RNA–Protein interactions for RNA: ENST00000574680.1

PKMYT1-215, Transcript of protein kinase, membrane associated tyrosine/threonine 1, humanhuman

TSL 2

Gene PKMYT1, Length 717 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKMYT1-215ENST00000574680 NISCHQ9Y2I1 1504 aa30.66■■■□□ 2.5
PKMYT1-215ENST00000574680 CCDC180Q9P1Z9 1646 aa27.38■■□□□ 1.97
PKMYT1-215ENST00000574680 AEBP2Q6ZN18 517 aaPredicted RBP26.94■■□□□ 1.9
PKMYT1-215ENST00000574680 ABCC9O60706 1549 aa26.82■■□□□ 1.88
PKMYT1-215ENST00000574680 CHIC1Q5VXU3 224 aa25.97■■□□□ 1.75
PKMYT1-215ENST00000574680 RB1CC1Q8TDY2 1594 aa25.77■■□□□ 1.72
PKMYT1-215ENST00000574680 NACADO15069 1562 aa25.7■■□□□ 1.71
PKMYT1-215ENST00000574680 ZCCHC6Q5VYS8 1495 aaKnown RBP25.56■■□□□ 1.68
PKMYT1-215ENST00000574680 MYO15BQ96JP2 1530 aa25.53■■□□□ 1.68
PKMYT1-215ENST00000574680 DCAF8L2P0C7V8 631 aa25.48■■□□□ 1.67
PKMYT1-215ENST00000574680 DCAF1Q9Y4B6 1507 aa25.38■■□□□ 1.65
PKMYT1-215ENST00000574680 UNC13AQ9UPW8 1703 aa25.26■■□□□ 1.63
PKMYT1-215ENST00000574680 BICRAQ9NZM4 1560 aa25.05■■□□□ 1.6
PKMYT1-215ENST00000574680 PABPN1Q86U42 306 aaKnown RBP eCLIP24.97■■□□□ 1.59
PKMYT1-215ENST00000574680 SCRIBQ14160 1630 aa24.94■■□□□ 1.58
PKMYT1-215ENST00000574680 SHROOM4Q9ULL8 1493 aa24.76■■□□□ 1.55
PKMYT1-215ENST00000574680 DNAJC5BQ9UF47 199 aa24.69■■□□□ 1.54
PKMYT1-215ENST00000574680 EIF4G1Q04637 1599 aaKnown RBP24.37■■□□□ 1.49
PKMYT1-215ENST00000574680 CC2D2AQ9P2K1 1620 aa24.3■■□□□ 1.48
PKMYT1-215ENST00000574680 CECR2Q9BXF3 1484 aa24.11■■□□□ 1.45
PKMYT1-215ENST00000574680 SMARCA4P51532 1647 aa23.85■■□□□ 1.41
PKMYT1-215ENST00000574680 BAZ1AQ9NRL2 1556 aaPredicted RBP23.78■■□□□ 1.4
PKMYT1-215ENST00000574680 ATAD2BQ9ULI0 1458 aa23.71■■□□□ 1.39
PKMYT1-215ENST00000574680 NCAPD3P42695 1498 aa23.7■■□□□ 1.38
PKMYT1-215ENST00000574680 SMARCA2P51531 1590 aa23.68■■□□□ 1.38
PKMYT1-215ENST00000574680 MROH2BQ7Z745 1585 aa23.64■■□□□ 1.37
PKMYT1-215ENST00000574680 PEG3Q9GZU2 1588 aa23.64■■□□□ 1.37
PKMYT1-215ENST00000574680 HMGXB3Q12766 1538 aa23.64■■□□□ 1.37
PKMYT1-215ENST00000574680 BAZ1BQ9UIG0 1483 aaKnown RBP23.5■■□□□ 1.35
PKMYT1-215ENST00000574680 WIZO95785 1651 aa23.39■■□□□ 1.34
PKMYT1-215ENST00000574680 RSF1Q96T23 1441 aaPredicted RBP23.29■■□□□ 1.32
PKMYT1-215ENST00000574680 NESP48681 1621 aa23.2■■□□□ 1.3
PKMYT1-215ENST00000574680 LAMC3Q9Y6N6 1575 aa23.14■■□□□ 1.29
PKMYT1-215ENST00000574680 TOP2AP11388 1531 aaKnown RBP23.13■■□□□ 1.29
PKMYT1-215ENST00000574680 ERCC6Q03468 1493 aa23.1■■□□□ 1.29
PKMYT1-215ENST00000574680 KIF21AQ7Z4S6 1674 aa22.97■■□□□ 1.27
PKMYT1-215ENST00000574680 CADPSQ9ULU8 1353 aa22.97■■□□□ 1.27
PKMYT1-215ENST00000574680 THOC2Q8NI27 1593 aaKnown RBP22.95■■□□□ 1.26
PKMYT1-215ENST00000574680 CUX2O14529 1486 aa22.94■■□□□ 1.26
PKMYT1-215ENST00000574680 PDS5BQ9NTI5 1447 aa22.91■■□□□ 1.26
PKMYT1-215ENST00000574680 PHF23Q9BUL5 403 aaPredicted RBP22.86■■□□□ 1.25
PKMYT1-215ENST00000574680 CFTRP13569 1480 aa22.85■■□□□ 1.25
PKMYT1-215ENST00000574680 SENP3Q9H4L4 574 aaPredicted RBP22.83■■□□□ 1.25
PKMYT1-215ENST00000574680 CCDC88BA6NC98 1476 aa22.81■■□□□ 1.24
PKMYT1-215ENST00000574680 PRDM2Q13029 1718 aa22.76■■□□□ 1.23
PKMYT1-215ENST00000574680 FANCD2Q9BXW9 1451 aa22.75■■□□□ 1.23
PKMYT1-215ENST00000574680 MRC2Q9UBG0 1479 aa22.74■■□□□ 1.23
PKMYT1-215ENST00000574680 CEP164Q9UPV0 1460 aa22.74■■□□□ 1.23
PKMYT1-215ENST00000574680 WDR62O43379 1518 aa22.71■■□□□ 1.23
PKMYT1-215ENST00000574680 URB2Q14146 1524 aaKnown RBP22.56■■□□□ 1.2
PKMYT1-215ENST00000574680 SUPT5HO00267 1087 aaKnown RBP22.49■■□□□ 1.19
PKMYT1-215ENST00000574680 TOPBP1Q92547 1522 aa22.38■■□□□ 1.17
PKMYT1-215ENST00000574680 DNMBPQ6XZF7 1577 aa22.37■■□□□ 1.17
PKMYT1-215ENST00000574680 ABCC8Q09428 1581 aa22.33■■□□□ 1.16
PKMYT1-215ENST00000574680 DNAJC5Q9H3Z4 198 aa22.29■■□□□ 1.16
PKMYT1-215ENST00000574680 IFT140Q96RY7 1462 aa22.25■■□□□ 1.15
PKMYT1-215ENST00000574680 POLA1P09884 1462 aaPredicted RBP22.2■■□□□ 1.14
PKMYT1-215ENST00000574680 CUX1P39880 1505 aa22.19■■□□□ 1.14
PKMYT1-215ENST00000574680 ZNF608Q9ULD9 1512 aaPredicted RBP22.19■■□□□ 1.14
PKMYT1-215ENST00000574680 TARBP1Q13395 1621 aaKnown RBP22.19■■□□□ 1.14
PKMYT1-215ENST00000574680 EIF4G3O43432 1585 aaKnown RBP22.16■■□□□ 1.14
PKMYT1-215ENST00000574680 FGD5Q6ZNL6 1462 aa22.12■■□□□ 1.13
PKMYT1-215ENST00000574680 RAD54L2Q9Y4B4 1467 aa22.08■■□□□ 1.12
PKMYT1-215ENST00000574680 WDR97A6NE52 1622 aa22.03■■□□□ 1.12
PKMYT1-215ENST00000574680 SOGA1O94964 1423 aa22.03■■□□□ 1.12
PKMYT1-215ENST00000574680 AQRO60306 1485 aaKnown RBP eCLIP22■■□□□ 1.118e-25■■■■□ 20.8
PKMYT1-215ENST00000574680 BIVM-ERCC5R4GMW8 1640 aa21.99■■□□□ 1.11
PKMYT1-215ENST00000574680 SYNJ1O43426 1573 aa21.98■■□□□ 1.11
PKMYT1-215ENST00000574680 TOP2BQ02880 1626 aa21.97■■□□□ 1.11
PKMYT1-215ENST00000574680 WRNQ14191 1432 aaPredicted RBP eCLIP21.96■■□□□ 1.11
PKMYT1-215ENST00000574680 TDRD9Q8NDG6 1382 aaKnown RBP21.92■■□□□ 1.1
PKMYT1-215ENST00000574680 ABCA10Q8WWZ4 1543 aa21.9■■□□□ 1.1
PKMYT1-215ENST00000574680 CHD1O14646 1710 aa21.89■■□□□ 1.09
PKMYT1-215ENST00000574680 ABCA5Q8WWZ7 1642 aa21.88■■□□□ 1.09
PKMYT1-215ENST00000574680 PBRM1Q86U86 1689 aa21.85■■□□□ 1.09
PKMYT1-215ENST00000574680 OSCARQ8IYS5 282 aa21.85■■□□□ 1.09
PKMYT1-215ENST00000574680 SNAPC4Q5SXM2 1469 aa21.84■■□□□ 1.09
PKMYT1-215ENST00000574680 GRIN2BQ13224 1484 aa21.83■■□□□ 1.08
PKMYT1-215ENST00000574680 GAPVD1Q14C86 1478 aa21.81■■□□□ 1.08
PKMYT1-215ENST00000574680 MAGI1Q96QZ7 1491 aaPredicted RBP21.8■■□□□ 1.08
PKMYT1-215ENST00000574680 SYNJ2O15056 1496 aa21.71■■□□□ 1.07
PKMYT1-215ENST00000574680 ADAMTS12P58397 1594 aa21.68■■□□□ 1.06
PKMYT1-215ENST00000574680 FBLN2P98095 1184 aa21.67■■□□□ 1.06
PKMYT1-215ENST00000574680 RIMBP3CA6NJZ7 1639 aa21.66■■□□□ 1.06
PKMYT1-215ENST00000574680 RIMBP3BA6NNM3 1639 aa21.66■■□□□ 1.06
PKMYT1-215ENST00000574680 RIMBP3Q9UFD9 1639 aa21.66■■□□□ 1.06
PKMYT1-215ENST00000574680 CLASP1Q7Z460 1538 aa21.65■■□□□ 1.06
PKMYT1-215ENST00000574680 ARHGEF11O15085 1522 aa21.64■■□□□ 1.05
PKMYT1-215ENST00000574680 ERICH3Q5RHP9 1530 aa21.63■■□□□ 1.05
PKMYT1-215ENST00000574680 CHMP7Q8WUX9 453 aaPredicted RBP21.6■■□□□ 1.05
PKMYT1-215ENST00000574680 GRIN2AQ12879 1464 aa21.58■■□□□ 1.04
PKMYT1-215ENST00000574680 FHAD1B1AJZ9 1412 aa21.55■■□□□ 1.04
PKMYT1-215ENST00000574680 CEP170Q5SW79 1584 aa21.51■■□□□ 1.03
PKMYT1-215ENST00000574680 TRIM41Q8WV44 630 aa21.49■■□□□ 1.03
PKMYT1-215ENST00000574680 NUP160Q12769 1436 aa21.48■■□□□ 1.03
PKMYT1-215ENST00000574680 KIF27Q86VH2 1401 aa21.48■■□□□ 1.03
PKMYT1-215ENST00000574680 ARAP1Q96P48 1450 aa21.46■■□□□ 1.03
PKMYT1-215ENST00000574680 CUL7Q14999 1698 aa21.44■■□□□ 1.02
PKMYT1-215ENST00000574680 IGF1RP08069 1367 aa21.39■■□□□ 1.02
PKMYT1-215ENST00000574680 SHROOM2Q13796 1616 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms