H3Z4 198 aa17.52■□□□□ 0.4
SNRPCP20-201ENST00000588011 EIF4G1Q04637 1599 aaKnown RBP17.47■□□□□ 0.39
SNRPCP20-201ENST00000588011 DCAF1Q9Y4B6 1507 aa17.46■□□□□ 0.39
SNRPCP20-201ENST00000588011 ZCCHC6Q5VYS8 1495 aaKnown RBP17.36■□□□□ 0.37
SNRPCP20-201ENST00000588011 SCRIBQ14160 1630 aa17.29■□□□□ 0.36
SNRPCP20-201ENST00000588011 CUX2O14529 1486 aa17.04■□□□□ 0.32
SNRPCP20-201ENST00000588011 ERCC6Q03468 1493 aa16.82■□□□□ 0.28
SNRPCP20-201ENST00000588011 NCAPD3P42695 1498 aa16.81■□□□□ 0.28
SNRPCP20-201ENST00000588011 ATAD2BQ9ULI0 1458 aa16.65■□□□□ 0.26
SNRPCP20-201ENST00000588011 HMGXB3Q12766 1538 aa16.64■□□□□ 0.25
SNRPCP20-201ENST00000588011 SMARCA2P51531 1590 aa16.6■□□□□ 0.25
SNRPCP20-201ENST00000588011 NESP48681 1621 aa16.59■□□□□ 0.25
SNRPCP20-201ENST00000588011 THOC2Q8NI27 1593 aaKnown RBP16.57■□□□□ 0.24
SNRPCP20-201ENST00000588011 SMARCA4P51532 1647 aa16.53■□□□□ 0.24
SNRPCP20-201ENST00000588011 LAMC3Q9Y6N6 1575 aa16.5■□□□□ 0.23
SNRPCP20-201ENST00000588011 PEG3Q9GZU2 1588 aa16.44■□□□□ 0.22
SNRPCP20-201ENST00000588011 BAZ1BQ9UIG0 1483 aaKnown RBP16.44■□□□□ 0.22
SNRPCP20-201ENST00000588011 TRIM41Q8WV44 630 aa16.42■□□□□ 0.22
SNRPCP20-201ENST00000588011 KIF21AQ7Z4S6 1674 aa16.42■□□□□ 0.22
SNRPCP20-201ENST00000588011 BAZ1AQ9NRL2 1556 aaPredicted RBP16.39■□□□□ 0.21
SNRPCP20-201ENST00000588011 PDS5BQ9NTI5 1447 aa16.38■□□□□ 0.21
SNRPCP20-201ENST00000588011 MRC2Q9UBG0 1479 aa16.25■□□□□ 0.19
SNRPCP20-201ENST00000588011 WDR62O43379 1518 aa16.24■□□□□ 0.19
SNRPCP20-201ENST00000588011 CADPSQ9ULU8 1353 aa16.24■□□□□ 0.19
SNRPCP20-201ENST00000588011 MROH2BQ7Z745 1585 aa16.2■□□□□ 0.18
SNRPCP20-201ENST00000588011 OSCARQ8IYS5 282 aa16.16■□□□□ 0.18
SNRPCP20-201ENST00000588011 CEP164Q9UPV0 1460 aa16.09■□□□□ 0.17
SNRPCP20-201ENST00000588011 FANCD2Q9BXW9 1451 aa16.03■□□□□ 0.16
SNRPCP20-201ENST00000588011 RIMBP3CA6NJZ7 1639 aa15.99■□□□□ 0.15
SNRPCP20-201ENST00000588011 RIMBP3BA6NNM3 1639 aa15.99■□□□□ 0.15
SNRPCP20-201ENST00000588011 RIMBP3Q9UFD9 1639 aa15.99■□□□□ 0.15
SNRPCP20-201ENST00000588011 WIZO95785 1651 aa15.99■□□□□ 0.15
SNRPCP20-201ENST00000588011 CFTRP13569 1480 aa15.97■□□□□ 0.15
SNRPCP20-201ENST00000588011 URB2Q14146 1524 aaKnown RBP15.93■□□□□ 0.14
SNRPCP20-201ENST00000588011 ARHGEF11O15085 1522 aa15.89■□□□□ 0.13
SNRPCP20-201ENST00000588011 PRDM2Q13029 1718 aa15.85■□□□□ 0.13
SNRPCP20-201ENST00000588011 IFT140Q96RY7 1462 aa15.8■□□□□ 0.12
SNRPCP20-201ENST00000588011 ZNF608Q9ULD9 1512 aaPredicted RBP15.78■□□□□ 0.12
SNRPCP20-201ENST00000588011 TOP2AP11388 1531 aaKnown RBP15.77■□□□□ 0.11
SNRPCP20-201ENST00000588011 CYB5RLQ6IPT4 315 aa15.75■□□□□ 0.11
SNRPCP20-201ENST00000588011 RSF1Q96T23 1441 aaPredicted RBP15.71■□□□□ 0.11
SNRPCP20-201ENST00000588011 TOPBP1Q92547 1522 aa15.69■□□□□ 0.1
SNRPCP20-201ENST00000588011 CHD1O14646 1710 aa15.69■□□□□ 0.1
SNRPCP20-201ENST00000588011 ARAP1Q96P48 1450 aa15.69■□□□□ 0.1
SNRPCP20-201ENST00000588011 EIF4G3O43432 1585 aaKnown RBP15.69■□□□□ 0.1
SNRPCP20-201ENST00000588011 ABCC8Q09428 1581 aa15.69■□□□□ 0.1
SNRPCP20-201ENST00000588011 TRHP20396 242 aaPredicted RBP15.68■□□□□ 0.1
SNRPCP20-201ENST00000588011 TARBP1Q13395 1621 aaKnown RBP15.61■□□□□ 0.09
SNRPCP20-201ENST00000588011 DNMBPQ6XZF7 1577 aa15.61■□□□□ 0.09
SNRPCP20-201ENST00000588011 CCDC88BA6NC98 1476 aa15.58■□□□□ 0.08
SNRPCP20-201ENST00000588011 AQRO60306 1485 aaKnown RBP eCLIP15.58■□□□□ 0.08
SNRPCP20-201ENST00000588011 AEBP2Q6ZN18 517 aaPredicted RBP15.57■□□□□ 0.08
SNRPCP20-201ENST00000588011 CLASP1Q7Z460 1538 aa15.5■□□□□ 0.07
SNRPCP20-201ENST00000588011 FBLN2P98095 1184 aa15.5■□□□□ 0.07
SNRPCP20-201ENST00000588011 POLA1P09884 1462 aaPredicted RBP15.49■□□□□ 0.07
SNRPCP20-201ENST00000588011 WDR97A6NE52 1622 aa15.48■□□□□ 0.07
SNRPCP20-201ENST00000588011 SYNJ1O43426 1573 aa15.44■□□□□ 0.06
SNRPCP20-201ENST00000588011 MAGI1Q96QZ7 1491 aaPredicted RBP15.41■□□□□ 0.06
SNRPCP20-201ENST00000588011 SOGA1O94964 1423 aa15.41■□□□□ 0.06
SNRPCP20-201ENST00000588011 RAD54L2Q9Y4B4 1467 aa15.4■□□□□ 0.06
SNRPCP20-201ENST00000588011 TDRD9Q8NDG6 1382 aaKnown RBP15.4■□□□□ 0.06
SNRPCP20-201ENST00000588011 SNAPC4Q5SXM2 1469 aa15.4■□□□□ 0.06
SNRPCP20-201ENST00000588011 CHMP7Q8WUX9 453 aaPredicted RBP15.38■□□□□ 0.05
SNRPCP20-201ENST00000588011 SYNJ2O15056 1496 aa15.35■□□□□ 0.05
SNRPCP20-201ENST00000588011 GRIN2BQ13224 1484 aa15.34■□□□□ 0.05
SNRPCP20-201ENST00000588011 GAPVD1Q14C86 1478 aa15.33■□□□□ 0.05
SNRPCP20-201ENST00000588011 FGD5Q6ZNL6 1462 aa15.31■□□□□ 0.04
SNRPCP20-201ENST00000588011 PBRM1Q86U86 1689 aa15.27■□□□□ 0.03
SNRPCP20-201ENST00000588011 CUX1P39880 1505 aa15.24■□□□□ 0.03
SNRPCP20-201ENST00000588011 KIF13AQ9H1H9 1805 aa15.2■□□□□ 0.02
SNRPCP20-201ENST00000588011 ABCA5Q8WWZ7 1642 aa15.17■□□□□ 0.02
SNRPCP20-201ENST00000588011 ABCA10Q8WWZ4 1543 aa15.17■□□□□ 0.02
SNRPCP20-201ENST00000588011 ERCC6L2Q5T890 1561 aa15.16■□□□□ 0.02
SNRPCP20-201ENST00000588011 CEP170Q5SW79 1584 aa15.15■□□□□ 0.02
SNRPCP20-201ENST00000588011 SHROOM2Q13796 1616 aa15.14■□□□□ 0.01
SNRPCP20-201ENST00000588011 GRIN2AQ12879 1464 aa15.14■□□□□ 0.01
SNRPCP20-201ENST00000588011 NUP160Q12769 1436 aa15.13■□□□□ 0.01
SNRPCP20-201ENST00000588011 ADAMTS12P58397 1594 aa15.07■□□□□ 0
SNRPCP20-201ENST00000588011 FHAD1B1AJZ9 1412 aa15.02■□□□□ -0
SNRPCP20-201ENST00000588011 ABCC10Q5T3U5 1492 aa15.01□□□□□ -0.01
SNRPCP20-201ENST00000588011 WRNQ14191 1432 aaPredicted RBP eCLIP15□□□□□ -0.01
SNRPCP20-201ENST00000588011 MAPKBP1O60336 1514 aa14.99□□□□□ -0.01
SNRPCP20-201ENST00000588011 ERICH3Q5RHP9 1530 aa14.98□□□□□ -0.01
SNRPCP20-201ENST00000588011 KDM4FA0A1W2PPD8 638 aa14.98□□□□□ -0.01
SNRPCP20-201ENST00000588011 FAM69CQ0P6D2 419 aa14.97□□□□□ -0.01
SNRPCP20-201ENST00000588011 PRG4Q92954 1404 aaPredicted RBP14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms