RNA–Protein interactions for RNA: ENST00000586746.5

POLR2E-204, Transcript of RNA polymerase II subunit E, humanhuman

APPRIS P1 TSL 3 BASIC

Gene POLR2E, Length 1,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2E-204ENST00000586746 NISCHQ9Y2I1 1504 aa32.39■■■□□ 2.78
POLR2E-204ENST00000586746 ABCC9O60706 1549 aa30.38■■■□□ 2.45
POLR2E-204ENST00000586746 CCDC180Q9P1Z9 1646 aa29.56■■■□□ 2.32
POLR2E-204ENST00000586746 DNAJC5BQ9UF47 199 aa29.33■■■□□ 2.29
POLR2E-204ENST00000586746 RB1CC1Q8TDY2 1594 aa28.55■■■□□ 2.16
POLR2E-204ENST00000586746 NACADO15069 1562 aa28.12■■■□□ 2.09
POLR2E-204ENST00000586746 PABPN1Q86U42 306 aaKnown RBP eCLIP28.08■■■□□ 2.09
POLR2E-204ENST00000586746 UNC13AQ9UPW8 1703 aa28.03■■■□□ 2.08
POLR2E-204ENST00000586746 BICRAQ9NZM4 1560 aa27.78■■■□□ 2.04
POLR2E-204ENST00000586746 DNAJC5Q9H3Z4 198 aa27.63■■■□□ 2.01
POLR2E-204ENST00000586746 DCAF8L2P0C7V8 631 aa27.61■■■□□ 2.01
POLR2E-204ENST00000586746 CECR2Q9BXF3 1484 aa27.47■■□□□ 1.99
POLR2E-204ENST00000586746 CC2D2AQ9P2K1 1620 aa27.46■■□□□ 1.99
POLR2E-204ENST00000586746 MYO15BQ96JP2 1530 aa27.42■■□□□ 1.98
POLR2E-204ENST00000586746 SHROOM4Q9ULL8 1493 aa27.29■■□□□ 1.96
POLR2E-204ENST00000586746 EIF4G1Q04637 1599 aaKnown RBP27.15■■□□□ 1.94
POLR2E-204ENST00000586746 SCRIBQ14160 1630 aa26.82■■□□□ 1.88
POLR2E-204ENST00000586746 DCAF1Q9Y4B6 1507 aa26.72■■□□□ 1.87
POLR2E-204ENST00000586746 ZCCHC6Q5VYS8 1495 aaKnown RBP26.65■■□□□ 1.86
POLR2E-204ENST00000586746 CUX2O14529 1486 aa26.62■■□□□ 1.85
POLR2E-204ENST00000586746 ERCC6Q03468 1493 aa26.29■■□□□ 1.8
POLR2E-204ENST00000586746 TRIM41Q8WV44 630 aa25.99■■□□□ 1.75
POLR2E-204ENST00000586746 NCAPD3P42695 1498 aa25.94■■□□□ 1.74
POLR2E-204ENST00000586746 THOC2Q8NI27 1593 aaKnown RBP25.85■■□□□ 1.73
POLR2E-204ENST00000586746 NESP48681 1621 aa25.85■■□□□ 1.73
POLR2E-204ENST00000586746 ATAD2BQ9ULI0 1458 aa25.73■■□□□ 1.71
POLR2E-204ENST00000586746 HMGXB3Q12766 1538 aa25.7■■□□□ 1.7
POLR2E-204ENST00000586746 SMARCA2P51531 1590 aa25.61■■□□□ 1.69
POLR2E-204ENST00000586746 KIF21AQ7Z4S6 1674 aa25.57■■□□□ 1.68
POLR2E-204ENST00000586746 LAMC3Q9Y6N6 1575 aa25.55■■□□□ 1.68
POLR2E-204ENST00000586746 SMARCA4P51532 1647 aa25.51■■□□□ 1.67
POLR2E-204ENST00000586746 BAZ1BQ9UIG0 1483 aaKnown RBP25.41■■□□□ 1.66
POLR2E-204ENST00000586746 PDS5BQ9NTI5 1447 aa25.37■■□□□ 1.65
POLR2E-204ENST00000586746 BAZ1AQ9NRL2 1556 aaPredicted RBP25.35■■□□□ 1.65
POLR2E-204ENST00000586746 PEG3Q9GZU2 1588 aa25.27■■□□□ 1.64
POLR2E-204ENST00000586746 WDR62O43379 1518 aa25.24■■□□□ 1.63
POLR2E-204ENST00000586746 MRC2Q9UBG0 1479 aa25.24■■□□□ 1.63
POLR2E-204ENST00000586746 OSCARQ8IYS5 282 aa25.16■■□□□ 1.62
POLR2E-204ENST00000586746 CADPSQ9ULU8 1353 aa25.08■■□□□ 1.61
POLR2E-204ENST00000586746 RIMBP3CA6NJZ7 1639 aa25.06■■□□□ 1.6
POLR2E-204ENST00000586746 RIMBP3BA6NNM3 1639 aa25.06■■□□□ 1.6
POLR2E-204ENST00000586746 RIMBP3Q9UFD9 1639 aa25.06■■□□□ 1.6
POLR2E-204ENST00000586746 MROH2BQ7Z745 1585 aa24.94■■□□□ 1.58
POLR2E-204ENST00000586746 CEP164Q9UPV0 1460 aa24.94■■□□□ 1.58
POLR2E-204ENST00000586746 ARHGEF11O15085 1522 aa24.84■■□□□ 1.57
POLR2E-204ENST00000586746 FANCD2Q9BXW9 1451 aa24.82■■□□□ 1.56
POLR2E-204ENST00000586746 URB2Q14146 1524 aaKnown RBP24.7■■□□□ 1.54
POLR2E-204ENST00000586746 TRHP20396 242 aaPredicted RBP24.64■■□□□ 1.54
POLR2E-204ENST00000586746 AEBP2Q6ZN18 517 aaPredicted RBP24.64■■□□□ 1.54
POLR2E-204ENST00000586746 WIZO95785 1651 aa24.64■■□□□ 1.53
POLR2E-204ENST00000586746 CYB5RLQ6IPT4 315 aa24.63■■□□□ 1.53
POLR2E-204ENST00000586746 CFTRP13569 1480 aa24.62■■□□□ 1.53
POLR2E-204ENST00000586746 ZNF608Q9ULD9 1512 aaPredicted RBP24.54■■□□□ 1.52
POLR2E-204ENST00000586746 ARAP1Q96P48 1450 aa24.53■■□□□ 1.52
POLR2E-204ENST00000586746 IFT140Q96RY7 1462 aa24.47■■□□□ 1.51
POLR2E-204ENST00000586746 CHD1O14646 1710 aa24.45■■□□□ 1.5
POLR2E-204ENST00000586746 PRDM2Q13029 1718 aa24.45■■□□□ 1.5
POLR2E-204ENST00000586746 EIF4G3O43432 1585 aaKnown RBP24.4■■□□□ 1.5
POLR2E-204ENST00000586746 RSF1Q96T23 1441 aaPredicted RBP24.35■■□□□ 1.49
POLR2E-204ENST00000586746 TOPBP1Q92547 1522 aa24.26■■□□□ 1.47
POLR2E-204ENST00000586746 TOP2AP11388 1531 aaKnown RBP24.24■■□□□ 1.47
POLR2E-204ENST00000586746 AQRO60306 1485 aaKnown RBP eCLIP24.17■■□□□ 1.462e-7■■■■□ 26
POLR2E-204ENST00000586746 TARBP1Q13395 1621 aaKnown RBP24.16■■□□□ 1.46
POLR2E-204ENST00000586746 ABCC8Q09428 1581 aa24.13■■□□□ 1.45
POLR2E-204ENST00000586746 FBLN2P98095 1184 aa24.13■■□□□ 1.45
POLR2E-204ENST00000586746 DNMBPQ6XZF7 1577 aa24.11■■□□□ 1.45
POLR2E-204ENST00000586746 CLASP1Q7Z460 1538 aa24.1■■□□□ 1.45
POLR2E-204ENST00000586746 SYNJ1O43426 1573 aa23.97■■□□□ 1.43
POLR2E-204ENST00000586746 CCDC88BA6NC98 1476 aa23.94■■□□□ 1.42
POLR2E-204ENST00000586746 POLA1P09884 1462 aaPredicted RBP23.94■■□□□ 1.42
POLR2E-204ENST00000586746 SNAPC4Q5SXM2 1469 aa23.92■■□□□ 1.42
POLR2E-204ENST00000586746 WDR97A6NE52 1622 aa23.86■■□□□ 1.41
POLR2E-204ENST00000586746 GAPVD1Q14C86 1478 aa23.86■■□□□ 1.41
POLR2E-204ENST00000586746 RAD54L2Q9Y4B4 1467 aa23.86■■□□□ 1.41
POLR2E-204ENST00000586746 TDRD9Q8NDG6 1382 aaKnown RBP23.84■■□□□ 1.41
POLR2E-204ENST00000586746 MAGI1Q96QZ7 1491 aaPredicted RBP23.81■■□□□ 1.4
POLR2E-204ENST00000586746 CHMP7Q8WUX9 453 aaPredicted RBP23.81■■□□□ 1.4
POLR2E-204ENST00000586746 SOGA1O94964 1423 aa23.78■■□□□ 1.4
POLR2E-204ENST00000586746 ILDR1Q86SU0 546 aaPredicted RBP23.75■■□□□ 1.39
POLR2E-204ENST00000586746 SYNJ2O15056 1496 aa23.75■■□□□ 1.39
POLR2E-204ENST00000586746 KIF13AQ9H1H9 1805 aa23.73■■□□□ 1.39
POLR2E-204ENST00000586746 GRIN2BQ13224 1484 aa23.7■■□□□ 1.38
POLR2E-204ENST00000586746 PBRM1Q86U86 1689 aa23.66■■□□□ 1.38
POLR2E-204ENST00000586746 FGD5Q6ZNL6 1462 aa23.65■■□□□ 1.38
POLR2E-204ENST00000586746 ERCC6L2Q5T890 1561 aa23.64■■□□□ 1.37
POLR2E-204ENST00000586746 CUX1P39880 1505 aa23.5■■□□□ 1.35
POLR2E-204ENST00000586746 CEP170Q5SW79 1584 aa23.5■■□□□ 1.35
POLR2E-204ENST00000586746 KDM4FA0A1W2PPD8 638 aa23.49■■□□□ 1.35
POLR2E-204ENST00000586746 SHROOM2Q13796 1616 aa23.44■■□□□ 1.34
POLR2E-204ENST00000586746 ABCA5Q8WWZ7 1642 aa23.44■■□□□ 1.34
POLR2E-204ENST00000586746 GRIN2AQ12879 1464 aa23.41■■□□□ 1.34
POLR2E-204ENST00000586746 NUP160Q12769 1436 aa23.38■■□□□ 1.33
POLR2E-204ENST00000586746 ABCC10Q5T3U5 1492 aa23.36■■□□□ 1.33
POLR2E-204ENST00000586746 KDM6BO15054 1643 aa23.35■■□□□ 1.33
POLR2E-204ENST00000586746 ABCA10Q8WWZ4 1543 aa23.34■■□□□ 1.33
POLR2E-204ENST00000586746 ADAMTS12P58397 1594 aa23.32■■□□□ 1.32
POLR2E-204ENST00000586746 FAM69CQ0P6D2 419 aa23.32■■□□□ 1.32
POLR2E-204ENST00000586746 DIP2BQ9P265 1576 aa23.31■■□□□ 1.32
POLR2E-204ENST00000586746 MAPKBP1O60336 1514 aa23.27■■□□□ 1.32
POLR2E-204ENST00000586746 TSPOAP1O95153 1857 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms