RNA–Protein interactions for RNA: ENST00000584592.5

CDK5RAP3-235, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 372 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-235ENST00000584592 NISCHQ9Y2I1 1504 aa26.27■■□□□ 1.8
CDK5RAP3-235ENST00000584592 ABCC9O60706 1549 aa24.82■■□□□ 1.56
CDK5RAP3-235ENST00000584592 DNAJC5BQ9UF47 199 aa24.28■■□□□ 1.48
CDK5RAP3-235ENST00000584592 CCDC180Q9P1Z9 1646 aa23.93■■□□□ 1.42
CDK5RAP3-235ENST00000584592 RB1CC1Q8TDY2 1594 aa23.24■■□□□ 1.31
CDK5RAP3-235ENST00000584592 DNAJC5Q9H3Z4 198 aa23.1■■□□□ 1.29
CDK5RAP3-235ENST00000584592 PABPN1Q86U42 306 aaKnown RBP eCLIP22.9■■□□□ 1.26
CDK5RAP3-235ENST00000584592 NACADO15069 1562 aa22.87■■□□□ 1.25
CDK5RAP3-235ENST00000584592 UNC13AQ9UPW8 1703 aa22.69■■□□□ 1.22
CDK5RAP3-235ENST00000584592 BICRAQ9NZM4 1560 aa22.64■■□□□ 1.22
CDK5RAP3-235ENST00000584592 CECR2Q9BXF3 1484 aa22.52■■□□□ 1.2
CDK5RAP3-235ENST00000584592 CC2D2AQ9P2K1 1620 aa22.42■■□□□ 1.18
CDK5RAP3-235ENST00000584592 SHROOM4Q9ULL8 1493 aa22.32■■□□□ 1.16
CDK5RAP3-235ENST00000584592 MYO15BQ96JP2 1530 aa22.31■■□□□ 1.16
CDK5RAP3-235ENST00000584592 DCAF8L2P0C7V8 631 aa22.27■■□□□ 1.16
CDK5RAP3-235ENST00000584592 EIF4G1Q04637 1599 aaKnown RBP22.14■■□□□ 1.13
CDK5RAP3-235ENST00000584592 ZCCHC6Q5VYS8 1495 aaKnown RBP21.96■■□□□ 1.11
CDK5RAP3-235ENST00000584592 CUX2O14529 1486 aa21.94■■□□□ 1.1
CDK5RAP3-235ENST00000584592 DCAF1Q9Y4B6 1507 aa21.85■■□□□ 1.09
CDK5RAP3-235ENST00000584592 SCRIBQ14160 1630 aa21.6■■□□□ 1.05
CDK5RAP3-235ENST00000584592 ERCC6Q03468 1493 aa21.49■■□□□ 1.03
CDK5RAP3-235ENST00000584592 TRIM41Q8WV44 630 aa21.47■■□□□ 1.03
CDK5RAP3-235ENST00000584592 NCAPD3P42695 1498 aa21.15■□□□□ 0.98
CDK5RAP3-235ENST00000584592 THOC2Q8NI27 1593 aaKnown RBP21.1■□□□□ 0.97
CDK5RAP3-235ENST00000584592 NESP48681 1621 aa21.04■□□□□ 0.96
CDK5RAP3-235ENST00000584592 ATAD2BQ9ULI0 1458 aa20.89■□□□□ 0.94
CDK5RAP3-235ENST00000584592 HMGXB3Q12766 1538 aa20.88■□□□□ 0.93
CDK5RAP3-235ENST00000584592 LAMC3Q9Y6N6 1575 aa20.8■□□□□ 0.92
CDK5RAP3-235ENST00000584592 SMARCA2P51531 1590 aa20.78■□□□□ 0.92
CDK5RAP3-235ENST00000584592 KIF21AQ7Z4S6 1674 aa20.74■□□□□ 0.91
CDK5RAP3-235ENST00000584592 BAZ1AQ9NRL2 1556 aaPredicted RBP20.72■□□□□ 0.91
CDK5RAP3-235ENST00000584592 PDS5BQ9NTI5 1447 aa20.7■□□□□ 0.9
CDK5RAP3-235ENST00000584592 OSCARQ8IYS5 282 aa20.69■□□□□ 0.9
CDK5RAP3-235ENST00000584592 WDR62O43379 1518 aa20.59■□□□□ 0.89
CDK5RAP3-235ENST00000584592 BAZ1BQ9UIG0 1483 aaKnown RBP20.58■□□□□ 0.89
CDK5RAP3-235ENST00000584592 SMARCA4P51532 1647 aa20.58■□□□□ 0.89
CDK5RAP3-235ENST00000584592 MRC2Q9UBG0 1479 aa20.57■□□□□ 0.88
CDK5RAP3-235ENST00000584592 RIMBP3CA6NJZ7 1639 aa20.53■□□□□ 0.88
CDK5RAP3-235ENST00000584592 RIMBP3BA6NNM3 1639 aa20.53■□□□□ 0.88
CDK5RAP3-235ENST00000584592 RIMBP3Q9UFD9 1639 aa20.53■□□□□ 0.88
CDK5RAP3-235ENST00000584592 PEG3Q9GZU2 1588 aa20.49■□□□□ 0.87
CDK5RAP3-235ENST00000584592 AEBP2Q6ZN18 517 aaPredicted RBP20.46■□□□□ 0.87
CDK5RAP3-235ENST00000584592 CADPSQ9ULU8 1353 aa20.41■□□□□ 0.86
CDK5RAP3-235ENST00000584592 ARHGEF11O15085 1522 aa20.38■□□□□ 0.85
CDK5RAP3-235ENST00000584592 TRHP20396 242 aaPredicted RBP20.27■□□□□ 0.84
CDK5RAP3-235ENST00000584592 CEP164Q9UPV0 1460 aa20.25■□□□□ 0.83
CDK5RAP3-235ENST00000584592 MROH2BQ7Z745 1585 aa20.21■□□□□ 0.83
CDK5RAP3-235ENST00000584592 CYB5RLQ6IPT4 315 aa20.21■□□□□ 0.83
CDK5RAP3-235ENST00000584592 RSF1Q96T23 1441 aaPredicted RBP20.19■□□□□ 0.82
CDK5RAP3-235ENST00000584592 FANCD2Q9BXW9 1451 aa20.14■□□□□ 0.81
CDK5RAP3-235ENST00000584592 ARAP1Q96P48 1450 aa20.11■□□□□ 0.81
CDK5RAP3-235ENST00000584592 URB2Q14146 1524 aaKnown RBP20.07■□□□□ 0.8
CDK5RAP3-235ENST00000584592 CFTRP13569 1480 aa19.99■□□□□ 0.79
CDK5RAP3-235ENST00000584592 WIZO95785 1651 aa19.97■□□□□ 0.79
CDK5RAP3-235ENST00000584592 ZNF608Q9ULD9 1512 aaPredicted RBP19.96■□□□□ 0.79
CDK5RAP3-235ENST00000584592 IFT140Q96RY7 1462 aa19.92■□□□□ 0.78
CDK5RAP3-235ENST00000584592 SUPT5HO00267 1087 aaKnown RBP19.87■□□□□ 0.77
CDK5RAP3-235ENST00000584592 ILDR1Q86SU0 546 aaPredicted RBP19.83■□□□□ 0.77
CDK5RAP3-235ENST00000584592 CHD1O14646 1710 aa19.82■□□□□ 0.76
CDK5RAP3-235ENST00000584592 TOP2AP11388 1531 aaKnown RBP19.82■□□□□ 0.76
CDK5RAP3-235ENST00000584592 EIF4G3O43432 1585 aaKnown RBP19.8■□□□□ 0.76
CDK5RAP3-235ENST00000584592 CLASP1Q7Z460 1538 aa19.66■□□□□ 0.74
CDK5RAP3-235ENST00000584592 TOPBP1Q92547 1522 aa19.66■□□□□ 0.74
CDK5RAP3-235ENST00000584592 PRDM2Q13029 1718 aa19.65■□□□□ 0.74
CDK5RAP3-235ENST00000584592 AQRO60306 1485 aaKnown RBP eCLIP19.63■□□□□ 0.733e-7■■■■□ 19.4
CDK5RAP3-235ENST00000584592 CCDC88BA6NC98 1476 aa19.62■□□□□ 0.73
CDK5RAP3-235ENST00000584592 FBLN2P98095 1184 aa19.6■□□□□ 0.73
CDK5RAP3-235ENST00000584592 TARBP1Q13395 1621 aaKnown RBP19.59■□□□□ 0.73
CDK5RAP3-235ENST00000584592 ABCC8Q09428 1581 aa19.58■□□□□ 0.73
CDK5RAP3-235ENST00000584592 DNMBPQ6XZF7 1577 aa19.5■□□□□ 0.71
CDK5RAP3-235ENST00000584592 SYNJ1O43426 1573 aa19.49■□□□□ 0.71
CDK5RAP3-235ENST00000584592 GAPVD1Q14C86 1478 aa19.48■□□□□ 0.71
CDK5RAP3-235ENST00000584592 POLA1P09884 1462 aaPredicted RBP19.4■□□□□ 0.7
CDK5RAP3-235ENST00000584592 SNAPC4Q5SXM2 1469 aa19.4■□□□□ 0.7
CDK5RAP3-235ENST00000584592 KDM4FA0A1W2PPD8 638 aa19.39■□□□□ 0.69
CDK5RAP3-235ENST00000584592 WDR97A6NE52 1622 aa19.37■□□□□ 0.69
CDK5RAP3-235ENST00000584592 MAGI1Q96QZ7 1491 aaPredicted RBP19.37■□□□□ 0.69
CDK5RAP3-235ENST00000584592 CHMP7Q8WUX9 453 aaPredicted RBP19.36■□□□□ 0.69
CDK5RAP3-235ENST00000584592 KIF13AQ9H1H9 1805 aa19.34■□□□□ 0.69
CDK5RAP3-235ENST00000584592 TDRD9Q8NDG6 1382 aaKnown RBP19.32■□□□□ 0.68
CDK5RAP3-235ENST00000584592 SYNJ2O15056 1496 aa19.31■□□□□ 0.68
CDK5RAP3-235ENST00000584592 RAD54L2Q9Y4B4 1467 aa19.29■□□□□ 0.68
CDK5RAP3-235ENST00000584592 SOGA1O94964 1423 aa19.25■□□□□ 0.67
CDK5RAP3-235ENST00000584592 GRIN2BQ13224 1484 aa19.23■□□□□ 0.67
CDK5RAP3-235ENST00000584592 ERCC6L2Q5T890 1561 aa19.2■□□□□ 0.66
CDK5RAP3-235ENST00000584592 ABCC10Q5T3U5 1492 aa19.13■□□□□ 0.65
CDK5RAP3-235ENST00000584592 CEP170Q5SW79 1584 aa19.1■□□□□ 0.65
CDK5RAP3-235ENST00000584592 FGD5Q6ZNL6 1462 aa19.09■□□□□ 0.65
CDK5RAP3-235ENST00000584592 KDM6BO15054 1643 aa19.09■□□□□ 0.65
CDK5RAP3-235ENST00000584592 FAM69CQ0P6D2 419 aa19.06■□□□□ 0.64
CDK5RAP3-235ENST00000584592 SHROOM2Q13796 1616 aa19.05■□□□□ 0.64
CDK5RAP3-235ENST00000584592 HECW2Q9P2P5 1572 aa19.05■□□□□ 0.64
CDK5RAP3-235ENST00000584592 PBRM1Q86U86 1689 aa19.05■□□□□ 0.64
CDK5RAP3-235ENST00000584592 FBXO41Q8TF61 875 aa19.04■□□□□ 0.64
CDK5RAP3-235ENST00000584592 DIP2BQ9P265 1576 aa19.02■□□□□ 0.64
CDK5RAP3-235ENST00000584592 NUP160Q12769 1436 aa19.01■□□□□ 0.63
CDK5RAP3-235ENST00000584592 MAPKBP1O60336 1514 aa19.01■□□□□ 0.63
CDK5RAP3-235ENST00000584592 GRIN2AQ12879 1464 aa18.99■□□□□ 0.63
CDK5RAP3-235ENST00000584592 WRNQ14191 1432 aaPredicted RBP eCLIP18.98■□□□□ 0.63
CDK5RAP3-235ENST00000584592 ADGRL1O94910 1474 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms