RNA–Protein interactions for RNA: ENST00000564342.5

NSMCE1-207, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-207ENST00000564342 AEBP2Q6ZN18 517 aaPredicted RBP22.26■■□□□ 1.15
NSMCE1-207ENST00000564342 CHIC1Q5VXU3 224 aa20.93■□□□□ 0.94
NSMCE1-207ENST00000564342 NISCHQ9Y2I1 1504 aa20.28■□□□□ 0.84
NSMCE1-207ENST00000564342 SENP3Q9H4L4 574 aaPredicted RBP19.27■□□□□ 0.68
NSMCE1-207ENST00000564342 PHF23Q9BUL5 403 aaPredicted RBP18.82■□□□□ 0.6
NSMCE1-207ENST00000564342 POTEDQ86YR6 584 aa18.46■□□□□ 0.55
NSMCE1-207ENST00000564342 CCDC180Q9P1Z9 1646 aa18.12■□□□□ 0.49
NSMCE1-207ENST00000564342 FOXD1Q16676 465 aa17.99■□□□□ 0.47
NSMCE1-207ENST00000564342 ABCC9O60706 1549 aa17.77■□□□□ 0.43
NSMCE1-207ENST00000564342 MSH5O43196 834 aa17.31■□□□□ 0.36
NSMCE1-207ENST00000564342 RB1CC1Q8TDY2 1594 aa17.06■□□□□ 0.32
NSMCE1-207ENST00000564342 NACADO15069 1562 aa17.02■□□□□ 0.32
NSMCE1-207ENST00000564342 DCAF8L2P0C7V8 631 aa16.89■□□□□ 0.29
NSMCE1-207ENST00000564342 MYO15BQ96JP2 1530 aa16.89■□□□□ 0.29
NSMCE1-207ENST00000564342 ZCCHC6Q5VYS8 1495 aaKnown RBP16.88■□□□□ 0.29
NSMCE1-207ENST00000564342 DCAF1Q9Y4B6 1507 aa16.79■□□□□ 0.28
NSMCE1-207ENST00000564342 UNC13AQ9UPW8 1703 aa16.76■□□□□ 0.27
NSMCE1-207ENST00000564342 PIAS4Q8N2W9 510 aaPredicted RBP16.65■□□□□ 0.26
NSMCE1-207ENST00000564342 BICRAQ9NZM4 1560 aa16.59■□□□□ 0.25
NSMCE1-207ENST00000564342 PABPN1Q86U42 306 aaKnown RBP eCLIP16.54■□□□□ 0.24
NSMCE1-207ENST00000564342 SCRIBQ14160 1630 aa16.49■□□□□ 0.23
NSMCE1-207ENST00000564342 DNAJC5BQ9UF47 199 aa16.38■□□□□ 0.21
NSMCE1-207ENST00000564342 SHROOM4Q9ULL8 1493 aa16.36■□□□□ 0.21
NSMCE1-207ENST00000564342 EIF4G1Q04637 1599 aaKnown RBP16.13■□□□□ 0.17
NSMCE1-207ENST00000564342 CC2D2AQ9P2K1 1620 aa16.1■□□□□ 0.17
NSMCE1-207ENST00000564342 PPP6R1Q9UPN7 881 aa16.02■□□□□ 0.16
NSMCE1-207ENST00000564342 CECR2Q9BXF3 1484 aa15.97■□□□□ 0.15
NSMCE1-207ENST00000564342 ADRA2BP18089 450 aa15.96■□□□□ 0.15
NSMCE1-207ENST00000564342 PLPPR3Q6T4P5 718 aa15.8■□□□□ 0.12
NSMCE1-207ENST00000564342 SMARCA4P51532 1647 aa15.78■□□□□ 0.12
NSMCE1-207ENST00000564342 BAZ1AQ9NRL2 1556 aaPredicted RBP15.73■□□□□ 0.11
NSMCE1-207ENST00000564342 NCAPD3P42695 1498 aa15.69■□□□□ 0.1
NSMCE1-207ENST00000564342 ATAD2BQ9ULI0 1458 aa15.69■□□□□ 0.1
NSMCE1-207ENST00000564342 SMARCA2P51531 1590 aa15.66■□□□□ 0.1
NSMCE1-207ENST00000564342 MROH2BQ7Z745 1585 aa15.63■□□□□ 0.09
NSMCE1-207ENST00000564342 PEG3Q9GZU2 1588 aa15.63■□□□□ 0.09
NSMCE1-207ENST00000564342 HMGXB3Q12766 1538 aa15.63■□□□□ 0.09
NSMCE1-207ENST00000564342 BAZ1BQ9UIG0 1483 aaKnown RBP15.54■□□□□ 0.08
NSMCE1-207ENST00000564342 WIZO95785 1651 aa15.48■□□□□ 0.07
NSMCE1-207ENST00000564342 CACNB1Q02641 598 aaPredicted RBP15.44■□□□□ 0.06
NSMCE1-207ENST00000564342 RSF1Q96T23 1441 aaPredicted RBP15.39■□□□□ 0.05
NSMCE1-207ENST00000564342 NESP48681 1621 aa15.35■□□□□ 0.05
NSMCE1-207ENST00000564342 LAMC3Q9Y6N6 1575 aa15.32■□□□□ 0.04
NSMCE1-207ENST00000564342 TOP2AP11388 1531 aaKnown RBP15.29■□□□□ 0.04
NSMCE1-207ENST00000564342 ERCC6Q03468 1493 aa15.29■□□□□ 0.04
NSMCE1-207ENST00000564342 KIF21AQ7Z4S6 1674 aa15.22■□□□□ 0.03
NSMCE1-207ENST00000564342 CADPSQ9ULU8 1353 aa15.21■□□□□ 0.02
NSMCE1-207ENST00000564342 CUX2O14529 1486 aa15.2■□□□□ 0.02
NSMCE1-207ENST00000564342 THOC2Q8NI27 1593 aaKnown RBP15.19■□□□□ 0.02
NSMCE1-207ENST00000564342 PDS5BQ9NTI5 1447 aa15.17■□□□□ 0.02
NSMCE1-207ENST00000564342 CFTRP13569 1480 aa15.12■□□□□ 0.01
NSMCE1-207ENST00000564342 CCDC88BA6NC98 1476 aa15.09■□□□□ 0.01
NSMCE1-207ENST00000564342 DMRT2Q9Y5R5 561 aa15.09■□□□□ 0.01
NSMCE1-207ENST00000564342 PRDM2Q13029 1718 aa15.08■□□□□ 0
NSMCE1-207ENST00000564342 FANCD2Q9BXW9 1451 aa15.05■□□□□ -0
NSMCE1-207ENST00000564342 MRC2Q9UBG0 1479 aa15.04■□□□□ -0
NSMCE1-207ENST00000564342 CEP164Q9UPV0 1460 aa15.04■□□□□ -0
NSMCE1-207ENST00000564342 WDR62O43379 1518 aa15.02■□□□□ -0
NSMCE1-207ENST00000564342 URB2Q14146 1524 aaKnown RBP14.92□□□□□ -0.02
NSMCE1-207ENST00000564342 MAPK8IP2Q13387 824 aaPredicted RBP14.92□□□□□ -0.02
NSMCE1-207ENST00000564342 SUPT5HO00267 1087 aaKnown RBP14.87□□□□□ -0.03
NSMCE1-207ENST00000564342 TOPBP1Q92547 1522 aa14.82□□□□□ -0.04
NSMCE1-207ENST00000564342 DNAJC5Q9H3Z4 198 aa14.81□□□□□ -0.04
NSMCE1-207ENST00000564342 DNMBPQ6XZF7 1577 aa14.8□□□□□ -0.04
NSMCE1-207ENST00000564342 ABCC8Q09428 1581 aa14.78□□□□□ -0.04
NSMCE1-207ENST00000564342 SCAF1Q9H7N4 1312 aaKnown RBP14.73□□□□□ -0.05
NSMCE1-207ENST00000564342 IFT140Q96RY7 1462 aa14.72□□□□□ -0.05
NSMCE1-207ENST00000564342 TARBP1Q13395 1621 aaKnown RBP14.69□□□□□ -0.06
NSMCE1-207ENST00000564342 ZNF608Q9ULD9 1512 aaPredicted RBP14.68□□□□□ -0.06
NSMCE1-207ENST00000564342 POLA1P09884 1462 aaPredicted RBP14.68□□□□□ -0.06
NSMCE1-207ENST00000564342 CUX1P39880 1505 aa14.67□□□□□ -0.06
NSMCE1-207ENST00000564342 EIF4G3O43432 1585 aaKnown RBP14.65□□□□□ -0.06
NSMCE1-207ENST00000564342 FGD5Q6ZNL6 1462 aa14.63□□□□□ -0.07
NSMCE1-207ENST00000564342 RNF39Q9H2S5 420 aa14.62□□□□□ -0.07
NSMCE1-207ENST00000564342 RAD54L2Q9Y4B4 1467 aa14.61□□□□□ -0.07
NSMCE1-207ENST00000564342 SOGA1O94964 1423 aa14.58□□□□□ -0.07
NSMCE1-207ENST00000564342 DCAF8L1A6NGE4 600 aa14.58□□□□□ -0.08
NSMCE1-207ENST00000564342 WDR97A6NE52 1622 aa14.58□□□□□ -0.08
NSMCE1-207ENST00000564342 AQRO60306 1485 aaKnown RBP eCLIP14.57□□□□□ -0.08
NSMCE1-207ENST00000564342 BIVM-ERCC5R4GMW8 1640 aa14.55□□□□□ -0.08
NSMCE1-207ENST00000564342 TOP2BQ02880 1626 aa14.52□□□□□ -0.08
NSMCE1-207ENST00000564342 SYNJ1O43426 1573 aa14.52□□□□□ -0.08
NSMCE1-207ENST00000564342 WRNQ14191 1432 aaPredicted RBP eCLIP14.51□□□□□ -0.09
NSMCE1-207ENST00000564342 TDRD9Q8NDG6 1382 aaKnown RBP14.51□□□□□ -0.09
NSMCE1-207ENST00000564342 CHD1O14646 1710 aa14.51□□□□□ -0.09
NSMCE1-207ENST00000564342 OSCARQ8IYS5 282 aa14.49□□□□□ -0.09
NSMCE1-207ENST00000564342 ABCA10Q8WWZ4 1543 aa14.48□□□□□ -0.09
NSMCE1-207ENST00000564342 PBRM1Q86U86 1689 aa14.48□□□□□ -0.09
NSMCE1-207ENST00000564342 ABCA5Q8WWZ7 1642 aa14.47□□□□□ -0.09
NSMCE1-207ENST00000564342 GRIN2BQ13224 1484 aa14.44□□□□□ -0.1
NSMCE1-207ENST00000564342 SNAPC4Q5SXM2 1469 aa14.44□□□□□ -0.1
NSMCE1-207ENST00000564342 GAPVD1Q14C86 1478 aa14.43□□□□□ -0.1
NSMCE1-207ENST00000564342 MAGI1Q96QZ7 1491 aaPredicted RBP14.42□□□□□ -0.1
NSMCE1-207ENST00000564342 C1QBPQ07021 282 aaKnown RBP14.4□□□□□ -0.1
NSMCE1-207ENST00000564342 FBLN2P98095 1184 aa14.36□□□□□ -0.11
NSMCE1-207ENST00000564342 RIMBP3CA6NJZ7 1639 aa14.36□□□□□ -0.11
NSMCE1-207ENST00000564342 RIMBP3BA6NNM3 1639 aa14.36□□□□□ -0.11
NSMCE1-207ENST00000564342 RIMBP3Q9UFD9 1639 aa14.36□□□□□ -0.11
NSMCE1-207ENST00000564342 SYNJ2O15056 1496 aa14.36□□□□□ -0.11
NSMCE1-207ENST00000564342 ARHGEF11O15085 1522 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms