RNA–Protein interactions for RNA: ENST00000572869.1

LCMT1-207, Transcript of leucine carboxyl methyltransferase 1, humanhuman

TSL 3

Gene LCMT1, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT1-207ENST00000572869 AEBP2Q6ZN18 517 aaPredicted RBP24.25■■□□□ 1.47
LCMT1-207ENST00000572869 CHIC1Q5VXU3 224 aa23.99■■□□□ 1.43
LCMT1-207ENST00000572869 NISCHQ9Y2I1 1504 aa23.48■■□□□ 1.35
LCMT1-207ENST00000572869 ABCC9O60706 1549 aa21.86■■□□□ 1.09
LCMT1-207ENST00000572869 CCDC180Q9P1Z9 1646 aa21.32■■□□□ 1
LCMT1-207ENST00000572869 PHF23Q9BUL5 403 aaPredicted RBP21.13■□□□□ 0.97
LCMT1-207ENST00000572869 DNAJC5BQ9UF47 199 aa21.03■□□□□ 0.96
LCMT1-207ENST00000572869 RB1CC1Q8TDY2 1594 aa20.56■□□□□ 0.88
LCMT1-207ENST00000572869 SENP3Q9H4L4 574 aaPredicted RBP20.52■□□□□ 0.88
LCMT1-207ENST00000572869 NACADO15069 1562 aa20.29■□□□□ 0.84
LCMT1-207ENST00000572869 PABPN1Q86U42 306 aaKnown RBP eCLIP20.25■□□□□ 0.83
LCMT1-207ENST00000572869 UNC13AQ9UPW8 1703 aa20.07■□□□□ 0.8
LCMT1-207ENST00000572869 BICRAQ9NZM4 1560 aa20.01■□□□□ 0.79
LCMT1-207ENST00000572869 DCAF8L2P0C7V8 631 aa19.97■□□□□ 0.79
LCMT1-207ENST00000572869 MYO15BQ96JP2 1530 aa19.86■□□□□ 0.77
LCMT1-207ENST00000572869 CECR2Q9BXF3 1484 aa19.77■□□□□ 0.76
LCMT1-207ENST00000572869 DNAJC5Q9H3Z4 198 aa19.74■□□□□ 0.75
LCMT1-207ENST00000572869 CC2D2AQ9P2K1 1620 aa19.73■□□□□ 0.75
LCMT1-207ENST00000572869 SHROOM4Q9ULL8 1493 aa19.71■□□□□ 0.75
LCMT1-207ENST00000572869 PLPPR3Q6T4P5 718 aa19.62■□□□□ 0.73
LCMT1-207ENST00000572869 EIF4G1Q04637 1599 aaKnown RBP19.56■□□□□ 0.72
LCMT1-207ENST00000572869 DCAF1Q9Y4B6 1507 aa19.38■□□□□ 0.69
LCMT1-207ENST00000572869 SCRIBQ14160 1630 aa19.37■□□□□ 0.69
LCMT1-207ENST00000572869 ZCCHC6Q5VYS8 1495 aaKnown RBP19.35■□□□□ 0.69
LCMT1-207ENST00000572869 CUX2O14529 1486 aa19.11■□□□□ 0.65
LCMT1-207ENST00000572869 FOXD1Q16676 465 aa19■□□□□ 0.63
LCMT1-207ENST00000572869 ERCC6Q03468 1493 aa18.91■□□□□ 0.62
LCMT1-207ENST00000572869 NCAPD3P42695 1498 aa18.75■□□□□ 0.59
LCMT1-207ENST00000572869 NESP48681 1621 aa18.63■□□□□ 0.57
LCMT1-207ENST00000572869 ATAD2BQ9ULI0 1458 aa18.6■□□□□ 0.57
LCMT1-207ENST00000572869 TRIM41Q8WV44 630 aa18.59■□□□□ 0.57
LCMT1-207ENST00000572869 THOC2Q8NI27 1593 aaKnown RBP18.57■□□□□ 0.56
LCMT1-207ENST00000572869 HMGXB3Q12766 1538 aa18.56■□□□□ 0.56
LCMT1-207ENST00000572869 ADRA2BP18089 450 aa18.54■□□□□ 0.56
LCMT1-207ENST00000572869 PPP6R1Q9UPN7 881 aa18.53■□□□□ 0.56
LCMT1-207ENST00000572869 SMARCA2P51531 1590 aa18.52■□□□□ 0.56
LCMT1-207ENST00000572869 SMARCA4P51532 1647 aa18.44■□□□□ 0.54
LCMT1-207ENST00000572869 LAMC3Q9Y6N6 1575 aa18.41■□□□□ 0.54
LCMT1-207ENST00000572869 BAZ1BQ9UIG0 1483 aaKnown RBP18.38■□□□□ 0.53
LCMT1-207ENST00000572869 KIF21AQ7Z4S6 1674 aa18.35■□□□□ 0.53
LCMT1-207ENST00000572869 PDS5BQ9NTI5 1447 aa18.32■□□□□ 0.52
LCMT1-207ENST00000572869 PEG3Q9GZU2 1588 aa18.28■□□□□ 0.52
LCMT1-207ENST00000572869 BAZ1AQ9NRL2 1556 aaPredicted RBP18.25■□□□□ 0.51
LCMT1-207ENST00000572869 MRC2Q9UBG0 1479 aa18.2■□□□□ 0.5
LCMT1-207ENST00000572869 WDR62O43379 1518 aa18.19■□□□□ 0.5
LCMT1-207ENST00000572869 CADPSQ9ULU8 1353 aa18.14■□□□□ 0.49
LCMT1-207ENST00000572869 OSCARQ8IYS5 282 aa18.1■□□□□ 0.49
LCMT1-207ENST00000572869 MROH2BQ7Z745 1585 aa18.08■□□□□ 0.49
LCMT1-207ENST00000572869 PIAS4Q8N2W9 510 aaPredicted RBP18.02■□□□□ 0.48
LCMT1-207ENST00000572869 CEP164Q9UPV0 1460 aa18.01■□□□□ 0.47
LCMT1-207ENST00000572869 RIMBP3CA6NJZ7 1639 aa17.95■□□□□ 0.46
LCMT1-207ENST00000572869 RIMBP3BA6NNM3 1639 aa17.95■□□□□ 0.46
LCMT1-207ENST00000572869 RIMBP3Q9UFD9 1639 aa17.95■□□□□ 0.46
LCMT1-207ENST00000572869 FANCD2Q9BXW9 1451 aa17.94■□□□□ 0.46
LCMT1-207ENST00000572869 ARHGEF11O15085 1522 aa17.84■□□□□ 0.45
LCMT1-207ENST00000572869 URB2Q14146 1524 aaKnown RBP17.83■□□□□ 0.45
LCMT1-207ENST00000572869 CFTRP13569 1480 aa17.82■□□□□ 0.44
LCMT1-207ENST00000572869 WIZO95785 1651 aa17.81■□□□□ 0.44
LCMT1-207ENST00000572869 ZNF608Q9ULD9 1512 aaPredicted RBP17.71■□□□□ 0.43
LCMT1-207ENST00000572869 CYB5RLQ6IPT4 315 aa17.7■□□□□ 0.42
LCMT1-207ENST00000572869 TRHP20396 242 aaPredicted RBP17.68■□□□□ 0.42
LCMT1-207ENST00000572869 IFT140Q96RY7 1462 aa17.68■□□□□ 0.42
LCMT1-207ENST00000572869 ARAP1Q96P48 1450 aa17.64■□□□□ 0.41
LCMT1-207ENST00000572869 EIF4G3O43432 1585 aaKnown RBP17.57■□□□□ 0.4
LCMT1-207ENST00000572869 TOP2AP11388 1531 aaKnown RBP17.57■□□□□ 0.4
LCMT1-207ENST00000572869 PRDM2Q13029 1718 aa17.55■□□□□ 0.4
LCMT1-207ENST00000572869 RSF1Q96T23 1441 aaPredicted RBP17.55■□□□□ 0.4
LCMT1-207ENST00000572869 TOPBP1Q92547 1522 aa17.53■□□□□ 0.4
LCMT1-207ENST00000572869 CHD1O14646 1710 aa17.53■□□□□ 0.4
LCMT1-207ENST00000572869 AQRO60306 1485 aaKnown RBP eCLIP17.45■□□□□ 0.38
LCMT1-207ENST00000572869 ABCC8Q09428 1581 aa17.45■□□□□ 0.38
LCMT1-207ENST00000572869 TARBP1Q13395 1621 aaKnown RBP17.43■□□□□ 0.38
LCMT1-207ENST00000572869 DNMBPQ6XZF7 1577 aa17.42■□□□□ 0.38
LCMT1-207ENST00000572869 FBLN2P98095 1184 aa17.41■□□□□ 0.38
LCMT1-207ENST00000572869 MSH5O43196 834 aa17.39■□□□□ 0.37
LCMT1-207ENST00000572869 CCDC88BA6NC98 1476 aa17.37■□□□□ 0.37
LCMT1-207ENST00000572869 CLASP1Q7Z460 1538 aa17.36■□□□□ 0.37
LCMT1-207ENST00000572869 PPP4R3CPQ6ZMV5 832 aa17.33■□□□□ 0.36
LCMT1-207ENST00000572869 POLA1P09884 1462 aaPredicted RBP17.32■□□□□ 0.36
LCMT1-207ENST00000572869 KCNA4P22459 653 aa17.32■□□□□ 0.36
LCMT1-207ENST00000572869 SNAPC4Q5SXM2 1469 aa17.28■□□□□ 0.36
LCMT1-207ENST00000572869 SYNJ1O43426 1573 aa17.28■□□□□ 0.36
LCMT1-207ENST00000572869 TDRD9Q8NDG6 1382 aaKnown RBP17.26■□□□□ 0.35
LCMT1-207ENST00000572869 RAD54L2Q9Y4B4 1467 aa17.25■□□□□ 0.35
LCMT1-207ENST00000572869 WDR97A6NE52 1622 aa17.22■□□□□ 0.35
LCMT1-207ENST00000572869 SOGA1O94964 1423 aa17.21■□□□□ 0.35
LCMT1-207ENST00000572869 MAGI1Q96QZ7 1491 aaPredicted RBP17.21■□□□□ 0.35
LCMT1-207ENST00000572869 CHMP7Q8WUX9 453 aaPredicted RBP17.21■□□□□ 0.35
LCMT1-207ENST00000572869 GAPVD1Q14C86 1478 aa17.19■□□□□ 0.34
LCMT1-207ENST00000572869 SYNJ2O15056 1496 aa17.16■□□□□ 0.34
LCMT1-207ENST00000572869 GRIN2BQ13224 1484 aa17.15■□□□□ 0.34
LCMT1-207ENST00000572869 FGD5Q6ZNL6 1462 aa17.12■□□□□ 0.33
LCMT1-207ENST00000572869 ERCC6L2Q5T890 1561 aa17.03■□□□□ 0.32
LCMT1-207ENST00000572869 CUX1P39880 1505 aa17.02■□□□□ 0.32
LCMT1-207ENST00000572869 PBRM1Q86U86 1689 aa17.02■□□□□ 0.32
LCMT1-207ENST00000572869 KIF13AQ9H1H9 1805 aa16.96■□□□□ 0.31
LCMT1-207ENST00000572869 NCBP3Q53F19 620 aaKnown RBP16.96■□□□□ 0.31
LCMT1-207ENST00000572869 CEP170Q5SW79 1584 aa16.95■□□□□ 0.3
LCMT1-207ENST00000572869 ABCA5Q8WWZ7 1642 aa16.94■□□□□ 0.3
LCMT1-207ENST00000572869 GRIN2AQ12879 1464 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms