RNA–Protein interactions for RNA: ENST00000577645.5

NUP85-206, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 869 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-206ENST00000577645 NISCHQ9Y2I1 1504 aa23.83■■□□□ 1.41
NUP85-206ENST00000577645 CCDC180Q9P1Z9 1646 aa21.45■■□□□ 1.02
NUP85-206ENST00000577645 ABCC9O60706 1549 aa20.67■□□□□ 0.9
NUP85-206ENST00000577645 CHIC1Q5VXU3 224 aa20.42■□□□□ 0.86
NUP85-206ENST00000577645 AEBP2Q6ZN18 517 aaPredicted RBP20.41■□□□□ 0.86
NUP85-206ENST00000577645 RB1CC1Q8TDY2 1594 aa20.1■□□□□ 0.81
NUP85-206ENST00000577645 NACADO15069 1562 aa20.08■□□□□ 0.8
NUP85-206ENST00000577645 MYO15BQ96JP2 1530 aa20.02■□□□□ 0.79
NUP85-206ENST00000577645 ZCCHC6Q5VYS8 1495 aaKnown RBP19.89■□□□□ 0.77
NUP85-206ENST00000577645 DCAF1Q9Y4B6 1507 aa19.87■□□□□ 0.77
NUP85-206ENST00000577645 UNC13AQ9UPW8 1703 aa19.65■□□□□ 0.74
NUP85-206ENST00000577645 DCAF8L2P0C7V8 631 aa19.59■□□□□ 0.73
NUP85-206ENST00000577645 SHROOM4Q9ULL8 1493 aa19.46■□□□□ 0.71
NUP85-206ENST00000577645 DNAJC5BQ9UF47 199 aa19.44■□□□□ 0.7
NUP85-206ENST00000577645 BICRAQ9NZM4 1560 aa19.38■□□□□ 0.69
NUP85-206ENST00000577645 SCRIBQ14160 1630 aa19.31■□□□□ 0.68
NUP85-206ENST00000577645 PABPN1Q86U42 306 aaKnown RBP eCLIP19.14■□□□□ 0.65
NUP85-206ENST00000577645 EIF4G1Q04637 1599 aaKnown RBP18.92■□□□□ 0.62
NUP85-206ENST00000577645 CC2D2AQ9P2K1 1620 aa18.82■□□□□ 0.6
NUP85-206ENST00000577645 CECR2Q9BXF3 1484 aa18.65■□□□□ 0.58
NUP85-206ENST00000577645 BAZ1AQ9NRL2 1556 aaPredicted RBP18.56■□□□□ 0.56
NUP85-206ENST00000577645 SMARCA4P51532 1647 aa18.56■□□□□ 0.56
NUP85-206ENST00000577645 SMARCA2P51531 1590 aa18.5■□□□□ 0.55
NUP85-206ENST00000577645 PEG3Q9GZU2 1588 aa18.46■□□□□ 0.55
NUP85-206ENST00000577645 HMGXB3Q12766 1538 aa18.45■□□□□ 0.54
NUP85-206ENST00000577645 NCAPD3P42695 1498 aa18.42■□□□□ 0.54
NUP85-206ENST00000577645 ATAD2BQ9ULI0 1458 aa18.38■□□□□ 0.53
NUP85-206ENST00000577645 BAZ1BQ9UIG0 1483 aaKnown RBP18.27■□□□□ 0.52
NUP85-206ENST00000577645 MROH2BQ7Z745 1585 aa18.27■□□□□ 0.52
NUP85-206ENST00000577645 DNAJC5Q9H3Z4 198 aa18.24■□□□□ 0.51
NUP85-206ENST00000577645 WIZO95785 1651 aa18.12■□□□□ 0.49
NUP85-206ENST00000577645 LAMC3Q9Y6N6 1575 aa18.06■□□□□ 0.48
NUP85-206ENST00000577645 PHF23Q9BUL5 403 aaPredicted RBP18.04■□□□□ 0.48
NUP85-206ENST00000577645 RSF1Q96T23 1441 aaPredicted RBP18.04■□□□□ 0.48
NUP85-206ENST00000577645 TOP2AP11388 1531 aaKnown RBP18.03■□□□□ 0.48
NUP85-206ENST00000577645 ERCC6Q03468 1493 aa17.93■□□□□ 0.46
NUP85-206ENST00000577645 PRDM2Q13029 1718 aa17.89■□□□□ 0.45
NUP85-206ENST00000577645 CUX2O14529 1486 aa17.88■□□□□ 0.45
NUP85-206ENST00000577645 PDS5BQ9NTI5 1447 aa17.85■□□□□ 0.45
NUP85-206ENST00000577645 NESP48681 1621 aa17.84■□□□□ 0.45
NUP85-206ENST00000577645 CADPSQ9ULU8 1353 aa17.83■□□□□ 0.45
NUP85-206ENST00000577645 KIF21AQ7Z4S6 1674 aa17.83■□□□□ 0.44
NUP85-206ENST00000577645 THOC2Q8NI27 1593 aaKnown RBP17.8■□□□□ 0.44
NUP85-206ENST00000577645 CFTRP13569 1480 aa17.76■□□□□ 0.43
NUP85-206ENST00000577645 CEP164Q9UPV0 1460 aa17.69■□□□□ 0.42
NUP85-206ENST00000577645 MRC2Q9UBG0 1479 aa17.67■□□□□ 0.42
NUP85-206ENST00000577645 CCDC88BA6NC98 1476 aa17.66■□□□□ 0.42
NUP85-206ENST00000577645 WDR62O43379 1518 aa17.66■□□□□ 0.42
NUP85-206ENST00000577645 FANCD2Q9BXW9 1451 aa17.64■□□□□ 0.41
NUP85-206ENST00000577645 ABCC8Q09428 1581 aa17.49■□□□□ 0.39
NUP85-206ENST00000577645 URB2Q14146 1524 aaKnown RBP17.44■□□□□ 0.38
NUP85-206ENST00000577645 DNMBPQ6XZF7 1577 aa17.43■□□□□ 0.38
NUP85-206ENST00000577645 TOPBP1Q92547 1522 aa17.37■□□□□ 0.37
NUP85-206ENST00000577645 SUPT5HO00267 1087 aaKnown RBP17.33■□□□□ 0.36
NUP85-206ENST00000577645 IFT140Q96RY7 1462 aa17.32■□□□□ 0.36
NUP85-206ENST00000577645 WDR97A6NE52 1622 aa17.32■□□□□ 0.36
NUP85-206ENST00000577645 TARBP1Q13395 1621 aaKnown RBP17.23■□□□□ 0.35
NUP85-206ENST00000577645 SENP3Q9H4L4 574 aaPredicted RBP17.22■□□□□ 0.35
NUP85-206ENST00000577645 POLA1P09884 1462 aaPredicted RBP17.21■□□□□ 0.35
NUP85-206ENST00000577645 EIF4G3O43432 1585 aaKnown RBP17.2■□□□□ 0.34
NUP85-206ENST00000577645 CUX1P39880 1505 aa17.18■□□□□ 0.34
NUP85-206ENST00000577645 BIVM-ERCC5R4GMW8 1640 aa17.18■□□□□ 0.34
NUP85-206ENST00000577645 FGD5Q6ZNL6 1462 aa17.14■□□□□ 0.33
NUP85-206ENST00000577645 TOP2BQ02880 1626 aa17.14■□□□□ 0.33
NUP85-206ENST00000577645 ZNF608Q9ULD9 1512 aaPredicted RBP17.09■□□□□ 0.33
NUP85-206ENST00000577645 SOGA1O94964 1423 aa17.07■□□□□ 0.32
NUP85-206ENST00000577645 WRNQ14191 1432 aaPredicted RBP eCLIP17.07■□□□□ 0.32
NUP85-206ENST00000577645 PBRM1Q86U86 1689 aa17.05■□□□□ 0.32
NUP85-206ENST00000577645 ABCA10Q8WWZ4 1543 aa17.04■□□□□ 0.32
NUP85-206ENST00000577645 SYNJ1O43426 1573 aa17.03■□□□□ 0.32
NUP85-206ENST00000577645 TRIM41Q8WV44 630 aa17.03■□□□□ 0.32
NUP85-206ENST00000577645 ABCA5Q8WWZ7 1642 aa17.03■□□□□ 0.32
NUP85-206ENST00000577645 MAGI1Q96QZ7 1491 aaPredicted RBP17.01■□□□□ 0.31
NUP85-206ENST00000577645 RAD54L2Q9Y4B4 1467 aa17.01■□□□□ 0.31
NUP85-206ENST00000577645 CHD1O14646 1710 aa17.01■□□□□ 0.31
NUP85-206ENST00000577645 GRIN2BQ13224 1484 aa16.98■□□□□ 0.31
NUP85-206ENST00000577645 AQRO60306 1485 aaKnown RBP eCLIP16.96■□□□□ 0.312e-7■■■■□ 21.9
NUP85-206ENST00000577645 GAPVD1Q14C86 1478 aa16.94■□□□□ 0.3
NUP85-206ENST00000577645 SNAPC4Q5SXM2 1469 aa16.92■□□□□ 0.3
NUP85-206ENST00000577645 OSCARQ8IYS5 282 aa16.91■□□□□ 0.3
NUP85-206ENST00000577645 SYNJ2O15056 1496 aa16.9■□□□□ 0.3
NUP85-206ENST00000577645 ERICH3Q5RHP9 1530 aa16.9■□□□□ 0.3
NUP85-206ENST00000577645 TDRD9Q8NDG6 1382 aaKnown RBP16.89■□□□□ 0.3
NUP85-206ENST00000577645 ADAMTS12P58397 1594 aa16.86■□□□□ 0.29
NUP85-206ENST00000577645 PLPPR3Q6T4P5 718 aa16.82■□□□□ 0.28
NUP85-206ENST00000577645 CUL7Q14999 1698 aa16.81■□□□□ 0.28
NUP85-206ENST00000577645 CLASP1Q7Z460 1538 aa16.8■□□□□ 0.28
NUP85-206ENST00000577645 FHAD1B1AJZ9 1412 aa16.77■□□□□ 0.27
NUP85-206ENST00000577645 RIMBP3CA6NJZ7 1639 aa16.77■□□□□ 0.27
NUP85-206ENST00000577645 RIMBP3BA6NNM3 1639 aa16.77■□□□□ 0.27
NUP85-206ENST00000577645 RIMBP3Q9UFD9 1639 aa16.77■□□□□ 0.27
NUP85-206ENST00000577645 GRIN2AQ12879 1464 aa16.75■□□□□ 0.27
NUP85-206ENST00000577645 KIF27Q86VH2 1401 aa16.75■□□□□ 0.27
NUP85-206ENST00000577645 ARHGEF11O15085 1522 aa16.75■□□□□ 0.27
NUP85-206ENST00000577645 CHMP7Q8WUX9 453 aaPredicted RBP16.74■□□□□ 0.27
NUP85-206ENST00000577645 FBLN2P98095 1184 aa16.7■□□□□ 0.26
NUP85-206ENST00000577645 NUP160Q12769 1436 aa16.69■□□□□ 0.26
NUP85-206ENST00000577645 CEP170Q5SW79 1584 aa16.66■□□□□ 0.26
NUP85-206ENST00000577645 SHROOM2Q13796 1616 aa16.65■□□□□ 0.26
NUP85-206ENST00000577645 RUSC2Q8N2Y8 1516 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms