RNA–Protein interactions for RNA: ENST00000586117.5

RANBP3-205, Transcript of RAN binding protein 3, humanhuman

TSL 4

Gene RANBP3, Length 524 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-205ENST00000586117 NISCHQ9Y2I1 1504 aa27.18■■□□□ 1.94
RANBP3-205ENST00000586117 ABCC9O60706 1549 aa25.41■■□□□ 1.66
RANBP3-205ENST00000586117 CCDC180Q9P1Z9 1646 aa24.7■■□□□ 1.54
RANBP3-205ENST00000586117 DNAJC5BQ9UF47 199 aa24.45■■□□□ 1.5
RANBP3-205ENST00000586117 RB1CC1Q8TDY2 1594 aa23.88■■□□□ 1.41
RANBP3-205ENST00000586117 PABPN1Q86U42 306 aaKnown RBP eCLIP23.56■■□□□ 1.36
RANBP3-205ENST00000586117 NACADO15069 1562 aa23.54■■□□□ 1.36
RANBP3-205ENST00000586117 DCAF8L2P0C7V8 631 aa23.31■■□□□ 1.32
RANBP3-205ENST00000586117 UNC13AQ9UPW8 1703 aa23.3■■□□□ 1.32
RANBP3-205ENST00000586117 BICRAQ9NZM4 1560 aa23.17■■□□□ 1.3
RANBP3-205ENST00000586117 DNAJC5Q9H3Z4 198 aa23■■□□□ 1.27
RANBP3-205ENST00000586117 CECR2Q9BXF3 1484 aa22.98■■□□□ 1.27
RANBP3-205ENST00000586117 MYO15BQ96JP2 1530 aa22.96■■□□□ 1.27
RANBP3-205ENST00000586117 CC2D2AQ9P2K1 1620 aa22.91■■□□□ 1.26
RANBP3-205ENST00000586117 SHROOM4Q9ULL8 1493 aa22.82■■□□□ 1.24
RANBP3-205ENST00000586117 EIF4G1Q04637 1599 aaKnown RBP22.68■■□□□ 1.22
RANBP3-205ENST00000586117 SCRIBQ14160 1630 aa22.47■■□□□ 1.19
RANBP3-205ENST00000586117 DCAF1Q9Y4B6 1507 aa22.41■■□□□ 1.18
RANBP3-205ENST00000586117 ZCCHC6Q5VYS8 1495 aaKnown RBP22.37■■□□□ 1.17
RANBP3-205ENST00000586117 CUX2O14529 1486 aa22.21■■□□□ 1.15
RANBP3-205ENST00000586117 ERCC6Q03468 1493 aa22.03■■□□□ 1.12
RANBP3-205ENST00000586117 NCAPD3P42695 1498 aa21.73■■□□□ 1.07
RANBP3-205ENST00000586117 TRIM41Q8WV44 630 aa21.72■■□□□ 1.07
RANBP3-205ENST00000586117 NESP48681 1621 aa21.61■■□□□ 1.05
RANBP3-205ENST00000586117 ATAD2BQ9ULI0 1458 aa21.57■■□□□ 1.04
RANBP3-205ENST00000586117 THOC2Q8NI27 1593 aaKnown RBP21.53■■□□□ 1.04
RANBP3-205ENST00000586117 HMGXB3Q12766 1538 aa21.5■■□□□ 1.03
RANBP3-205ENST00000586117 SMARCA2P51531 1590 aa21.48■■□□□ 1.03
RANBP3-205ENST00000586117 SMARCA4P51532 1647 aa21.36■■□□□ 1.01
RANBP3-205ENST00000586117 LAMC3Q9Y6N6 1575 aa21.36■■□□□ 1.01
RANBP3-205ENST00000586117 BAZ1BQ9UIG0 1483 aaKnown RBP21.33■■□□□ 1.01
RANBP3-205ENST00000586117 KIF21AQ7Z4S6 1674 aa21.31■■□□□ 1
RANBP3-205ENST00000586117 PDS5BQ9NTI5 1447 aa21.29■■□□□ 1
RANBP3-205ENST00000586117 BAZ1AQ9NRL2 1556 aaPredicted RBP21.16■□□□□ 0.98
RANBP3-205ENST00000586117 PEG3Q9GZU2 1588 aa21.14■□□□□ 0.98
RANBP3-205ENST00000586117 MRC2Q9UBG0 1479 aa21.13■□□□□ 0.97
RANBP3-205ENST00000586117 WDR62O43379 1518 aa21.09■□□□□ 0.97
RANBP3-205ENST00000586117 OSCARQ8IYS5 282 aa21.09■□□□□ 0.97
RANBP3-205ENST00000586117 CADPSQ9ULU8 1353 aa21.05■□□□□ 0.96
RANBP3-205ENST00000586117 MROH2BQ7Z745 1585 aa20.93■□□□□ 0.94
RANBP3-205ENST00000586117 CEP164Q9UPV0 1460 aa20.9■□□□□ 0.94
RANBP3-205ENST00000586117 RIMBP3CA6NJZ7 1639 aa20.86■□□□□ 0.93
RANBP3-205ENST00000586117 RIMBP3BA6NNM3 1639 aa20.86■□□□□ 0.93
RANBP3-205ENST00000586117 RIMBP3Q9UFD9 1639 aa20.86■□□□□ 0.93
RANBP3-205ENST00000586117 FANCD2Q9BXW9 1451 aa20.81■□□□□ 0.92
RANBP3-205ENST00000586117 ARHGEF11O15085 1522 aa20.73■□□□□ 0.91
RANBP3-205ENST00000586117 TRHP20396 242 aaPredicted RBP20.67■□□□□ 0.9
RANBP3-205ENST00000586117 URB2Q14146 1524 aaKnown RBP20.67■□□□□ 0.9
RANBP3-205ENST00000586117 WIZO95785 1651 aa20.65■□□□□ 0.9
RANBP3-205ENST00000586117 CFTRP13569 1480 aa20.65■□□□□ 0.9
RANBP3-205ENST00000586117 CYB5RLQ6IPT4 315 aa20.65■□□□□ 0.9
RANBP3-205ENST00000586117 AEBP2Q6ZN18 517 aaPredicted RBP20.61■□□□□ 0.89
RANBP3-205ENST00000586117 ZNF608Q9ULD9 1512 aaPredicted RBP20.53■□□□□ 0.88
RANBP3-205ENST00000586117 IFT140Q96RY7 1462 aa20.51■□□□□ 0.87
RANBP3-205ENST00000586117 ARAP1Q96P48 1450 aa20.47■□□□□ 0.87
RANBP3-205ENST00000586117 EIF4G3O43432 1585 aaKnown RBP20.38■□□□□ 0.85
RANBP3-205ENST00000586117 PRDM2Q13029 1718 aa20.38■□□□□ 0.85
RANBP3-205ENST00000586117 RSF1Q96T23 1441 aaPredicted RBP20.37■□□□□ 0.85
RANBP3-205ENST00000586117 CHD1O14646 1710 aa20.36■□□□□ 0.85
RANBP3-205ENST00000586117 TOP2AP11388 1531 aaKnown RBP20.35■□□□□ 0.85
RANBP3-205ENST00000586117 TOPBP1Q92547 1522 aa20.33■□□□□ 0.85
RANBP3-205ENST00000586117 FBLN2P98095 1184 aa20.32■□□□□ 0.84
RANBP3-205ENST00000586117 AQRO60306 1485 aaKnown RBP eCLIP20.27■□□□□ 0.842e-8■■■■■ 27.6
RANBP3-205ENST00000586117 ABCC8Q09428 1581 aa20.26■□□□□ 0.83
RANBP3-205ENST00000586117 DNMBPQ6XZF7 1577 aa20.19■□□□□ 0.82
RANBP3-205ENST00000586117 TARBP1Q13395 1621 aaKnown RBP20.18■□□□□ 0.82
RANBP3-205ENST00000586117 CCDC88BA6NC98 1476 aa20.12■□□□□ 0.81
RANBP3-205ENST00000586117 CLASP1Q7Z460 1538 aa20.12■□□□□ 0.81
RANBP3-205ENST00000586117 POLA1P09884 1462 aaPredicted RBP20.08■□□□□ 0.81
RANBP3-205ENST00000586117 SYNJ1O43426 1573 aa20.07■□□□□ 0.8
RANBP3-205ENST00000586117 CHMP7Q8WUX9 453 aaPredicted RBP20.05■□□□□ 0.8
RANBP3-205ENST00000586117 SNAPC4Q5SXM2 1469 aa20.05■□□□□ 0.8
RANBP3-205ENST00000586117 TDRD9Q8NDG6 1382 aaKnown RBP20.04■□□□□ 0.8
RANBP3-205ENST00000586117 RAD54L2Q9Y4B4 1467 aa20.02■□□□□ 0.8
RANBP3-205ENST00000586117 SOGA1O94964 1423 aa19.99■□□□□ 0.79
RANBP3-205ENST00000586117 GAPVD1Q14C86 1478 aa19.98■□□□□ 0.79
RANBP3-205ENST00000586117 MAGI1Q96QZ7 1491 aaPredicted RBP19.97■□□□□ 0.79
RANBP3-205ENST00000586117 WDR97A6NE52 1622 aa19.95■□□□□ 0.78
RANBP3-205ENST00000586117 SYNJ2O15056 1496 aa19.92■□□□□ 0.78
RANBP3-205ENST00000586117 GRIN2BQ13224 1484 aa19.9■□□□□ 0.78
RANBP3-205ENST00000586117 FGD5Q6ZNL6 1462 aa19.86■□□□□ 0.77
RANBP3-205ENST00000586117 ILDR1Q86SU0 546 aaPredicted RBP19.77■□□□□ 0.76
RANBP3-205ENST00000586117 PBRM1Q86U86 1689 aa19.75■□□□□ 0.75
RANBP3-205ENST00000586117 ERCC6L2Q5T890 1561 aa19.74■□□□□ 0.75
RANBP3-205ENST00000586117 KIF13AQ9H1H9 1805 aa19.71■□□□□ 0.75
RANBP3-205ENST00000586117 CUX1P39880 1505 aa19.71■□□□□ 0.75
RANBP3-205ENST00000586117 CEP170Q5SW79 1584 aa19.66■□□□□ 0.74
RANBP3-205ENST00000586117 GRIN2AQ12879 1464 aa19.63■□□□□ 0.73
RANBP3-205ENST00000586117 KDM4FA0A1W2PPD8 638 aa19.61■□□□□ 0.73
RANBP3-205ENST00000586117 ABCA5Q8WWZ7 1642 aa19.61■□□□□ 0.73
RANBP3-205ENST00000586117 ABCA10Q8WWZ4 1543 aa19.59■□□□□ 0.73
RANBP3-205ENST00000586117 NUP160Q12769 1436 aa19.59■□□□□ 0.73
RANBP3-205ENST00000586117 FAM69CQ0P6D2 419 aa19.58■□□□□ 0.72
RANBP3-205ENST00000586117 SHROOM2Q13796 1616 aa19.57■□□□□ 0.72
RANBP3-205ENST00000586117 ABCC10Q5T3U5 1492 aa19.54■□□□□ 0.72
RANBP3-205ENST00000586117 ADAMTS12P58397 1594 aa19.52■□□□□ 0.71
RANBP3-205ENST00000586117 KDM6BO15054 1643 aa19.5■□□□□ 0.71
RANBP3-205ENST00000586117 NPM1P06748 294 aaKnown RBP eCLIP19.49■□□□□ 0.71
RANBP3-205ENST00000586117 PRG4Q92954 1404 aaPredicted RBP19.47■□□□□ 0.71
RANBP3-205ENST00000586117 DIP2BQ9P265 1576 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms