RNA–Protein interactions for RNA: ENST00000582962.1

LINC01906-201, Transcript of long intergenic non-protein coding RNA 1906, humanhuman

TSL 4 BASIC

Gene LINC01906, Length 499 nt, Biotype lincRNA.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01906-201ENST00000582962 NISCHQ9Y2I1 1504 aa15.88■□□□□ 0.13
LINC01906-201ENST00000582962 ABCC9O60706 1549 aa14.59□□□□□ -0.07
LINC01906-201ENST00000582962 CCDC180Q9P1Z9 1646 aa14.51□□□□□ -0.09
LINC01906-201ENST00000582962 AEBP2Q6ZN18 517 aaPredicted RBP14.38□□□□□ -0.11
LINC01906-201ENST00000582962 RB1CC1Q8TDY2 1594 aa13.87□□□□□ -0.19
LINC01906-201ENST00000582962 DNAJC5BQ9UF47 199 aa13.8□□□□□ -0.2
LINC01906-201ENST00000582962 NACADO15069 1562 aa13.71□□□□□ -0.22
LINC01906-201ENST00000582962 UNC13AQ9UPW8 1703 aa13.61□□□□□ -0.23
LINC01906-201ENST00000582962 MYO15BQ96JP2 1530 aa13.45□□□□□ -0.26
LINC01906-201ENST00000582962 BICRAQ9NZM4 1560 aa13.45□□□□□ -0.26
LINC01906-201ENST00000582962 PABPN1Q86U42 306 aaKnown RBP eCLIP13.42□□□□□ -0.26
LINC01906-201ENST00000582962 SHROOM4Q9ULL8 1493 aa13.34□□□□□ -0.27
LINC01906-201ENST00000582962 CHIC1Q5VXU3 224 aa13.31□□□□□ -0.28
LINC01906-201ENST00000582962 DCAF8L2P0C7V8 631 aa13.3□□□□□ -0.28
LINC01906-201ENST00000582962 CC2D2AQ9P2K1 1620 aa13.24□□□□□ -0.29
LINC01906-201ENST00000582962 CECR2Q9BXF3 1484 aa13.19□□□□□ -0.3
LINC01906-201ENST00000582962 DCAF1Q9Y4B6 1507 aa13.17□□□□□ -0.3
LINC01906-201ENST00000582962 EIF4G1Q04637 1599 aaKnown RBP13.15□□□□□ -0.3
LINC01906-201ENST00000582962 ZCCHC6Q5VYS8 1495 aaKnown RBP13.15□□□□□ -0.3
LINC01906-201ENST00000582962 SCRIBQ14160 1630 aa13.1□□□□□ -0.31
LINC01906-201ENST00000582962 DNAJC5Q9H3Z4 198 aa12.93□□□□□ -0.34
LINC01906-201ENST00000582962 CUX2O14529 1486 aa12.78□□□□□ -0.36
LINC01906-201ENST00000582962 ERCC6Q03468 1493 aa12.65□□□□□ -0.38
LINC01906-201ENST00000582962 NCAPD3P42695 1498 aa12.59□□□□□ -0.39
LINC01906-201ENST00000582962 HMGXB3Q12766 1538 aa12.57□□□□□ -0.4
LINC01906-201ENST00000582962 SMARCA2P51531 1590 aa12.53□□□□□ -0.4
LINC01906-201ENST00000582962 ATAD2BQ9ULI0 1458 aa12.51□□□□□ -0.41
LINC01906-201ENST00000582962 THOC2Q8NI27 1593 aaKnown RBP12.51□□□□□ -0.41
LINC01906-201ENST00000582962 SMARCA4P51532 1647 aa12.49□□□□□ -0.41
LINC01906-201ENST00000582962 NESP48681 1621 aa12.44□□□□□ -0.42
LINC01906-201ENST00000582962 LAMC3Q9Y6N6 1575 aa12.43□□□□□ -0.42
LINC01906-201ENST00000582962 BAZ1BQ9UIG0 1483 aaKnown RBP12.4□□□□□ -0.42
LINC01906-201ENST00000582962 PEG3Q9GZU2 1588 aa12.4□□□□□ -0.42
LINC01906-201ENST00000582962 KIF21AQ7Z4S6 1674 aa12.39□□□□□ -0.43
LINC01906-201ENST00000582962 BAZ1AQ9NRL2 1556 aaPredicted RBP12.39□□□□□ -0.43
LINC01906-201ENST00000582962 PDS5BQ9NTI5 1447 aa12.29□□□□□ -0.44
LINC01906-201ENST00000582962 SENP3Q9H4L4 574 aaPredicted RBP12.29□□□□□ -0.44
LINC01906-201ENST00000582962 WDR62O43379 1518 aa12.25□□□□□ -0.45
LINC01906-201ENST00000582962 MRC2Q9UBG0 1479 aa12.23□□□□□ -0.45
LINC01906-201ENST00000582962 TRIM41Q8WV44 630 aa12.21□□□□□ -0.45
LINC01906-201ENST00000582962 MROH2BQ7Z745 1585 aa12.21□□□□□ -0.46
LINC01906-201ENST00000582962 CADPSQ9ULU8 1353 aa12.16□□□□□ -0.46
LINC01906-201ENST00000582962 CEP164Q9UPV0 1460 aa12.14□□□□□ -0.47
LINC01906-201ENST00000582962 WIZO95785 1651 aa12.07□□□□□ -0.48
LINC01906-201ENST00000582962 FANCD2Q9BXW9 1451 aa12.07□□□□□ -0.48
LINC01906-201ENST00000582962 PHF23Q9BUL5 403 aaPredicted RBP12.05□□□□□ -0.48
LINC01906-201ENST00000582962 PRDM2Q13029 1718 aa12.04□□□□□ -0.48
LINC01906-201ENST00000582962 POTEDQ86YR6 584 aa12.03□□□□□ -0.48
LINC01906-201ENST00000582962 CFTRP13569 1480 aa12.01□□□□□ -0.49
LINC01906-201ENST00000582962 RIMBP3CA6NJZ7 1639 aa12□□□□□ -0.49
LINC01906-201ENST00000582962 RIMBP3BA6NNM3 1639 aa12□□□□□ -0.49
LINC01906-201ENST00000582962 RIMBP3Q9UFD9 1639 aa12□□□□□ -0.49
LINC01906-201ENST00000582962 OSCARQ8IYS5 282 aa11.99□□□□□ -0.49
LINC01906-201ENST00000582962 URB2Q14146 1524 aaKnown RBP11.98□□□□□ -0.49
LINC01906-201ENST00000582962 TOP2AP11388 1531 aaKnown RBP11.95□□□□□ -0.5
LINC01906-201ENST00000582962 ARHGEF11O15085 1522 aa11.92□□□□□ -0.5
LINC01906-201ENST00000582962 IFT140Q96RY7 1462 aa11.89□□□□□ -0.51
LINC01906-201ENST00000582962 EIF4G3O43432 1585 aaKnown RBP11.88□□□□□ -0.51
LINC01906-201ENST00000582962 CHD1O14646 1710 aa11.85□□□□□ -0.51
LINC01906-201ENST00000582962 ZNF608Q9ULD9 1512 aaPredicted RBP11.85□□□□□ -0.51
LINC01906-201ENST00000582962 RSF1Q96T23 1441 aaPredicted RBP11.82□□□□□ -0.52
LINC01906-201ENST00000582962 TOPBP1Q92547 1522 aa11.81□□□□□ -0.52
LINC01906-201ENST00000582962 ABCC8Q09428 1581 aa11.79□□□□□ -0.52
LINC01906-201ENST00000582962 DNMBPQ6XZF7 1577 aa11.79□□□□□ -0.52
LINC01906-201ENST00000582962 ARAP1Q96P48 1450 aa11.77□□□□□ -0.52
LINC01906-201ENST00000582962 TARBP1Q13395 1621 aaKnown RBP11.77□□□□□ -0.53
LINC01906-201ENST00000582962 WDR97A6NE52 1622 aa11.71□□□□□ -0.53
LINC01906-201ENST00000582962 CCDC88BA6NC98 1476 aa11.71□□□□□ -0.53
LINC01906-201ENST00000582962 CYB5RLQ6IPT4 315 aa11.7□□□□□ -0.54
LINC01906-201ENST00000582962 CLASP1Q7Z460 1538 aa11.68□□□□□ -0.54
LINC01906-201ENST00000582962 AQRO60306 1485 aaKnown RBP eCLIP11.67□□□□□ -0.54
LINC01906-201ENST00000582962 POLA1P09884 1462 aaPredicted RBP11.67□□□□□ -0.54
LINC01906-201ENST00000582962 TRHP20396 242 aaPredicted RBP11.66□□□□□ -0.54
LINC01906-201ENST00000582962 SYNJ1O43426 1573 aa11.65□□□□□ -0.54
LINC01906-201ENST00000582962 SNAPC4Q5SXM2 1469 aa11.62□□□□□ -0.55
LINC01906-201ENST00000582962 MAGI1Q96QZ7 1491 aaPredicted RBP11.61□□□□□ -0.55
LINC01906-201ENST00000582962 FBLN2P98095 1184 aa11.58□□□□□ -0.56
LINC01906-201ENST00000582962 FOXD1Q16676 465 aa11.58□□□□□ -0.56
LINC01906-201ENST00000582962 PBRM1Q86U86 1689 aa11.58□□□□□ -0.56
LINC01906-201ENST00000582962 RAD54L2Q9Y4B4 1467 aa11.57□□□□□ -0.56
LINC01906-201ENST00000582962 SYNJ2O15056 1496 aa11.56□□□□□ -0.56
LINC01906-201ENST00000582962 FGD5Q6ZNL6 1462 aa11.56□□□□□ -0.56
LINC01906-201ENST00000582962 SOGA1O94964 1423 aa11.55□□□□□ -0.56
LINC01906-201ENST00000582962 GRIN2BQ13224 1484 aa11.54□□□□□ -0.56
LINC01906-201ENST00000582962 TDRD9Q8NDG6 1382 aaKnown RBP11.53□□□□□ -0.56
LINC01906-201ENST00000582962 GAPVD1Q14C86 1478 aa11.51□□□□□ -0.57
LINC01906-201ENST00000582962 CUX1P39880 1505 aa11.5□□□□□ -0.57
LINC01906-201ENST00000582962 ABCA5Q8WWZ7 1642 aa11.49□□□□□ -0.57
LINC01906-201ENST00000582962 CHMP7Q8WUX9 453 aaPredicted RBP11.48□□□□□ -0.57
LINC01906-201ENST00000582962 ADAMTS12P58397 1594 aa11.43□□□□□ -0.58
LINC01906-201ENST00000582962 KIF13AQ9H1H9 1805 aa11.43□□□□□ -0.58
LINC01906-201ENST00000582962 ABCA10Q8WWZ4 1543 aa11.43□□□□□ -0.58
LINC01906-201ENST00000582962 SHROOM2Q13796 1616 aa11.42□□□□□ -0.58
LINC01906-201ENST00000582962 GRIN2AQ12879 1464 aa11.41□□□□□ -0.58
LINC01906-201ENST00000582962 CEP170Q5SW79 1584 aa11.41□□□□□ -0.58
LINC01906-201ENST00000582962 ERCC6L2Q5T890 1561 aa11.41□□□□□ -0.58
LINC01906-201ENST00000582962 NUP160Q12769 1436 aa11.37□□□□□ -0.59
LINC01906-201ENST00000582962 BIVM-ERCC5R4GMW8 1640 aa11.33□□□□□ -0.6
LINC01906-201ENST00000582962 ERICH3Q5RHP9 1530 aa11.3□□□□□ -0.6
LINC01906-201ENST00000582962 FHAD1B1AJZ9 1412 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 166.1 ms