RNA–Protein interactions for RNA: ENST00000563678.1

CLUHP3-207, Transcript of clustered mitochondria homolog pseudogene 3, humanhuman

BASIC

Gene CLUHP3, Length 1,303 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLUHP3-207ENST00000563678 NISCHQ9Y2I1 1504 aa28.4■■■□□ 2.14
CLUHP3-207ENST00000563678 ABCC9O60706 1549 aa26.39■■□□□ 1.81
CLUHP3-207ENST00000563678 CCDC180Q9P1Z9 1646 aa25.78■■□□□ 1.72
CLUHP3-207ENST00000563678 DNAJC5BQ9UF47 199 aa25.32■■□□□ 1.64
CLUHP3-207ENST00000563678 RB1CC1Q8TDY2 1594 aa24.85■■□□□ 1.57
CLUHP3-207ENST00000563678 NACADO15069 1562 aa24.53■■□□□ 1.52
CLUHP3-207ENST00000563678 PABPN1Q86U42 306 aaKnown RBP eCLIP24.44■■□□□ 1.5
CLUHP3-207ENST00000563678 UNC13AQ9UPW8 1703 aa24.24■■□□□ 1.47
CLUHP3-207ENST00000563678 DCAF8L2P0C7V8 631 aa24.2■■□□□ 1.46
CLUHP3-207ENST00000563678 BICRAQ9NZM4 1560 aa24.13■■□□□ 1.45
CLUHP3-207ENST00000563678 MYO15BQ96JP2 1530 aa24■■□□□ 1.43
CLUHP3-207ENST00000563678 CECR2Q9BXF3 1484 aa23.86■■□□□ 1.41
CLUHP3-207ENST00000563678 SHROOM4Q9ULL8 1493 aa23.81■■□□□ 1.4
CLUHP3-207ENST00000563678 CC2D2AQ9P2K1 1620 aa23.81■■□□□ 1.4
CLUHP3-207ENST00000563678 DNAJC5Q9H3Z4 198 aa23.76■■□□□ 1.39
CLUHP3-207ENST00000563678 EIF4G1Q04637 1599 aaKnown RBP23.6■■□□□ 1.37
CLUHP3-207ENST00000563678 DCAF1Q9Y4B6 1507 aa23.44■■□□□ 1.34
CLUHP3-207ENST00000563678 SCRIBQ14160 1630 aa23.41■■□□□ 1.34
CLUHP3-207ENST00000563678 ZCCHC6Q5VYS8 1495 aaKnown RBP23.41■■□□□ 1.34
CLUHP3-207ENST00000563678 CUX2O14529 1486 aa23.06■■□□□ 1.28
CLUHP3-207ENST00000563678 ERCC6Q03468 1493 aa22.85■■□□□ 1.25
CLUHP3-207ENST00000563678 NCAPD3P42695 1498 aa22.66■■□□□ 1.22
CLUHP3-207ENST00000563678 ATAD2BQ9ULI0 1458 aa22.48■■□□□ 1.19
CLUHP3-207ENST00000563678 NESP48681 1621 aa22.47■■□□□ 1.19
CLUHP3-207ENST00000563678 HMGXB3Q12766 1538 aa22.44■■□□□ 1.18
CLUHP3-207ENST00000563678 TRIM41Q8WV44 630 aa22.42■■□□□ 1.18
CLUHP3-207ENST00000563678 SMARCA2P51531 1590 aa22.4■■□□□ 1.18
CLUHP3-207ENST00000563678 THOC2Q8NI27 1593 aaKnown RBP22.4■■□□□ 1.18
CLUHP3-207ENST00000563678 SMARCA4P51532 1647 aa22.29■■□□□ 1.16
CLUHP3-207ENST00000563678 LAMC3Q9Y6N6 1575 aa22.24■■□□□ 1.15
CLUHP3-207ENST00000563678 BAZ1BQ9UIG0 1483 aaKnown RBP22.23■■□□□ 1.15
CLUHP3-207ENST00000563678 KIF21AQ7Z4S6 1674 aa22.16■■□□□ 1.14
CLUHP3-207ENST00000563678 PDS5BQ9NTI5 1447 aa22.15■■□□□ 1.14
CLUHP3-207ENST00000563678 PEG3Q9GZU2 1588 aa22.1■■□□□ 1.13
CLUHP3-207ENST00000563678 BAZ1AQ9NRL2 1556 aaPredicted RBP22.09■■□□□ 1.13
CLUHP3-207ENST00000563678 MRC2Q9UBG0 1479 aa21.99■■□□□ 1.11
CLUHP3-207ENST00000563678 WDR62O43379 1518 aa21.96■■□□□ 1.11
CLUHP3-207ENST00000563678 CADPSQ9ULU8 1353 aa21.93■■□□□ 1.1
CLUHP3-207ENST00000563678 OSCARQ8IYS5 282 aa21.86■■□□□ 1.09
CLUHP3-207ENST00000563678 MROH2BQ7Z745 1585 aa21.86■■□□□ 1.09
CLUHP3-207ENST00000563678 CEP164Q9UPV0 1460 aa21.77■■□□□ 1.08
CLUHP3-207ENST00000563678 FANCD2Q9BXW9 1451 aa21.68■■□□□ 1.06
CLUHP3-207ENST00000563678 RIMBP3CA6NJZ7 1639 aa21.64■■□□□ 1.05
CLUHP3-207ENST00000563678 RIMBP3BA6NNM3 1639 aa21.64■■□□□ 1.05
CLUHP3-207ENST00000563678 RIMBP3Q9UFD9 1639 aa21.64■■□□□ 1.05
CLUHP3-207ENST00000563678 CFTRP13569 1480 aa21.55■■□□□ 1.04
CLUHP3-207ENST00000563678 WIZO95785 1651 aa21.54■■□□□ 1.04
CLUHP3-207ENST00000563678 URB2Q14146 1524 aaKnown RBP21.54■■□□□ 1.04
CLUHP3-207ENST00000563678 ARHGEF11O15085 1522 aa21.53■■□□□ 1.04
CLUHP3-207ENST00000563678 CYB5RLQ6IPT4 315 aa21.38■■□□□ 1.01
CLUHP3-207ENST00000563678 ZNF608Q9ULD9 1512 aaPredicted RBP21.37■■□□□ 1.01
CLUHP3-207ENST00000563678 IFT140Q96RY7 1462 aa21.36■■□□□ 1.01
CLUHP3-207ENST00000563678 TRHP20396 242 aaPredicted RBP21.35■■□□□ 1.01
CLUHP3-207ENST00000563678 ARAP1Q96P48 1450 aa21.27■■□□□ 1
CLUHP3-207ENST00000563678 TOP2AP11388 1531 aaKnown RBP21.26■□□□□ 0.99
CLUHP3-207ENST00000563678 PRDM2Q13029 1718 aa21.25■□□□□ 0.99
CLUHP3-207ENST00000563678 AEBP2Q6ZN18 517 aaPredicted RBP21.23■□□□□ 0.99
CLUHP3-207ENST00000563678 EIF4G3O43432 1585 aaKnown RBP21.23■□□□□ 0.99
CLUHP3-207ENST00000563678 TOPBP1Q92547 1522 aa21.2■□□□□ 0.98
CLUHP3-207ENST00000563678 RSF1Q96T23 1441 aaPredicted RBP21.2■□□□□ 0.98
CLUHP3-207ENST00000563678 CHD1O14646 1710 aa21.17■□□□□ 0.98
CLUHP3-207ENST00000563678 ABCC8Q09428 1581 aa21.12■□□□□ 0.97
CLUHP3-207ENST00000563678 AQRO60306 1485 aaKnown RBP eCLIP21.09■□□□□ 0.974e-7■■■■□ 19.5
CLUHP3-207ENST00000563678 FBLN2P98095 1184 aa21.07■□□□□ 0.96
CLUHP3-207ENST00000563678 DNMBPQ6XZF7 1577 aa21.06■□□□□ 0.96
CLUHP3-207ENST00000563678 TARBP1Q13395 1621 aaKnown RBP21.05■□□□□ 0.96
CLUHP3-207ENST00000563678 CCDC88BA6NC98 1476 aa21.02■□□□□ 0.96
CLUHP3-207ENST00000563678 CLASP1Q7Z460 1538 aa20.95■□□□□ 0.94
CLUHP3-207ENST00000563678 POLA1P09884 1462 aaPredicted RBP20.94■□□□□ 0.94
CLUHP3-207ENST00000563678 SYNJ1O43426 1573 aa20.88■□□□□ 0.93
CLUHP3-207ENST00000563678 SNAPC4Q5SXM2 1469 aa20.87■□□□□ 0.93
CLUHP3-207ENST00000563678 TDRD9Q8NDG6 1382 aaKnown RBP20.86■□□□□ 0.93
CLUHP3-207ENST00000563678 RAD54L2Q9Y4B4 1467 aa20.85■□□□□ 0.93
CLUHP3-207ENST00000563678 CHMP7Q8WUX9 453 aaPredicted RBP20.83■□□□□ 0.93
CLUHP3-207ENST00000563678 WDR97A6NE52 1622 aa20.82■□□□□ 0.92
CLUHP3-207ENST00000563678 SOGA1O94964 1423 aa20.82■□□□□ 0.92
CLUHP3-207ENST00000563678 MAGI1Q96QZ7 1491 aaPredicted RBP20.81■□□□□ 0.92
CLUHP3-207ENST00000563678 GAPVD1Q14C86 1478 aa20.77■□□□□ 0.92
CLUHP3-207ENST00000563678 SYNJ2O15056 1496 aa20.74■□□□□ 0.91
CLUHP3-207ENST00000563678 GRIN2BQ13224 1484 aa20.74■□□□□ 0.91
CLUHP3-207ENST00000563678 FGD5Q6ZNL6 1462 aa20.7■□□□□ 0.9
CLUHP3-207ENST00000563678 CUX1P39880 1505 aa20.58■□□□□ 0.88
CLUHP3-207ENST00000563678 PBRM1Q86U86 1689 aa20.57■□□□□ 0.88
CLUHP3-207ENST00000563678 ERCC6L2Q5T890 1561 aa20.54■□□□□ 0.88
CLUHP3-207ENST00000563678 CEP170Q5SW79 1584 aa20.47■□□□□ 0.87
CLUHP3-207ENST00000563678 KIF13AQ9H1H9 1805 aa20.47■□□□□ 0.87
CLUHP3-207ENST00000563678 ABCA5Q8WWZ7 1642 aa20.47■□□□□ 0.87
CLUHP3-207ENST00000563678 GRIN2AQ12879 1464 aa20.46■□□□□ 0.87
CLUHP3-207ENST00000563678 ABCA10Q8WWZ4 1543 aa20.46■□□□□ 0.87
CLUHP3-207ENST00000563678 NUP160Q12769 1436 aa20.43■□□□□ 0.86
CLUHP3-207ENST00000563678 SHROOM2Q13796 1616 aa20.4■□□□□ 0.86
CLUHP3-207ENST00000563678 ILDR1Q86SU0 546 aaPredicted RBP20.37■□□□□ 0.85
CLUHP3-207ENST00000563678 ADAMTS12P58397 1594 aa20.37■□□□□ 0.85
CLUHP3-207ENST00000563678 ABCC10Q5T3U5 1492 aa20.31■□□□□ 0.84
CLUHP3-207ENST00000563678 KDM4FA0A1W2PPD8 638 aa20.3■□□□□ 0.84
CLUHP3-207ENST00000563678 FAM69CQ0P6D2 419 aa20.3■□□□□ 0.84
CLUHP3-207ENST00000563678 FHAD1B1AJZ9 1412 aa20.28■□□□□ 0.84
CLUHP3-207ENST00000563678 PRG4Q92954 1404 aaPredicted RBP20.27■□□□□ 0.84
CLUHP3-207ENST00000563678 MAPKBP1O60336 1514 aa20.25■□□□□ 0.83
CLUHP3-207ENST00000563678 WRNQ14191 1432 aaPredicted RBP eCLIP20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms