RNA–Protein interactions for RNA: ENST00000587513.3

PALM-205, Transcript of paralemmin, humanhuman

TSL 4

Gene PALM, Length 2,290 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALM-205ENST00000587513 NISCHQ9Y2I1 1504 aa34.49■■■■□ 3.11
PALM-205ENST00000587513 PELP1Q8IZL8 1130 aaKnown RBP32.95■■■□□ 2.87
PALM-205ENST00000587513 MYT1Q01538 1121 aa32.17■■■□□ 2.74
PALM-205ENST00000587513 HRCP23327 699 aa31.88■■■□□ 2.69
PALM-205ENST00000587513 PPARGC1BQ86YN6 1023 aaKnown RBP30.85■■■□□ 2.53
PALM-205ENST00000587513 SCAF1Q9H7N4 1312 aaKnown RBP30.8■■■□□ 2.52
PALM-205ENST00000587513 TTBK1Q5TCY1 1321 aaPredicted RBP30.69■■■□□ 2.5
PALM-205ENST00000587513 PCGF6Q9BYE7 350 aa30.31■■■□□ 2.44
PALM-205ENST00000587513 MYO15BQ96JP2 1530 aa29.86■■■□□ 2.37
PALM-205ENST00000587513 ACIN1Q9UKV3 1341 aaKnown RBP29.7■■■□□ 2.35
PALM-205ENST00000587513 CCDC180Q9P1Z9 1646 aa29.64■■■□□ 2.34
PALM-205ENST00000587513 BCL11AQ9H165 835 aa29.59■■■□□ 2.33
PALM-205ENST00000587513 ZEB1P37275 1124 aaPredicted RBP29.56■■■□□ 2.32
PALM-205ENST00000587513 DCAF1Q9Y4B6 1507 aa29.52■■■□□ 2.32
PALM-205ENST00000587513 PRKCSHP14314 528 aaPredicted RBP29.48■■■□□ 2.31
PALM-205ENST00000587513 NEUROD1Q13562 356 aa29.44■■■□□ 2.3
PALM-205ENST00000587513 GTF3C3Q9Y5Q9 886 aa29.41■■■□□ 2.3
PALM-205ENST00000587513 CENPBP07199 599 aaPredicted RBP29.37■■■□□ 2.29
PALM-205ENST00000587513 FAM9AQ8IZU1 332 aaPredicted RBP29.28■■■□□ 2.28
PALM-205ENST00000587513 TRIM26Q12899 539 aaPredicted RBP29.22■■■□□ 2.27
PALM-205ENST00000587513 ZCCHC6Q5VYS8 1495 aaKnown RBP29.1■■■□□ 2.25
PALM-205ENST00000587513 CHIC1Q5VXU3 224 aa29■■■□□ 2.23
PALM-205ENST00000587513 ERICH6Q7L0X2 663 aa28.97■■■□□ 2.23
PALM-205ENST00000587513 SHROOM4Q9ULL8 1493 aa28.93■■■□□ 2.22
PALM-205ENST00000587513 ANP32EQ9BTT0 268 aa28.79■■■□□ 2.2
PALM-205ENST00000587513 APLP2Q06481 763 aa28.78■■■□□ 2.2
PALM-205ENST00000587513 SUPT5HO00267 1087 aaKnown RBP28.73■■■□□ 2.19
PALM-205ENST00000587513 DCAF8L2P0C7V8 631 aa28.55■■■□□ 2.16
PALM-205ENST00000587513 CSRNP3Q8WYN3 585 aa28.4■■■□□ 2.14
PALM-205ENST00000587513 DIEXFQ68CQ4 756 aaKnown RBP28.39■■■□□ 2.14
PALM-205ENST00000587513 LOC105371045A0A1W2PR82 267 aa28.26■■■□□ 2.11
PALM-205ENST00000587513 TSHZ2Q9NRE2 1034 aa28.01■■■□□ 2.07
PALM-205ENST00000587513 CLSPNQ9HAW4 1339 aa27.97■■■□□ 2.07
PALM-205ENST00000587513 TRIM41Q8WV44 630 aa27.94■■■□□ 2.06
PALM-205ENST00000587513 YTHDC1Q96MU7 727 aaKnown RBP27.83■■■□□ 2.05
PALM-205ENST00000587513 SUPT16HQ9Y5B9 1047 aaKnown RBP27.76■■■□□ 2.03
PALM-205ENST00000587513 CCER1Q8TC90 406 aaPredicted RBP27.66■■■□□ 2.02
PALM-205ENST00000587513 ABCC9O60706 1549 aa27.63■■■□□ 2.01
PALM-205ENST00000587513 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.61■■■□□ 2.01
PALM-205ENST00000587513 ZNF316A6NFI3 1004 aaPredicted RBP27.6■■■□□ 2.01
PALM-205ENST00000587513 SCRIBQ14160 1630 aa27.57■■■□□ 2
PALM-205ENST00000587513 ANO8Q9HCE9 1232 aaPredicted RBP27.5■■□□□ 1.99
PALM-205ENST00000587513 MIER1Q8N108 512 aa27.5■■□□□ 1.99
PALM-205ENST00000587513 NACADO15069 1562 aa27.45■■□□□ 1.99
PALM-205ENST00000587513 UBE2Q2Q8WVN8 375 aa27.37■■□□□ 1.97
PALM-205ENST00000587513 MYT1LQ9UL68 1186 aa27.3■■□□□ 1.96
PALM-205ENST00000587513 RBM19Q9Y4C8 960 aaKnown RBP27.2■■□□□ 1.94
PALM-205ENST00000587513 ERICH6BQ5W0A0 696 aa27.15■■□□□ 1.94
PALM-205ENST00000587513 SLC24A1O60721 1099 aa27.12■■□□□ 1.93
PALM-205ENST00000587513 MSH5O43196 834 aa27.1■■□□□ 1.93
PALM-205ENST00000587513 RB1CC1Q8TDY2 1594 aa27.09■■□□□ 1.93
PALM-205ENST00000587513 RSF1Q96T23 1441 aaPredicted RBP27.08■■□□□ 1.93
PALM-205ENST00000587513 SALL2Q9Y467 1007 aaPredicted RBP27.06■■□□□ 1.92
PALM-205ENST00000587513 DEKP35659 375 aaKnown RBP27■■□□□ 1.91
PALM-205ENST00000587513 EIF5BO60841 1220 aaKnown RBP26.97■■□□□ 1.91
PALM-205ENST00000587513 FANCIQ9NVI1 1328 aa26.91■■□□□ 1.9
PALM-205ENST00000587513 CECR2Q9BXF3 1484 aa26.86■■□□□ 1.89
PALM-205ENST00000587513 CCDC136Q96JN2 1154 aa26.81■■□□□ 1.88
PALM-205ENST00000587513 MROH2BQ7Z745 1585 aa26.75■■□□□ 1.87
PALM-205ENST00000587513 DAXXQ9UER7 740 aaPredicted RBP26.7■■□□□ 1.86
PALM-205ENST00000587513 BCANQ96GW7 911 aa26.69■■□□□ 1.86
PALM-205ENST00000587513 UNC13AQ9UPW8 1703 aa26.69■■□□□ 1.86
PALM-205ENST00000587513 FKBP8Q14318 412 aa26.62■■□□□ 1.85
PALM-205ENST00000587513 WIZO95785 1651 aa26.61■■□□□ 1.85
PALM-205ENST00000587513 PKNOX2Q96KN3 472 aa26.6■■□□□ 1.85
PALM-205ENST00000587513 BAZ1AQ9NRL2 1556 aaPredicted RBP26.55■■□□□ 1.84
PALM-205ENST00000587513 ZBTB4Q9P1Z0 1013 aaPredicted RBP26.47■■□□□ 1.83
PALM-205ENST00000587513 WRNQ14191 1432 aaPredicted RBP eCLIP26.39■■□□□ 1.81
PALM-205ENST00000587513 NEFLP07196 543 aa26.39■■□□□ 1.81
PALM-205ENST00000587513 SMARCA4P51532 1647 aa26.38■■□□□ 1.81
PALM-205ENST00000587513 IL27Q8NEV9 243 aa26.37■■□□□ 1.81
PALM-205ENST00000587513 ITGAEP38570 1179 aa26.32■■□□□ 1.8
PALM-205ENST00000587513 BICRAQ9NZM4 1560 aa26.32■■□□□ 1.8
PALM-205ENST00000587513 PLEKHG5O94827 1062 aa26.29■■□□□ 1.8
PALM-205ENST00000587513 PABPN1Q86U42 306 aaKnown RBP eCLIP26.27■■□□□ 1.8
PALM-205ENST00000587513 CDK11AQ9UQ88 783 aaPredicted RBP26.23■■□□□ 1.79
PALM-205ENST00000587513 TOP2AP11388 1531 aaKnown RBP26.23■■□□□ 1.79
PALM-205ENST00000587513 EHMT2Q96KQ7 1210 aa26.22■■□□□ 1.79
PALM-205ENST00000587513 PODXL2Q9NZ53 605 aa26.22■■□□□ 1.79
PALM-205ENST00000587513 RTN4Q9NQC3 1192 aaKnown RBP26.19■■□□□ 1.78
PALM-205ENST00000587513 NOP58Q9Y2X3 529 aaKnown RBP26.15■■□□□ 1.78
PALM-205ENST00000587513 NBR1Q14596 966 aa26.14■■□□□ 1.77
PALM-205ENST00000587513 EIF4G1Q04637 1599 aaKnown RBP26.1■■□□□ 1.77
PALM-205ENST00000587513 KCNH8Q96L42 1107 aa26.07■■□□□ 1.76
PALM-205ENST00000587513 SMARCA2P51531 1590 aa26.05■■□□□ 1.76
PALM-205ENST00000587513 CCDC88BA6NC98 1476 aa26.05■■□□□ 1.76
PALM-205ENST00000587513 C11orf95C9JLR9 678 aaPredicted RBP26.03■■□□□ 1.76
PALM-205ENST00000587513 RTL5Q5HYW3 569 aaPredicted RBP26.03■■□□□ 1.76
PALM-205ENST00000587513 PAK3O75914 559 aaPredicted RBP25.95■■□□□ 1.74
PALM-205ENST00000587513 PEG3Q9GZU2 1588 aa25.93■■□□□ 1.74
PALM-205ENST00000587513 WASHC2AQ641Q2 1341 aa25.91■■□□□ 1.74
PALM-205ENST00000587513 GLIPR1L2Q4G1C9 344 aa25.89■■□□□ 1.74
PALM-205ENST00000587513 WASHC2CQ9Y4E1 1318 aa25.84■■□□□ 1.73
PALM-205ENST00000587513 RSPH6AQ9H0K4 717 aa25.83■■□□□ 1.72
PALM-205ENST00000587513 ABCC8Q09428 1581 aa25.82■■□□□ 1.72
PALM-205ENST00000587513 ZMYND15Q9H091 742 aa25.8■■□□□ 1.72
PALM-205ENST00000587513 CEP162Q5TB80 1403 aa25.78■■□□□ 1.72
PALM-205ENST00000587513 ATAD2BQ9ULI0 1458 aa25.76■■□□□ 1.71
PALM-205ENST00000587513 HNRNPUL2Q1KMD3 747 aaKnown RBP25.76■■□□□ 1.71
PALM-205ENST00000587513 IPO9Q96P70 1041 aaKnown RBP25.68■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms