RNA–Protein interactions for RNA: ENST00000565344.1

EARS2-216, Transcript of glutamyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene EARS2, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EARS2-216ENST00000565344 NISCHQ9Y2I1 1504 aa26.49■■□□□ 1.83
EARS2-216ENST00000565344 ABCC9O60706 1549 aa24.6■■□□□ 1.53
EARS2-216ENST00000565344 CCDC180Q9P1Z9 1646 aa23.97■■□□□ 1.43
EARS2-216ENST00000565344 DNAJC5BQ9UF47 199 aa23.8■■□□□ 1.4
EARS2-216ENST00000565344 RB1CC1Q8TDY2 1594 aa23.1■■□□□ 1.29
EARS2-216ENST00000565344 PABPN1Q86U42 306 aaKnown RBP eCLIP22.83■■□□□ 1.25
EARS2-216ENST00000565344 NACADO15069 1562 aa22.82■■□□□ 1.24
EARS2-216ENST00000565344 UNC13AQ9UPW8 1703 aa22.66■■□□□ 1.22
EARS2-216ENST00000565344 BICRAQ9NZM4 1560 aa22.59■■□□□ 1.21
EARS2-216ENST00000565344 DCAF8L2P0C7V8 631 aa22.51■■□□□ 1.19
EARS2-216ENST00000565344 MYO15BQ96JP2 1530 aa22.36■■□□□ 1.17
EARS2-216ENST00000565344 DNAJC5Q9H3Z4 198 aa22.22■■□□□ 1.15
EARS2-216ENST00000565344 CECR2Q9BXF3 1484 aa22.22■■□□□ 1.15
EARS2-216ENST00000565344 CC2D2AQ9P2K1 1620 aa22.2■■□□□ 1.15
EARS2-216ENST00000565344 SHROOM4Q9ULL8 1493 aa22.09■■□□□ 1.13
EARS2-216ENST00000565344 EIF4G1Q04637 1599 aaKnown RBP22■■□□□ 1.11
EARS2-216ENST00000565344 DCAF1Q9Y4B6 1507 aa21.84■■□□□ 1.09
EARS2-216ENST00000565344 ZCCHC6Q5VYS8 1495 aaKnown RBP21.81■■□□□ 1.08
EARS2-216ENST00000565344 SCRIBQ14160 1630 aa21.79■■□□□ 1.08
EARS2-216ENST00000565344 CUX2O14529 1486 aa21.43■■□□□ 1.02
EARS2-216ENST00000565344 ERCC6Q03468 1493 aa21.19■□□□□ 0.98
EARS2-216ENST00000565344 NCAPD3P42695 1498 aa21.14■□□□□ 0.98
EARS2-216ENST00000565344 NESP48681 1621 aa21.01■□□□□ 0.95
EARS2-216ENST00000565344 ATAD2BQ9ULI0 1458 aa20.97■□□□□ 0.95
EARS2-216ENST00000565344 THOC2Q8NI27 1593 aaKnown RBP20.89■□□□□ 0.93
EARS2-216ENST00000565344 HMGXB3Q12766 1538 aa20.87■□□□□ 0.93
EARS2-216ENST00000565344 TRIM41Q8WV44 630 aa20.85■□□□□ 0.93
EARS2-216ENST00000565344 SMARCA2P51531 1590 aa20.8■□□□□ 0.92
EARS2-216ENST00000565344 SMARCA4P51532 1647 aa20.77■□□□□ 0.92
EARS2-216ENST00000565344 LAMC3Q9Y6N6 1575 aa20.68■□□□□ 0.9
EARS2-216ENST00000565344 KIF21AQ7Z4S6 1674 aa20.66■□□□□ 0.9
EARS2-216ENST00000565344 BAZ1BQ9UIG0 1483 aaKnown RBP20.65■□□□□ 0.9
EARS2-216ENST00000565344 PEG3Q9GZU2 1588 aa20.61■□□□□ 0.89
EARS2-216ENST00000565344 PDS5BQ9NTI5 1447 aa20.57■□□□□ 0.88
EARS2-216ENST00000565344 BAZ1AQ9NRL2 1556 aaPredicted RBP20.53■□□□□ 0.88
EARS2-216ENST00000565344 MRC2Q9UBG0 1479 aa20.45■□□□□ 0.86
EARS2-216ENST00000565344 WDR62O43379 1518 aa20.45■□□□□ 0.86
EARS2-216ENST00000565344 CADPSQ9ULU8 1353 aa20.44■□□□□ 0.86
EARS2-216ENST00000565344 MROH2BQ7Z745 1585 aa20.42■□□□□ 0.86
EARS2-216ENST00000565344 OSCARQ8IYS5 282 aa20.36■□□□□ 0.85
EARS2-216ENST00000565344 CEP164Q9UPV0 1460 aa20.22■□□□□ 0.83
EARS2-216ENST00000565344 RIMBP3CA6NJZ7 1639 aa20.18■□□□□ 0.82
EARS2-216ENST00000565344 RIMBP3BA6NNM3 1639 aa20.18■□□□□ 0.82
EARS2-216ENST00000565344 RIMBP3Q9UFD9 1639 aa20.18■□□□□ 0.82
EARS2-216ENST00000565344 FANCD2Q9BXW9 1451 aa20.18■□□□□ 0.82
EARS2-216ENST00000565344 WIZO95785 1651 aa20.13■□□□□ 0.81
EARS2-216ENST00000565344 URB2Q14146 1524 aaKnown RBP20.11■□□□□ 0.81
EARS2-216ENST00000565344 CFTRP13569 1480 aa20.1■□□□□ 0.81
EARS2-216ENST00000565344 ARHGEF11O15085 1522 aa20.05■□□□□ 0.8
EARS2-216ENST00000565344 ZNF608Q9ULD9 1512 aaPredicted RBP19.97■□□□□ 0.79
EARS2-216ENST00000565344 CYB5RLQ6IPT4 315 aa19.93■□□□□ 0.78
EARS2-216ENST00000565344 IFT140Q96RY7 1462 aa19.86■□□□□ 0.77
EARS2-216ENST00000565344 ARAP1Q96P48 1450 aa19.84■□□□□ 0.77
EARS2-216ENST00000565344 TRHP20396 242 aaPredicted RBP19.82■□□□□ 0.76
EARS2-216ENST00000565344 RSF1Q96T23 1441 aaPredicted RBP19.8■□□□□ 0.76
EARS2-216ENST00000565344 TOP2AP11388 1531 aaKnown RBP19.78■□□□□ 0.76
EARS2-216ENST00000565344 PRDM2Q13029 1718 aa19.76■□□□□ 0.75
EARS2-216ENST00000565344 TOPBP1Q92547 1522 aa19.75■□□□□ 0.75
EARS2-216ENST00000565344 EIF4G3O43432 1585 aaKnown RBP19.74■□□□□ 0.75
EARS2-216ENST00000565344 CHD1O14646 1710 aa19.73■□□□□ 0.75
EARS2-216ENST00000565344 AQRO60306 1485 aaKnown RBP eCLIP19.69■□□□□ 0.748e-7■■■■■ 28.7
EARS2-216ENST00000565344 TARBP1Q13395 1621 aaKnown RBP19.65■□□□□ 0.74
EARS2-216ENST00000565344 AEBP2Q6ZN18 517 aaPredicted RBP19.65■□□□□ 0.74
EARS2-216ENST00000565344 CCDC88BA6NC98 1476 aa19.62■□□□□ 0.73
EARS2-216ENST00000565344 ABCC8Q09428 1581 aa19.6■□□□□ 0.73
EARS2-216ENST00000565344 DNMBPQ6XZF7 1577 aa19.59■□□□□ 0.73
EARS2-216ENST00000565344 FBLN2P98095 1184 aa19.57■□□□□ 0.72
EARS2-216ENST00000565344 CLASP1Q7Z460 1538 aa19.54■□□□□ 0.72
EARS2-216ENST00000565344 POLA1P09884 1462 aaPredicted RBP19.51■□□□□ 0.71
EARS2-216ENST00000565344 SUPT5HO00267 1087 aaKnown RBP19.48■□□□□ 0.71
EARS2-216ENST00000565344 RAD54L2Q9Y4B4 1467 aa19.47■□□□□ 0.71
EARS2-216ENST00000565344 TDRD9Q8NDG6 1382 aaKnown RBP19.45■□□□□ 0.7
EARS2-216ENST00000565344 SNAPC4Q5SXM2 1469 aa19.42■□□□□ 0.7
EARS2-216ENST00000565344 SOGA1O94964 1423 aa19.4■□□□□ 0.7
EARS2-216ENST00000565344 SYNJ1O43426 1573 aa19.36■□□□□ 0.69
EARS2-216ENST00000565344 CHMP7Q8WUX9 453 aaPredicted RBP19.35■□□□□ 0.69
EARS2-216ENST00000565344 GAPVD1Q14C86 1478 aa19.33■□□□□ 0.68
EARS2-216ENST00000565344 MAGI1Q96QZ7 1491 aaPredicted RBP19.33■□□□□ 0.68
EARS2-216ENST00000565344 WDR97A6NE52 1622 aa19.32■□□□□ 0.68
EARS2-216ENST00000565344 SYNJ2O15056 1496 aa19.29■□□□□ 0.68
EARS2-216ENST00000565344 FGD5Q6ZNL6 1462 aa19.28■□□□□ 0.68
EARS2-216ENST00000565344 GRIN2BQ13224 1484 aa19.28■□□□□ 0.68
EARS2-216ENST00000565344 ERCC6L2Q5T890 1561 aa19.23■□□□□ 0.67
EARS2-216ENST00000565344 CUX1P39880 1505 aa19.2■□□□□ 0.66
EARS2-216ENST00000565344 PBRM1Q86U86 1689 aa19.14■□□□□ 0.65
EARS2-216ENST00000565344 KIF13AQ9H1H9 1805 aa19.11■□□□□ 0.65
EARS2-216ENST00000565344 ABCA5Q8WWZ7 1642 aa19.07■□□□□ 0.64
EARS2-216ENST00000565344 CEP170Q5SW79 1584 aa19.07■□□□□ 0.64
EARS2-216ENST00000565344 NUP160Q12769 1436 aa19.05■□□□□ 0.64
EARS2-216ENST00000565344 GRIN2AQ12879 1464 aa19.04■□□□□ 0.64
EARS2-216ENST00000565344 ABCA10Q8WWZ4 1543 aa19.04■□□□□ 0.64
EARS2-216ENST00000565344 SHROOM2Q13796 1616 aa19.03■□□□□ 0.64
EARS2-216ENST00000565344 ILDR1Q86SU0 546 aaPredicted RBP19.02■□□□□ 0.64
EARS2-216ENST00000565344 KDM4FA0A1W2PPD8 638 aa19.01■□□□□ 0.63
EARS2-216ENST00000565344 ADAMTS12P58397 1594 aa18.94■□□□□ 0.62
EARS2-216ENST00000565344 ABCC10Q5T3U5 1492 aa18.92■□□□□ 0.62
EARS2-216ENST00000565344 FAM69CQ0P6D2 419 aa18.89■□□□□ 0.61
EARS2-216ENST00000565344 FHAD1B1AJZ9 1412 aa18.86■□□□□ 0.61
EARS2-216ENST00000565344 PRG4Q92954 1404 aaPredicted RBP18.86■□□□□ 0.61
EARS2-216ENST00000565344 DIP2BQ9P265 1576 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms