RNA–Protein interactions for RNA: ENST00000579028.1

BRIP1-204, Transcript of BRCA1 interacting protein C-terminal helicase 1, humanhuman

TSL 5

Gene BRIP1, Length 790 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIP1-204ENST00000579028 NISCHQ9Y2I1 1504 aa22.39■■□□□ 1.17
BRIP1-204ENST00000579028 AEBP2Q6ZN18 517 aaPredicted RBP20.76■□□□□ 0.91
BRIP1-204ENST00000579028 ABCC9O60706 1549 aa20.53■□□□□ 0.88
BRIP1-204ENST00000579028 CCDC180Q9P1Z9 1646 aa20.26■□□□□ 0.83
BRIP1-204ENST00000579028 CHIC1Q5VXU3 224 aa19.72■□□□□ 0.75
BRIP1-204ENST00000579028 DNAJC5BQ9UF47 199 aa19.56■□□□□ 0.72
BRIP1-204ENST00000579028 RB1CC1Q8TDY2 1594 aa19.42■□□□□ 0.7
BRIP1-204ENST00000579028 NACADO15069 1562 aa19.23■□□□□ 0.67
BRIP1-204ENST00000579028 PABPN1Q86U42 306 aaKnown RBP eCLIP19.03■□□□□ 0.64
BRIP1-204ENST00000579028 UNC13AQ9UPW8 1703 aa18.99■□□□□ 0.63
BRIP1-204ENST00000579028 DCAF8L2P0C7V8 631 aa18.94■□□□□ 0.62
BRIP1-204ENST00000579028 MYO15BQ96JP2 1530 aa18.88■□□□□ 0.61
BRIP1-204ENST00000579028 BICRAQ9NZM4 1560 aa18.88■□□□□ 0.61
BRIP1-204ENST00000579028 SHROOM4Q9ULL8 1493 aa18.63■□□□□ 0.57
BRIP1-204ENST00000579028 CC2D2AQ9P2K1 1620 aa18.55■□□□□ 0.56
BRIP1-204ENST00000579028 CECR2Q9BXF3 1484 aa18.53■□□□□ 0.56
BRIP1-204ENST00000579028 DCAF1Q9Y4B6 1507 aa18.5■□□□□ 0.55
BRIP1-204ENST00000579028 ZCCHC6Q5VYS8 1495 aaKnown RBP18.49■□□□□ 0.55
BRIP1-204ENST00000579028 EIF4G1Q04637 1599 aaKnown RBP18.43■□□□□ 0.54
BRIP1-204ENST00000579028 SCRIBQ14160 1630 aa18.38■□□□□ 0.53
BRIP1-204ENST00000579028 DNAJC5Q9H3Z4 198 aa18.21■□□□□ 0.51
BRIP1-204ENST00000579028 CUX2O14529 1486 aa17.87■□□□□ 0.45
BRIP1-204ENST00000579028 NCAPD3P42695 1498 aa17.75■□□□□ 0.43
BRIP1-204ENST00000579028 ERCC6Q03468 1493 aa17.74■□□□□ 0.43
BRIP1-204ENST00000579028 ATAD2BQ9ULI0 1458 aa17.63■□□□□ 0.41
BRIP1-204ENST00000579028 SENP3Q9H4L4 574 aaPredicted RBP17.61■□□□□ 0.41
BRIP1-204ENST00000579028 HMGXB3Q12766 1538 aa17.59■□□□□ 0.41
BRIP1-204ENST00000579028 SMARCA2P51531 1590 aa17.57■□□□□ 0.4
BRIP1-204ENST00000579028 NESP48681 1621 aa17.54■□□□□ 0.4
BRIP1-204ENST00000579028 SMARCA4P51532 1647 aa17.54■□□□□ 0.4
BRIP1-204ENST00000579028 THOC2Q8NI27 1593 aaKnown RBP17.47■□□□□ 0.39
BRIP1-204ENST00000579028 BAZ1BQ9UIG0 1483 aaKnown RBP17.44■□□□□ 0.38
BRIP1-204ENST00000579028 PHF23Q9BUL5 403 aaPredicted RBP17.41■□□□□ 0.38
BRIP1-204ENST00000579028 BAZ1AQ9NRL2 1556 aaPredicted RBP17.4■□□□□ 0.38
BRIP1-204ENST00000579028 LAMC3Q9Y6N6 1575 aa17.4■□□□□ 0.38
BRIP1-204ENST00000579028 PEG3Q9GZU2 1588 aa17.4■□□□□ 0.38
BRIP1-204ENST00000579028 KIF21AQ7Z4S6 1674 aa17.32■□□□□ 0.36
BRIP1-204ENST00000579028 PDS5BQ9NTI5 1447 aa17.29■□□□□ 0.36
BRIP1-204ENST00000579028 MROH2BQ7Z745 1585 aa17.23■□□□□ 0.35
BRIP1-204ENST00000579028 TRIM41Q8WV44 630 aa17.22■□□□□ 0.35
BRIP1-204ENST00000579028 CADPSQ9ULU8 1353 aa17.17■□□□□ 0.34
BRIP1-204ENST00000579028 MRC2Q9UBG0 1479 aa17.17■□□□□ 0.34
BRIP1-204ENST00000579028 WDR62O43379 1518 aa17.16■□□□□ 0.34
BRIP1-204ENST00000579028 CEP164Q9UPV0 1460 aa17.03■□□□□ 0.32
BRIP1-204ENST00000579028 WIZO95785 1651 aa17.01■□□□□ 0.31
BRIP1-204ENST00000579028 FANCD2Q9BXW9 1451 aa16.98■□□□□ 0.31
BRIP1-204ENST00000579028 OSCARQ8IYS5 282 aa16.96■□□□□ 0.31
BRIP1-204ENST00000579028 CFTRP13569 1480 aa16.93■□□□□ 0.3
BRIP1-204ENST00000579028 URB2Q14146 1524 aaKnown RBP16.86■□□□□ 0.29
BRIP1-204ENST00000579028 RIMBP3CA6NJZ7 1639 aa16.79■□□□□ 0.28
BRIP1-204ENST00000579028 RIMBP3BA6NNM3 1639 aa16.79■□□□□ 0.28
BRIP1-204ENST00000579028 RIMBP3Q9UFD9 1639 aa16.79■□□□□ 0.28
BRIP1-204ENST00000579028 TOP2AP11388 1531 aaKnown RBP16.79■□□□□ 0.28
BRIP1-204ENST00000579028 RSF1Q96T23 1441 aaPredicted RBP16.76■□□□□ 0.27
BRIP1-204ENST00000579028 PRDM2Q13029 1718 aa16.73■□□□□ 0.27
BRIP1-204ENST00000579028 IFT140Q96RY7 1462 aa16.71■□□□□ 0.27
BRIP1-204ENST00000579028 ARHGEF11O15085 1522 aa16.7■□□□□ 0.26
BRIP1-204ENST00000579028 ZNF608Q9ULD9 1512 aaPredicted RBP16.7■□□□□ 0.26
BRIP1-204ENST00000579028 TOPBP1Q92547 1522 aa16.63■□□□□ 0.25
BRIP1-204ENST00000579028 EIF4G3O43432 1585 aaKnown RBP16.6■□□□□ 0.25
BRIP1-204ENST00000579028 CCDC88BA6NC98 1476 aa16.58■□□□□ 0.24
BRIP1-204ENST00000579028 ABCC8Q09428 1581 aa16.58■□□□□ 0.24
BRIP1-204ENST00000579028 CYB5RLQ6IPT4 315 aa16.56■□□□□ 0.24
BRIP1-204ENST00000579028 DNMBPQ6XZF7 1577 aa16.54■□□□□ 0.24
BRIP1-204ENST00000579028 CHD1O14646 1710 aa16.53■□□□□ 0.24
BRIP1-204ENST00000579028 ARAP1Q96P48 1450 aa16.53■□□□□ 0.24
BRIP1-204ENST00000579028 TARBP1Q13395 1621 aaKnown RBP16.52■□□□□ 0.23
BRIP1-204ENST00000579028 AQRO60306 1485 aaKnown RBP eCLIP16.49■□□□□ 0.23
BRIP1-204ENST00000579028 TRHP20396 242 aaPredicted RBP16.47■□□□□ 0.23
BRIP1-204ENST00000579028 FOXD1Q16676 465 aa16.46■□□□□ 0.23
BRIP1-204ENST00000579028 POLA1P09884 1462 aaPredicted RBP16.43■□□□□ 0.22
BRIP1-204ENST00000579028 FBLN2P98095 1184 aa16.41■□□□□ 0.22
BRIP1-204ENST00000579028 RAD54L2Q9Y4B4 1467 aa16.36■□□□□ 0.21
BRIP1-204ENST00000579028 CLASP1Q7Z460 1538 aa16.36■□□□□ 0.21
BRIP1-204ENST00000579028 WDR97A6NE52 1622 aa16.34■□□□□ 0.21
BRIP1-204ENST00000579028 TDRD9Q8NDG6 1382 aaKnown RBP16.34■□□□□ 0.21
BRIP1-204ENST00000579028 SOGA1O94964 1423 aa16.34■□□□□ 0.21
BRIP1-204ENST00000579028 SNAPC4Q5SXM2 1469 aa16.33■□□□□ 0.2
BRIP1-204ENST00000579028 SYNJ1O43426 1573 aa16.3■□□□□ 0.2
BRIP1-204ENST00000579028 MAGI1Q96QZ7 1491 aaPredicted RBP16.29■□□□□ 0.2
BRIP1-204ENST00000579028 FGD5Q6ZNL6 1462 aa16.28■□□□□ 0.2
BRIP1-204ENST00000579028 CHMP7Q8WUX9 453 aaPredicted RBP16.27■□□□□ 0.2
BRIP1-204ENST00000579028 GRIN2BQ13224 1484 aa16.25■□□□□ 0.19
BRIP1-204ENST00000579028 SYNJ2O15056 1496 aa16.23■□□□□ 0.19
BRIP1-204ENST00000579028 CUX1P39880 1505 aa16.21■□□□□ 0.19
BRIP1-204ENST00000579028 GAPVD1Q14C86 1478 aa16.18■□□□□ 0.18
BRIP1-204ENST00000579028 PBRM1Q86U86 1689 aa16.16■□□□□ 0.18
BRIP1-204ENST00000579028 ABCA5Q8WWZ7 1642 aa16.1■□□□□ 0.17
BRIP1-204ENST00000579028 ABCA10Q8WWZ4 1543 aa16.09■□□□□ 0.17
BRIP1-204ENST00000579028 ERCC6L2Q5T890 1561 aa16.05■□□□□ 0.16
BRIP1-204ENST00000579028 GRIN2AQ12879 1464 aa16.04■□□□□ 0.16
BRIP1-204ENST00000579028 NUP160Q12769 1436 aa16.02■□□□□ 0.15
BRIP1-204ENST00000579028 CEP170Q5SW79 1584 aa16.01■□□□□ 0.15
BRIP1-204ENST00000579028 ADAMTS12P58397 1594 aa16■□□□□ 0.15
BRIP1-204ENST00000579028 SHROOM2Q13796 1616 aa15.99■□□□□ 0.15
BRIP1-204ENST00000579028 WRNQ14191 1432 aaPredicted RBP eCLIP15.94■□□□□ 0.146e-6■■■□□ 16.7
BRIP1-204ENST00000579028 KIF13AQ9H1H9 1805 aa15.94■□□□□ 0.14
BRIP1-204ENST00000579028 FHAD1B1AJZ9 1412 aa15.94■□□□□ 0.14
BRIP1-204ENST00000579028 ERICH3Q5RHP9 1530 aa15.89■□□□□ 0.13
BRIP1-204ENST00000579028 BIVM-ERCC5R4GMW8 1640 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 110.7 ms