RNA–Protein interactions for RNA: ENST00000573412.1

CCP110-211, Transcript of centriolar coiled-coil protein 110, humanhuman

TSL 3

Gene CCP110, Length 673 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCP110-211ENST00000573412 NISCHQ9Y2I1 1504 aa37.27■■■■□ 3.56
CCP110-211ENST00000573412 AEBP2Q6ZN18 517 aaPredicted RBP34.46■■■■□ 3.11
CCP110-211ENST00000573412 ABCC9O60706 1549 aa34.36■■■■□ 3.09
CCP110-211ENST00000573412 CCDC180Q9P1Z9 1646 aa33.75■■■□□ 2.99
CCP110-211ENST00000573412 CHIC1Q5VXU3 224 aa33.46■■■□□ 2.95
CCP110-211ENST00000573412 DNAJC5BQ9UF47 199 aa32.87■■■□□ 2.85
CCP110-211ENST00000573412 RB1CC1Q8TDY2 1594 aa32.41■■■□□ 2.78
CCP110-211ENST00000573412 NACADO15069 1562 aa32.05■■■□□ 2.72
CCP110-211ENST00000573412 PABPN1Q86U42 306 aaKnown RBP eCLIP31.88■■■□□ 2.69
CCP110-211ENST00000573412 UNC13AQ9UPW8 1703 aa31.76■■■□□ 2.67
CCP110-211ENST00000573412 DCAF8L2P0C7V8 631 aa31.67■■■□□ 2.66
CCP110-211ENST00000573412 BICRAQ9NZM4 1560 aa31.56■■■□□ 2.64
CCP110-211ENST00000573412 MYO15BQ96JP2 1530 aa31.4■■■□□ 2.62
CCP110-211ENST00000573412 CC2D2AQ9P2K1 1620 aa31.03■■■□□ 2.56
CCP110-211ENST00000573412 CECR2Q9BXF3 1484 aa31.02■■■□□ 2.56
CCP110-211ENST00000573412 SHROOM4Q9ULL8 1493 aa31.01■■■□□ 2.55
CCP110-211ENST00000573412 EIF4G1Q04637 1599 aaKnown RBP30.79■■■□□ 2.52
CCP110-211ENST00000573412 DCAF1Q9Y4B6 1507 aa30.75■■■□□ 2.51
CCP110-211ENST00000573412 ZCCHC6Q5VYS8 1495 aaKnown RBP30.74■■■□□ 2.51
CCP110-211ENST00000573412 SCRIBQ14160 1630 aa30.68■■■□□ 2.5
CCP110-211ENST00000573412 DNAJC5Q9H3Z4 198 aa30.65■■■□□ 2.5
CCP110-211ENST00000573412 CUX2O14529 1486 aa29.9■■■□□ 2.38
CCP110-211ENST00000573412 ERCC6Q03468 1493 aa29.68■■■□□ 2.34
CCP110-211ENST00000573412 NCAPD3P42695 1498 aa29.6■■■□□ 2.33
CCP110-211ENST00000573412 ATAD2BQ9ULI0 1458 aa29.41■■■□□ 2.3
CCP110-211ENST00000573412 SENP3Q9H4L4 574 aaPredicted RBP29.38■■■□□ 2.29
CCP110-211ENST00000573412 NESP48681 1621 aa29.35■■■□□ 2.29
CCP110-211ENST00000573412 PHF23Q9BUL5 403 aaPredicted RBP29.34■■■□□ 2.29
CCP110-211ENST00000573412 HMGXB3Q12766 1538 aa29.31■■■□□ 2.28
CCP110-211ENST00000573412 SMARCA2P51531 1590 aa29.28■■■□□ 2.28
CCP110-211ENST00000573412 SMARCA4P51532 1647 aa29.22■■■□□ 2.27
CCP110-211ENST00000573412 THOC2Q8NI27 1593 aaKnown RBP29.2■■■□□ 2.26
CCP110-211ENST00000573412 BAZ1BQ9UIG0 1483 aaKnown RBP29.06■■■□□ 2.24
CCP110-211ENST00000573412 LAMC3Q9Y6N6 1575 aa29.03■■■□□ 2.24
CCP110-211ENST00000573412 TRIM41Q8WV44 630 aa28.98■■■□□ 2.23
CCP110-211ENST00000573412 KIF21AQ7Z4S6 1674 aa28.96■■■□□ 2.23
CCP110-211ENST00000573412 BAZ1AQ9NRL2 1556 aaPredicted RBP28.96■■■□□ 2.23
CCP110-211ENST00000573412 PEG3Q9GZU2 1588 aa28.95■■■□□ 2.22
CCP110-211ENST00000573412 PDS5BQ9NTI5 1447 aa28.86■■■□□ 2.21
CCP110-211ENST00000573412 MROH2BQ7Z745 1585 aa28.72■■■□□ 2.19
CCP110-211ENST00000573412 MRC2Q9UBG0 1479 aa28.66■■■□□ 2.18
CCP110-211ENST00000573412 CADPSQ9ULU8 1353 aa28.65■■■□□ 2.18
CCP110-211ENST00000573412 WDR62O43379 1518 aa28.64■■■□□ 2.17
CCP110-211ENST00000573412 CEP164Q9UPV0 1460 aa28.4■■■□□ 2.14
CCP110-211ENST00000573412 OSCARQ8IYS5 282 aa28.4■■■□□ 2.14
CCP110-211ENST00000573412 WIZO95785 1651 aa28.35■■■□□ 2.13
CCP110-211ENST00000573412 FANCD2Q9BXW9 1451 aa28.33■■■□□ 2.13
CCP110-211ENST00000573412 CFTRP13569 1480 aa28.2■■■□□ 2.1
CCP110-211ENST00000573412 URB2Q14146 1524 aaKnown RBP28.16■■■□□ 2.1
CCP110-211ENST00000573412 RIMBP3CA6NJZ7 1639 aa28.14■■■□□ 2.1
CCP110-211ENST00000573412 RIMBP3BA6NNM3 1639 aa28.14■■■□□ 2.1
CCP110-211ENST00000573412 RIMBP3Q9UFD9 1639 aa28.14■■■□□ 2.1
CCP110-211ENST00000573412 ARHGEF11O15085 1522 aa27.97■■■□□ 2.07
CCP110-211ENST00000573412 TOP2AP11388 1531 aaKnown RBP27.92■■■□□ 2.06
CCP110-211ENST00000573412 ZNF608Q9ULD9 1512 aaPredicted RBP27.92■■■□□ 2.06
CCP110-211ENST00000573412 PRDM2Q13029 1718 aa27.89■■■□□ 2.06
CCP110-211ENST00000573412 RSF1Q96T23 1441 aaPredicted RBP27.87■■■□□ 2.05
CCP110-211ENST00000573412 IFT140Q96RY7 1462 aa27.87■■■□□ 2.05
CCP110-211ENST00000573412 CYB5RLQ6IPT4 315 aa27.78■■■□□ 2.04
CCP110-211ENST00000573412 TOPBP1Q92547 1522 aa27.72■■■□□ 2.03
CCP110-211ENST00000573412 EIF4G3O43432 1585 aaKnown RBP27.72■■■□□ 2.03
CCP110-211ENST00000573412 CHD1O14646 1710 aa27.67■■■□□ 2.02
CCP110-211ENST00000573412 ARAP1Q96P48 1450 aa27.66■■■□□ 2.02
CCP110-211ENST00000573412 TRHP20396 242 aaPredicted RBP27.65■■■□□ 2.02
CCP110-211ENST00000573412 CCDC88BA6NC98 1476 aa27.62■■■□□ 2.01
CCP110-211ENST00000573412 ABCC8Q09428 1581 aa27.6■■■□□ 2.01
CCP110-211ENST00000573412 AQRO60306 1485 aaKnown RBP eCLIP27.57■■■□□ 2
CCP110-211ENST00000573412 DNMBPQ6XZF7 1577 aa27.56■■■□□ 2
CCP110-211ENST00000573412 TARBP1Q13395 1621 aaKnown RBP27.56■■■□□ 2
CCP110-211ENST00000573412 FBLN2P98095 1184 aa27.47■■□□□ 1.99
CCP110-211ENST00000573412 POLA1P09884 1462 aaPredicted RBP27.4■■□□□ 1.98
CCP110-211ENST00000573412 CLASP1Q7Z460 1538 aa27.33■■□□□ 1.97
CCP110-211ENST00000573412 RAD54L2Q9Y4B4 1467 aa27.31■■□□□ 1.96
CCP110-211ENST00000573412 TDRD9Q8NDG6 1382 aaKnown RBP27.28■■□□□ 1.96
CCP110-211ENST00000573412 SNAPC4Q5SXM2 1469 aa27.26■■□□□ 1.95
CCP110-211ENST00000573412 SOGA1O94964 1423 aa27.24■■□□□ 1.95
CCP110-211ENST00000573412 FOXD1Q16676 465 aa27.24■■□□□ 1.95
CCP110-211ENST00000573412 SYNJ1O43426 1573 aa27.22■■□□□ 1.95
CCP110-211ENST00000573412 WDR97A6NE52 1622 aa27.2■■□□□ 1.95
CCP110-211ENST00000573412 CHMP7Q8WUX9 453 aaPredicted RBP27.17■■□□□ 1.94
CCP110-211ENST00000573412 MAGI1Q96QZ7 1491 aaPredicted RBP27.16■■□□□ 1.94
CCP110-211ENST00000573412 FGD5Q6ZNL6 1462 aa27.13■■□□□ 1.93
CCP110-211ENST00000573412 GRIN2BQ13224 1484 aa27.09■■□□□ 1.93
CCP110-211ENST00000573412 PLPPR3Q6T4P5 718 aa27.09■■□□□ 1.93
CCP110-211ENST00000573412 SYNJ2O15056 1496 aa27.08■■□□□ 1.93
CCP110-211ENST00000573412 GAPVD1Q14C86 1478 aa27.05■■□□□ 1.92
CCP110-211ENST00000573412 CUX1P39880 1505 aa27.02■■□□□ 1.92
CCP110-211ENST00000573412 PBRM1Q86U86 1689 aa26.97■■□□□ 1.91
CCP110-211ENST00000573412 ERCC6L2Q5T890 1561 aa26.86■■□□□ 1.89
CCP110-211ENST00000573412 ABCA5Q8WWZ7 1642 aa26.83■■□□□ 1.88
CCP110-211ENST00000573412 ABCA10Q8WWZ4 1543 aa26.79■■□□□ 1.88
CCP110-211ENST00000573412 CEP170Q5SW79 1584 aa26.75■■□□□ 1.87
CCP110-211ENST00000573412 GRIN2AQ12879 1464 aa26.74■■□□□ 1.87
CCP110-211ENST00000573412 KIF13AQ9H1H9 1805 aa26.72■■□□□ 1.87
CCP110-211ENST00000573412 NUP160Q12769 1436 aa26.7■■□□□ 1.86
CCP110-211ENST00000573412 SHROOM2Q13796 1616 aa26.68■■□□□ 1.86
CCP110-211ENST00000573412 ADAMTS12P58397 1594 aa26.67■■□□□ 1.86
CCP110-211ENST00000573412 FHAD1B1AJZ9 1412 aa26.54■■□□□ 1.84
CCP110-211ENST00000573412 WRNQ14191 1432 aaPredicted RBP eCLIP26.52■■□□□ 1.84
CCP110-211ENST00000573412 PRG4Q92954 1404 aaPredicted RBP26.47■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms