RNA–Protein interactions for RNA: ENST00000580039.6

STRADA-214, Transcript of STE20-related kinase adaptor alpha, humanhuman

TSL 5

Gene STRADA, Length 998 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRADA-214ENST00000580039 AEBP2Q6ZN18 517 aaPredicted RBP14.98□□□□□ -0.01
STRADA-214ENST00000580039 CHIC1Q5VXU3 224 aa14.47□□□□□ -0.09
STRADA-214ENST00000580039 NISCHQ9Y2I1 1504 aa14.24□□□□□ -0.13
STRADA-214ENST00000580039 ABCC9O60706 1549 aa12.93□□□□□ -0.34
STRADA-214ENST00000580039 CCDC180Q9P1Z9 1646 aa12.92□□□□□ -0.34
STRADA-214ENST00000580039 SENP3Q9H4L4 574 aaPredicted RBP12.85□□□□□ -0.35
STRADA-214ENST00000580039 PHF23Q9BUL5 403 aaPredicted RBP12.66□□□□□ -0.38
STRADA-214ENST00000580039 RB1CC1Q8TDY2 1594 aa12.31□□□□□ -0.44
STRADA-214ENST00000580039 NACADO15069 1562 aa12.19□□□□□ -0.46
STRADA-214ENST00000580039 DNAJC5BQ9UF47 199 aa12.17□□□□□ -0.46
STRADA-214ENST00000580039 UNC13AQ9UPW8 1703 aa12.14□□□□□ -0.47
STRADA-214ENST00000580039 DCAF8L2P0C7V8 631 aa12.01□□□□□ -0.49
STRADA-214ENST00000580039 MYO15BQ96JP2 1530 aa11.97□□□□□ -0.49
STRADA-214ENST00000580039 PABPN1Q86U42 306 aaKnown RBP eCLIP11.97□□□□□ -0.49
STRADA-214ENST00000580039 BICRAQ9NZM4 1560 aa11.94□□□□□ -0.5
STRADA-214ENST00000580039 FOXD1Q16676 465 aa11.89□□□□□ -0.51
STRADA-214ENST00000580039 SHROOM4Q9ULL8 1493 aa11.78□□□□□ -0.52
STRADA-214ENST00000580039 DCAF1Q9Y4B6 1507 aa11.77□□□□□ -0.52
STRADA-214ENST00000580039 ZCCHC6Q5VYS8 1495 aaKnown RBP11.76□□□□□ -0.53
STRADA-214ENST00000580039 CC2D2AQ9P2K1 1620 aa11.72□□□□□ -0.53
STRADA-214ENST00000580039 SCRIBQ14160 1630 aa11.7□□□□□ -0.54
STRADA-214ENST00000580039 PLPPR3Q6T4P5 718 aa11.67□□□□□ -0.54
STRADA-214ENST00000580039 CECR2Q9BXF3 1484 aa11.66□□□□□ -0.54
STRADA-214ENST00000580039 EIF4G1Q04637 1599 aaKnown RBP11.66□□□□□ -0.54
STRADA-214ENST00000580039 DNAJC5Q9H3Z4 198 aa11.41□□□□□ -0.58
STRADA-214ENST00000580039 CUX2O14529 1486 aa11.22□□□□□ -0.61
STRADA-214ENST00000580039 NCAPD3P42695 1498 aa11.21□□□□□ -0.61
STRADA-214ENST00000580039 PPP6R1Q9UPN7 881 aa11.21□□□□□ -0.61
STRADA-214ENST00000580039 ADRA2BP18089 450 aa11.2□□□□□ -0.62
STRADA-214ENST00000580039 PIAS4Q8N2W9 510 aaPredicted RBP11.18□□□□□ -0.62
STRADA-214ENST00000580039 ERCC6Q03468 1493 aa11.18□□□□□ -0.62
STRADA-214ENST00000580039 SMARCA4P51532 1647 aa11.17□□□□□ -0.62
STRADA-214ENST00000580039 SMARCA2P51531 1590 aa11.16□□□□□ -0.62
STRADA-214ENST00000580039 HMGXB3Q12766 1538 aa11.15□□□□□ -0.62
STRADA-214ENST00000580039 ATAD2BQ9ULI0 1458 aa11.15□□□□□ -0.62
STRADA-214ENST00000580039 MSH5O43196 834 aa11.14□□□□□ -0.63
STRADA-214ENST00000580039 BAZ1AQ9NRL2 1556 aaPredicted RBP11.08□□□□□ -0.64
STRADA-214ENST00000580039 NESP48681 1621 aa11.07□□□□□ -0.64
STRADA-214ENST00000580039 PEG3Q9GZU2 1588 aa11.06□□□□□ -0.64
STRADA-214ENST00000580039 BAZ1BQ9UIG0 1483 aaKnown RBP11.06□□□□□ -0.64
STRADA-214ENST00000580039 THOC2Q8NI27 1593 aaKnown RBP11.03□□□□□ -0.64
STRADA-214ENST00000580039 LAMC3Q9Y6N6 1575 aa11.03□□□□□ -0.64
STRADA-214ENST00000580039 KIF21AQ7Z4S6 1674 aa11.03□□□□□ -0.64
STRADA-214ENST00000580039 MROH2BQ7Z745 1585 aa10.95□□□□□ -0.66
STRADA-214ENST00000580039 PDS5BQ9NTI5 1447 aa10.92□□□□□ -0.66
STRADA-214ENST00000580039 WIZO95785 1651 aa10.87□□□□□ -0.67
STRADA-214ENST00000580039 CADPSQ9ULU8 1353 aa10.85□□□□□ -0.67
STRADA-214ENST00000580039 MRC2Q9UBG0 1479 aa10.84□□□□□ -0.67
STRADA-214ENST00000580039 WDR62O43379 1518 aa10.84□□□□□ -0.67
STRADA-214ENST00000580039 CEP164Q9UPV0 1460 aa10.78□□□□□ -0.68
STRADA-214ENST00000580039 PRDM2Q13029 1718 aa10.78□□□□□ -0.68
STRADA-214ENST00000580039 FANCD2Q9BXW9 1451 aa10.74□□□□□ -0.69
STRADA-214ENST00000580039 TRIM41Q8WV44 630 aa10.74□□□□□ -0.69
STRADA-214ENST00000580039 CFTRP13569 1480 aa10.71□□□□□ -0.69
STRADA-214ENST00000580039 TOP2AP11388 1531 aaKnown RBP10.7□□□□□ -0.7
STRADA-214ENST00000580039 RSF1Q96T23 1441 aaPredicted RBP10.67□□□□□ -0.7
STRADA-214ENST00000580039 URB2Q14146 1524 aaKnown RBP10.66□□□□□ -0.7
STRADA-214ENST00000580039 OSCARQ8IYS5 282 aa10.65□□□□□ -0.7
STRADA-214ENST00000580039 RIMBP3CA6NJZ7 1639 aa10.58□□□□□ -0.72
STRADA-214ENST00000580039 RIMBP3BA6NNM3 1639 aa10.58□□□□□ -0.72
STRADA-214ENST00000580039 RIMBP3Q9UFD9 1639 aa10.58□□□□□ -0.72
STRADA-214ENST00000580039 IFT140Q96RY7 1462 aa10.56□□□□□ -0.72
STRADA-214ENST00000580039 CCDC88BA6NC98 1476 aa10.55□□□□□ -0.72
STRADA-214ENST00000580039 CHD1O14646 1710 aa10.54□□□□□ -0.72
STRADA-214ENST00000580039 TOPBP1Q92547 1522 aa10.53□□□□□ -0.72
STRADA-214ENST00000580039 ZNF608Q9ULD9 1512 aaPredicted RBP10.53□□□□□ -0.72
STRADA-214ENST00000580039 EIF4G3O43432 1585 aaKnown RBP10.53□□□□□ -0.72
STRADA-214ENST00000580039 ABCC8Q09428 1581 aa10.53□□□□□ -0.72
STRADA-214ENST00000580039 DNMBPQ6XZF7 1577 aa10.52□□□□□ -0.73
STRADA-214ENST00000580039 ARHGEF11O15085 1522 aa10.51□□□□□ -0.73
STRADA-214ENST00000580039 POTEDQ86YR6 584 aa10.5□□□□□ -0.73
STRADA-214ENST00000580039 TARBP1Q13395 1621 aaKnown RBP10.49□□□□□ -0.73
STRADA-214ENST00000580039 AQRO60306 1485 aaKnown RBP eCLIP10.42□□□□□ -0.744e-7■■■■■ 28.2
STRADA-214ENST00000580039 POLA1P09884 1462 aaPredicted RBP10.42□□□□□ -0.74
STRADA-214ENST00000580039 WDR97A6NE52 1622 aa10.4□□□□□ -0.74
STRADA-214ENST00000580039 CYB5RLQ6IPT4 315 aa10.39□□□□□ -0.75
STRADA-214ENST00000580039 SCAF1Q9H7N4 1312 aaKnown RBP10.37□□□□□ -0.75
STRADA-214ENST00000580039 ARAP1Q96P48 1450 aa10.37□□□□□ -0.75
STRADA-214ENST00000580039 FBLN2P98095 1184 aa10.36□□□□□ -0.75
STRADA-214ENST00000580039 RAD54L2Q9Y4B4 1467 aa10.36□□□□□ -0.75
STRADA-214ENST00000580039 PBRM1Q86U86 1689 aa10.34□□□□□ -0.75
STRADA-214ENST00000580039 SOGA1O94964 1423 aa10.34□□□□□ -0.75
STRADA-214ENST00000580039 FGD5Q6ZNL6 1462 aa10.34□□□□□ -0.75
STRADA-214ENST00000580039 SYNJ1O43426 1573 aa10.34□□□□□ -0.75
STRADA-214ENST00000580039 CLASP1Q7Z460 1538 aa10.33□□□□□ -0.76
STRADA-214ENST00000580039 SNAPC4Q5SXM2 1469 aa10.32□□□□□ -0.76
STRADA-214ENST00000580039 TDRD9Q8NDG6 1382 aaKnown RBP10.32□□□□□ -0.76
STRADA-214ENST00000580039 TRHP20396 242 aaPredicted RBP10.32□□□□□ -0.76
STRADA-214ENST00000580039 MAGI1Q96QZ7 1491 aaPredicted RBP10.31□□□□□ -0.76
STRADA-214ENST00000580039 CUX1P39880 1505 aa10.3□□□□□ -0.76
STRADA-214ENST00000580039 GRIN2BQ13224 1484 aa10.29□□□□□ -0.76
STRADA-214ENST00000580039 CHMP7Q8WUX9 453 aaPredicted RBP10.28□□□□□ -0.76
STRADA-214ENST00000580039 SYNJ2O15056 1496 aa10.28□□□□□ -0.76
STRADA-214ENST00000580039 ABCA5Q8WWZ7 1642 aa10.25□□□□□ -0.77
STRADA-214ENST00000580039 GAPVD1Q14C86 1478 aa10.23□□□□□ -0.77
STRADA-214ENST00000580039 PPP4R3CPQ6ZMV5 832 aa10.22□□□□□ -0.77
STRADA-214ENST00000580039 MAPK8IP2Q13387 824 aaPredicted RBP10.21□□□□□ -0.77
STRADA-214ENST00000580039 ABCA10Q8WWZ4 1543 aa10.21□□□□□ -0.78
STRADA-214ENST00000580039 DMRT2Q9Y5R5 561 aa10.19□□□□□ -0.78
STRADA-214ENST00000580039 BIVM-ERCC5R4GMW8 1640 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms