RNA–Protein interactions for RNA: ENST00000569925.1

USP10-217, Transcript of ubiquitin specific peptidase 10, humanhuman

TSL 3

Gene USP10, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP10-217ENST00000569925 AEBP2Q6ZN18 517 aaPredicted RBP17.68■□□□□ 0.42
USP10-217ENST00000569925 CHIC1Q5VXU3 224 aa16.41■□□□□ 0.22
USP10-217ENST00000569925 NISCHQ9Y2I1 1504 aa16.36■□□□□ 0.21
USP10-217ENST00000569925 ABCC9O60706 1549 aa15.53■□□□□ 0.08
USP10-217ENST00000569925 DNAJC5BQ9UF47 199 aa15.24■□□□□ 0.03
USP10-217ENST00000569925 SENP3Q9H4L4 574 aaPredicted RBP14.97□□□□□ -0.01
USP10-217ENST00000569925 CCDC180Q9P1Z9 1646 aa14.89□□□□□ -0.03
USP10-217ENST00000569925 PHF23Q9BUL5 403 aaPredicted RBP14.82□□□□□ -0.04
USP10-217ENST00000569925 RB1CC1Q8TDY2 1594 aa14.48□□□□□ -0.09
USP10-217ENST00000569925 DNAJC5Q9H3Z4 198 aa14.43□□□□□ -0.1
USP10-217ENST00000569925 PABPN1Q86U42 306 aaKnown RBP eCLIP14.41□□□□□ -0.1
USP10-217ENST00000569925 NACADO15069 1562 aa14.26□□□□□ -0.13
USP10-217ENST00000569925 UNC13AQ9UPW8 1703 aa14.18□□□□□ -0.14
USP10-217ENST00000569925 BICRAQ9NZM4 1560 aa14.14□□□□□ -0.15
USP10-217ENST00000569925 FOXD1Q16676 465 aa14.12□□□□□ -0.15
USP10-217ENST00000569925 DCAF8L2P0C7V8 631 aa14.1□□□□□ -0.15
USP10-217ENST00000569925 CECR2Q9BXF3 1484 aa14.05□□□□□ -0.16
USP10-217ENST00000569925 CC2D2AQ9P2K1 1620 aa13.99□□□□□ -0.17
USP10-217ENST00000569925 MYO15BQ96JP2 1530 aa13.89□□□□□ -0.19
USP10-217ENST00000569925 SHROOM4Q9ULL8 1493 aa13.82□□□□□ -0.2
USP10-217ENST00000569925 EIF4G1Q04637 1599 aaKnown RBP13.81□□□□□ -0.2
USP10-217ENST00000569925 POTEDQ86YR6 584 aa13.65□□□□□ -0.22
USP10-217ENST00000569925 CUX2O14529 1486 aa13.62□□□□□ -0.23
USP10-217ENST00000569925 SCRIBQ14160 1630 aa13.53□□□□□ -0.24
USP10-217ENST00000569925 DCAF1Q9Y4B6 1507 aa13.48□□□□□ -0.25
USP10-217ENST00000569925 TRIM41Q8WV44 630 aa13.45□□□□□ -0.26
USP10-217ENST00000569925 ERCC6Q03468 1493 aa13.41□□□□□ -0.26
USP10-217ENST00000569925 ZCCHC6Q5VYS8 1495 aaKnown RBP13.4□□□□□ -0.26
USP10-217ENST00000569925 NCAPD3P42695 1498 aa13.23□□□□□ -0.29
USP10-217ENST00000569925 MSH5O43196 834 aa13.21□□□□□ -0.29
USP10-217ENST00000569925 NESP48681 1621 aa13.18□□□□□ -0.3
USP10-217ENST00000569925 PLPPR3Q6T4P5 718 aa13.17□□□□□ -0.3
USP10-217ENST00000569925 THOC2Q8NI27 1593 aaKnown RBP13.13□□□□□ -0.31
USP10-217ENST00000569925 ATAD2BQ9ULI0 1458 aa13.07□□□□□ -0.32
USP10-217ENST00000569925 PIAS4Q8N2W9 510 aaPredicted RBP13.02□□□□□ -0.33
USP10-217ENST00000569925 HMGXB3Q12766 1538 aa13□□□□□ -0.33
USP10-217ENST00000569925 OSCARQ8IYS5 282 aa12.98□□□□□ -0.33
USP10-217ENST00000569925 PPP6R1Q9UPN7 881 aa12.98□□□□□ -0.33
USP10-217ENST00000569925 SMARCA2P51531 1590 aa12.97□□□□□ -0.33
USP10-217ENST00000569925 LAMC3Q9Y6N6 1575 aa12.97□□□□□ -0.33
USP10-217ENST00000569925 KIF21AQ7Z4S6 1674 aa12.95□□□□□ -0.34
USP10-217ENST00000569925 PDS5BQ9NTI5 1447 aa12.93□□□□□ -0.34
USP10-217ENST00000569925 BAZ1AQ9NRL2 1556 aaPredicted RBP12.89□□□□□ -0.35
USP10-217ENST00000569925 ADRA2BP18089 450 aa12.88□□□□□ -0.35
USP10-217ENST00000569925 BAZ1BQ9UIG0 1483 aaKnown RBP12.86□□□□□ -0.35
USP10-217ENST00000569925 SMARCA4P51532 1647 aa12.86□□□□□ -0.35
USP10-217ENST00000569925 MRC2Q9UBG0 1479 aa12.83□□□□□ -0.36
USP10-217ENST00000569925 WDR62O43379 1518 aa12.82□□□□□ -0.36
USP10-217ENST00000569925 RIMBP3CA6NJZ7 1639 aa12.8□□□□□ -0.36
USP10-217ENST00000569925 RIMBP3BA6NNM3 1639 aa12.8□□□□□ -0.36
USP10-217ENST00000569925 RIMBP3Q9UFD9 1639 aa12.8□□□□□ -0.36
USP10-217ENST00000569925 CADPSQ9ULU8 1353 aa12.79□□□□□ -0.36
USP10-217ENST00000569925 PEG3Q9GZU2 1588 aa12.77□□□□□ -0.37
USP10-217ENST00000569925 TRHP20396 242 aaPredicted RBP12.72□□□□□ -0.37
USP10-217ENST00000569925 CYB5RLQ6IPT4 315 aa12.71□□□□□ -0.37
USP10-217ENST00000569925 ARHGEF11O15085 1522 aa12.7□□□□□ -0.38
USP10-217ENST00000569925 CEP164Q9UPV0 1460 aa12.64□□□□□ -0.39
USP10-217ENST00000569925 MROH2BQ7Z745 1585 aa12.61□□□□□ -0.39
USP10-217ENST00000569925 FANCD2Q9BXW9 1451 aa12.59□□□□□ -0.39
USP10-217ENST00000569925 URB2Q14146 1524 aaKnown RBP12.55□□□□□ -0.4
USP10-217ENST00000569925 ARAP1Q96P48 1450 aa12.54□□□□□ -0.4
USP10-217ENST00000569925 CFTRP13569 1480 aa12.5□□□□□ -0.41
USP10-217ENST00000569925 ZNF608Q9ULD9 1512 aaPredicted RBP12.5□□□□□ -0.41
USP10-217ENST00000569925 IFT140Q96RY7 1462 aa12.43□□□□□ -0.42
USP10-217ENST00000569925 RSF1Q96T23 1441 aaPredicted RBP12.43□□□□□ -0.42
USP10-217ENST00000569925 WIZO95785 1651 aa12.41□□□□□ -0.42
USP10-217ENST00000569925 ILDR1Q86SU0 546 aaPredicted RBP12.4□□□□□ -0.42
USP10-217ENST00000569925 CHD1O14646 1710 aa12.37□□□□□ -0.43
USP10-217ENST00000569925 FBLN2P98095 1184 aa12.35□□□□□ -0.43
USP10-217ENST00000569925 EIF4G3O43432 1585 aaKnown RBP12.34□□□□□ -0.43
USP10-217ENST00000569925 AQRO60306 1485 aaKnown RBP eCLIP12.33□□□□□ -0.445e-7■■■■□ 24.8
USP10-217ENST00000569925 TOPBP1Q92547 1522 aa12.3□□□□□ -0.44
USP10-217ENST00000569925 PRDM2Q13029 1718 aa12.24□□□□□ -0.45
USP10-217ENST00000569925 TARBP1Q13395 1621 aaKnown RBP12.24□□□□□ -0.45
USP10-217ENST00000569925 CLASP1Q7Z460 1538 aa12.24□□□□□ -0.45
USP10-217ENST00000569925 ABCC8Q09428 1581 aa12.23□□□□□ -0.45
USP10-217ENST00000569925 TOP2AP11388 1531 aaKnown RBP12.17□□□□□ -0.46
USP10-217ENST00000569925 GAPVD1Q14C86 1478 aa12.17□□□□□ -0.46
USP10-217ENST00000569925 CHMP7Q8WUX9 453 aaPredicted RBP12.17□□□□□ -0.46
USP10-217ENST00000569925 DNMBPQ6XZF7 1577 aa12.17□□□□□ -0.46
USP10-217ENST00000569925 KDM4FA0A1W2PPD8 638 aa12.16□□□□□ -0.46
USP10-217ENST00000569925 TDRD9Q8NDG6 1382 aaKnown RBP12.16□□□□□ -0.46
USP10-217ENST00000569925 SYNJ1O43426 1573 aa12.14□□□□□ -0.47
USP10-217ENST00000569925 POLA1P09884 1462 aaPredicted RBP12.14□□□□□ -0.47
USP10-217ENST00000569925 SNAPC4Q5SXM2 1469 aa12.12□□□□□ -0.47
USP10-217ENST00000569925 RAD54L2Q9Y4B4 1467 aa12.11□□□□□ -0.47
USP10-217ENST00000569925 CCDC88BA6NC98 1476 aa12.1□□□□□ -0.47
USP10-217ENST00000569925 SOGA1O94964 1423 aa12.1□□□□□ -0.47
USP10-217ENST00000569925 MAGI1Q96QZ7 1491 aaPredicted RBP12.08□□□□□ -0.48
USP10-217ENST00000569925 KIF13AQ9H1H9 1805 aa12.07□□□□□ -0.48
USP10-217ENST00000569925 SYNJ2O15056 1496 aa12.06□□□□□ -0.48
USP10-217ENST00000569925 ERCC6L2Q5T890 1561 aa12.03□□□□□ -0.48
USP10-217ENST00000569925 WDR97A6NE52 1622 aa12.03□□□□□ -0.48
USP10-217ENST00000569925 GRIN2BQ13224 1484 aa12.02□□□□□ -0.48
USP10-217ENST00000569925 MAPK8IP2Q13387 824 aaPredicted RBP11.98□□□□□ -0.49
USP10-217ENST00000569925 FAM69CQ0P6D2 419 aa11.97□□□□□ -0.49
USP10-217ENST00000569925 FGD5Q6ZNL6 1462 aa11.95□□□□□ -0.5
USP10-217ENST00000569925 ABCC10Q5T3U5 1492 aa11.93□□□□□ -0.5
USP10-217ENST00000569925 CEP170Q5SW79 1584 aa11.92□□□□□ -0.5
USP10-217ENST00000569925 PBRM1Q86U86 1689 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms