RNA–Protein interactions for RNA: ENST00000567201.5

GGA2-209, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, humanhuman

TSL 4

Gene GGA2, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA2-209ENST00000567201 CHIC1Q5VXU3 224 aa15.73■□□□□ 0.11
GGA2-209ENST00000567201 NISCHQ9Y2I1 1504 aa15.29■□□□□ 0.04
GGA2-209ENST00000567201 AEBP2Q6ZN18 517 aaPredicted RBP15.16■□□□□ 0.02
GGA2-209ENST00000567201 PHF23Q9BUL5 403 aaPredicted RBP13.92□□□□□ -0.18
GGA2-209ENST00000567201 CCDC180Q9P1Z9 1646 aa13.79□□□□□ -0.2
GGA2-209ENST00000567201 ABCC9O60706 1549 aa13.72□□□□□ -0.21
GGA2-209ENST00000567201 PLPPR3Q6T4P5 718 aa13.2□□□□□ -0.3
GGA2-209ENST00000567201 RB1CC1Q8TDY2 1594 aa13.15□□□□□ -0.3
GGA2-209ENST00000567201 NACADO15069 1562 aa13.08□□□□□ -0.32
GGA2-209ENST00000567201 MYO15BQ96JP2 1530 aa12.98□□□□□ -0.33
GGA2-209ENST00000567201 DNAJC5BQ9UF47 199 aa12.86□□□□□ -0.35
GGA2-209ENST00000567201 EHMT2Q96KQ7 1210 aa12.83□□□□□ -0.36
GGA2-209ENST00000567201 DCAF8L2P0C7V8 631 aa12.78□□□□□ -0.36
GGA2-209ENST00000567201 SENP3Q9H4L4 574 aaPredicted RBP12.76□□□□□ -0.37
GGA2-209ENST00000567201 SHROOM4Q9ULL8 1493 aa12.76□□□□□ -0.37
GGA2-209ENST00000567201 DCAF1Q9Y4B6 1507 aa12.74□□□□□ -0.37
GGA2-209ENST00000567201 PABPN1Q86U42 306 aaKnown RBP eCLIP12.71□□□□□ -0.37
GGA2-209ENST00000567201 ZCCHC6Q5VYS8 1495 aaKnown RBP12.69□□□□□ -0.38
GGA2-209ENST00000567201 BICRAQ9NZM4 1560 aa12.68□□□□□ -0.38
GGA2-209ENST00000567201 UNC13AQ9UPW8 1703 aa12.66□□□□□ -0.38
GGA2-209ENST00000567201 KCNA4P22459 653 aa12.51□□□□□ -0.41
GGA2-209ENST00000567201 CECR2Q9BXF3 1484 aa12.43□□□□□ -0.42
GGA2-209ENST00000567201 SCRIBQ14160 1630 aa12.42□□□□□ -0.42
GGA2-209ENST00000567201 EIF4G1Q04637 1599 aaKnown RBP12.42□□□□□ -0.42
GGA2-209ENST00000567201 CC2D2AQ9P2K1 1620 aa12.41□□□□□ -0.42
GGA2-209ENST00000567201 ADRA2BP18089 450 aa12.32□□□□□ -0.44
GGA2-209ENST00000567201 CSRNP3Q8WYN3 585 aa12.22□□□□□ -0.45
GGA2-209ENST00000567201 SLC4A1APQ9BWU0 796 aaKnown RBP12.11□□□□□ -0.47
GGA2-209ENST00000567201 NCAPD3P42695 1498 aa12.07□□□□□ -0.48
GGA2-209ENST00000567201 SLC24A1O60721 1099 aa12.06□□□□□ -0.48
GGA2-209ENST00000567201 DNAJC5Q9H3Z4 198 aa12.01□□□□□ -0.49
GGA2-209ENST00000567201 CUX2O14529 1486 aa12.01□□□□□ -0.49
GGA2-209ENST00000567201 PPP6R1Q9UPN7 881 aa11.99□□□□□ -0.49
GGA2-209ENST00000567201 HMGXB3Q12766 1538 aa11.99□□□□□ -0.49
GGA2-209ENST00000567201 SMARCA2P51531 1590 aa11.99□□□□□ -0.49
GGA2-209ENST00000567201 ATAD2BQ9ULI0 1458 aa11.97□□□□□ -0.49
GGA2-209ENST00000567201 ERCC6Q03468 1493 aa11.92□□□□□ -0.5
GGA2-209ENST00000567201 SMARCA4P51532 1647 aa11.92□□□□□ -0.5
GGA2-209ENST00000567201 BAZ1AQ9NRL2 1556 aaPredicted RBP11.92□□□□□ -0.5
GGA2-209ENST00000567201 PEG3Q9GZU2 1588 aa11.89□□□□□ -0.51
GGA2-209ENST00000567201 BAZ1BQ9UIG0 1483 aaKnown RBP11.86□□□□□ -0.51
GGA2-209ENST00000567201 LAMC3Q9Y6N6 1575 aa11.79□□□□□ -0.52
GGA2-209ENST00000567201 PPP4R3CPQ6ZMV5 832 aa11.75□□□□□ -0.53
GGA2-209ENST00000567201 PDS5BQ9NTI5 1447 aa11.75□□□□□ -0.53
GGA2-209ENST00000567201 NCBP3Q53F19 620 aaKnown RBP11.74□□□□□ -0.53
GGA2-209ENST00000567201 NESP48681 1621 aa11.73□□□□□ -0.53
GGA2-209ENST00000567201 MROH2BQ7Z745 1585 aa11.71□□□□□ -0.53
GGA2-209ENST00000567201 FOXD1Q16676 465 aa11.71□□□□□ -0.53
GGA2-209ENST00000567201 THOC2Q8NI27 1593 aaKnown RBP11.71□□□□□ -0.54
GGA2-209ENST00000567201 CADPSQ9ULU8 1353 aa11.67□□□□□ -0.54
GGA2-209ENST00000567201 AMER1Q5JTC6 1135 aaPredicted RBP11.67□□□□□ -0.54
GGA2-209ENST00000567201 RTN4Q9NQC3 1192 aaKnown RBP11.66□□□□□ -0.54
GGA2-209ENST00000567201 MRC2Q9UBG0 1479 aa11.61□□□□□ -0.55
GGA2-209ENST00000567201 WDR62O43379 1518 aa11.59□□□□□ -0.55
GGA2-209ENST00000567201 KIF21AQ7Z4S6 1674 aa11.58□□□□□ -0.56
GGA2-209ENST00000567201 CEP164Q9UPV0 1460 aa11.55□□□□□ -0.56
GGA2-209ENST00000567201 CFTRP13569 1480 aa11.54□□□□□ -0.56
GGA2-209ENST00000567201 NPM3O75607 178 aaKnown RBP11.53□□□□□ -0.56
GGA2-209ENST00000567201 WIZO95785 1651 aa11.52□□□□□ -0.57
GGA2-209ENST00000567201 FANCD2Q9BXW9 1451 aa11.51□□□□□ -0.57
GGA2-209ENST00000567201 ZBTB22O15209 634 aa11.51□□□□□ -0.57
GGA2-209ENST00000567201 TOP2AP11388 1531 aaKnown RBP11.5□□□□□ -0.57
GGA2-209ENST00000567201 RSF1Q96T23 1441 aaPredicted RBP11.49□□□□□ -0.57
GGA2-209ENST00000567201 OSCARQ8IYS5 282 aa11.38□□□□□ -0.59
GGA2-209ENST00000567201 URB2Q14146 1524 aaKnown RBP11.38□□□□□ -0.59
GGA2-209ENST00000567201 IFT140Q96RY7 1462 aa11.36□□□□□ -0.59
GGA2-209ENST00000567201 ABCC8Q09428 1581 aa11.36□□□□□ -0.59
GGA2-209ENST00000567201 PRDM2Q13029 1718 aa11.33□□□□□ -0.6
GGA2-209ENST00000567201 TRIM41Q8WV44 630 aa11.32□□□□□ -0.6
GGA2-209ENST00000567201 CCDC88BA6NC98 1476 aa11.32□□□□□ -0.6
GGA2-209ENST00000567201 PIAS4Q8N2W9 510 aaPredicted RBP11.29□□□□□ -0.6
GGA2-209ENST00000567201 TOPBP1Q92547 1522 aa11.28□□□□□ -0.6
GGA2-209ENST00000567201 FOXD4L1Q9NU39 408 aa11.26□□□□□ -0.61
GGA2-209ENST00000567201 DNMBPQ6XZF7 1577 aa11.25□□□□□ -0.61
GGA2-209ENST00000567201 ZNF608Q9ULD9 1512 aaPredicted RBP11.22□□□□□ -0.61
GGA2-209ENST00000567201 CNKSR2Q8WXI2 1034 aa11.21□□□□□ -0.61
GGA2-209ENST00000567201 WDR97A6NE52 1622 aa11.2□□□□□ -0.62
GGA2-209ENST00000567201 EIF4G3O43432 1585 aaKnown RBP11.19□□□□□ -0.62
GGA2-209ENST00000567201 ARHGEF11O15085 1522 aa11.18□□□□□ -0.62
GGA2-209ENST00000567201 RIMBP3CA6NJZ7 1639 aa11.17□□□□□ -0.62
GGA2-209ENST00000567201 RIMBP3BA6NNM3 1639 aa11.17□□□□□ -0.62
GGA2-209ENST00000567201 TARBP1Q13395 1621 aaKnown RBP11.17□□□□□ -0.62
GGA2-209ENST00000567201 RIMBP3Q9UFD9 1639 aa11.17□□□□□ -0.62
GGA2-209ENST00000567201 POLA1P09884 1462 aaPredicted RBP11.16□□□□□ -0.62
GGA2-209ENST00000567201 AQRO60306 1485 aaKnown RBP eCLIP11.12□□□□□ -0.639e-8■■■■□ 23.8
GGA2-209ENST00000567201 SOGA1O94964 1423 aa11.1□□□□□ -0.63
GGA2-209ENST00000567201 MAGI1Q96QZ7 1491 aaPredicted RBP11.1□□□□□ -0.63
GGA2-209ENST00000567201 GRIN2BQ13224 1484 aa11.06□□□□□ -0.64
GGA2-209ENST00000567201 FGD5Q6ZNL6 1462 aa11.06□□□□□ -0.64
GGA2-209ENST00000567201 SCAF1Q9H7N4 1312 aaKnown RBP11.06□□□□□ -0.64
GGA2-209ENST00000567201 ARAP1Q96P48 1450 aa11.05□□□□□ -0.64
GGA2-209ENST00000567201 RAD54L2Q9Y4B4 1467 aa11.05□□□□□ -0.64
GGA2-209ENST00000567201 CHD1O14646 1710 aa11.04□□□□□ -0.64
GGA2-209ENST00000567201 SYNJ1O43426 1573 aa11.04□□□□□ -0.64
GGA2-209ENST00000567201 CYB5RLQ6IPT4 315 aa11.04□□□□□ -0.64
GGA2-209ENST00000567201 SNAPC4Q5SXM2 1469 aa11.04□□□□□ -0.64
GGA2-209ENST00000567201 TDRD9Q8NDG6 1382 aaKnown RBP11.03□□□□□ -0.64
GGA2-209ENST00000567201 FBLN2P98095 1184 aa11.03□□□□□ -0.64
GGA2-209ENST00000567201 SYNJ2O15056 1496 aa11.03□□□□□ -0.64
GGA2-209ENST00000567201 CLASP1Q7Z460 1538 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms