RNA–Protein interactions for RNA: ENST00000563308.1

SNX29-202, Transcript of sorting nexin 29, humanhuman

TSL 5

Gene SNX29, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-202ENST00000563308 NISCHQ9Y2I1 1504 aa25.18■■□□□ 1.62
SNX29-202ENST00000563308 ABCC9O60706 1549 aa24.3■■□□□ 1.48
SNX29-202ENST00000563308 DNAJC5BQ9UF47 199 aa23.77■■□□□ 1.4
SNX29-202ENST00000563308 CCDC180Q9P1Z9 1646 aa23.06■■□□□ 1.28
SNX29-202ENST00000563308 DNAJC5Q9H3Z4 198 aa22.87■■□□□ 1.25
SNX29-202ENST00000563308 RB1CC1Q8TDY2 1594 aa22.62■■□□□ 1.21
SNX29-202ENST00000563308 PABPN1Q86U42 306 aaKnown RBP eCLIP22.46■■□□□ 1.19
SNX29-202ENST00000563308 NACADO15069 1562 aa22.13■■□□□ 1.13
SNX29-202ENST00000563308 CECR2Q9BXF3 1484 aa22.04■■□□□ 1.12
SNX29-202ENST00000563308 DCAF8L2P0C7V8 631 aa21.98■■□□□ 1.11
SNX29-202ENST00000563308 UNC13AQ9UPW8 1703 aa21.95■■□□□ 1.1
SNX29-202ENST00000563308 CC2D2AQ9P2K1 1620 aa21.85■■□□□ 1.09
SNX29-202ENST00000563308 BICRAQ9NZM4 1560 aa21.82■■□□□ 1.08
SNX29-202ENST00000563308 SHROOM4Q9ULL8 1493 aa21.54■■□□□ 1.04
SNX29-202ENST00000563308 TRIM41Q8WV44 630 aa21.49■■□□□ 1.03
SNX29-202ENST00000563308 EIF4G1Q04637 1599 aaKnown RBP21.48■■□□□ 1.03
SNX29-202ENST00000563308 CUX2O14529 1486 aa21.47■■□□□ 1.03
SNX29-202ENST00000563308 MYO15BQ96JP2 1530 aa21.34■■□□□ 1.01
SNX29-202ENST00000563308 ERCC6Q03468 1493 aa21.2■□□□□ 0.98
SNX29-202ENST00000563308 SCRIBQ14160 1630 aa20.97■□□□□ 0.95
SNX29-202ENST00000563308 ZCCHC6Q5VYS8 1495 aaKnown RBP20.9■□□□□ 0.94
SNX29-202ENST00000563308 DCAF1Q9Y4B6 1507 aa20.82■□□□□ 0.92
SNX29-202ENST00000563308 AEBP2Q6ZN18 517 aaPredicted RBP20.69■□□□□ 0.9
SNX29-202ENST00000563308 THOC2Q8NI27 1593 aaKnown RBP20.46■□□□□ 0.87
SNX29-202ENST00000563308 NESP48681 1621 aa20.45■□□□□ 0.87
SNX29-202ENST00000563308 NCAPD3P42695 1498 aa20.4■□□□□ 0.86
SNX29-202ENST00000563308 OSCARQ8IYS5 282 aa20.39■□□□□ 0.85
SNX29-202ENST00000563308 SMARCA2P51531 1590 aa20.35■□□□□ 0.85
SNX29-202ENST00000563308 TRHP20396 242 aaPredicted RBP20.28■□□□□ 0.84
SNX29-202ENST00000563308 BAZ1AQ9NRL2 1556 aaPredicted RBP20.28■□□□□ 0.84
SNX29-202ENST00000563308 PDS5BQ9NTI5 1447 aa20.19■□□□□ 0.82
SNX29-202ENST00000563308 LAMC3Q9Y6N6 1575 aa20.19■□□□□ 0.82
SNX29-202ENST00000563308 KIF21AQ7Z4S6 1674 aa20.16■□□□□ 0.82
SNX29-202ENST00000563308 ATAD2BQ9ULI0 1458 aa20.16■□□□□ 0.82
SNX29-202ENST00000563308 HMGXB3Q12766 1538 aa20.13■□□□□ 0.81
SNX29-202ENST00000563308 RIMBP3CA6NJZ7 1639 aa20.12■□□□□ 0.81
SNX29-202ENST00000563308 RIMBP3BA6NNM3 1639 aa20.12■□□□□ 0.81
SNX29-202ENST00000563308 RIMBP3Q9UFD9 1639 aa20.12■□□□□ 0.81
SNX29-202ENST00000563308 MRC2Q9UBG0 1479 aa20.02■□□□□ 0.8
SNX29-202ENST00000563308 CYB5RLQ6IPT4 315 aa19.99■□□□□ 0.79
SNX29-202ENST00000563308 BAZ1BQ9UIG0 1483 aaKnown RBP19.99■□□□□ 0.79
SNX29-202ENST00000563308 WDR62O43379 1518 aa19.95■□□□□ 0.78
SNX29-202ENST00000563308 ARHGEF11O15085 1522 aa19.93■□□□□ 0.78
SNX29-202ENST00000563308 SMARCA4P51532 1647 aa19.83■□□□□ 0.76
SNX29-202ENST00000563308 ILDR1Q86SU0 546 aaPredicted RBP19.82■□□□□ 0.76
SNX29-202ENST00000563308 CADPSQ9ULU8 1353 aa19.77■□□□□ 0.76
SNX29-202ENST00000563308 CEP164Q9UPV0 1460 aa19.73■□□□□ 0.75
SNX29-202ENST00000563308 ARAP1Q96P48 1450 aa19.6■□□□□ 0.73
SNX29-202ENST00000563308 PEG3Q9GZU2 1588 aa19.59■□□□□ 0.73
SNX29-202ENST00000563308 FANCD2Q9BXW9 1451 aa19.55■□□□□ 0.72
SNX29-202ENST00000563308 RSF1Q96T23 1441 aaPredicted RBP19.46■□□□□ 0.71
SNX29-202ENST00000563308 MROH2BQ7Z745 1585 aa19.42■□□□□ 0.7
SNX29-202ENST00000563308 FBLN2P98095 1184 aa19.4■□□□□ 0.7
SNX29-202ENST00000563308 URB2Q14146 1524 aaKnown RBP19.39■□□□□ 0.69
SNX29-202ENST00000563308 ZNF608Q9ULD9 1512 aaPredicted RBP19.36■□□□□ 0.69
SNX29-202ENST00000563308 IFT140Q96RY7 1462 aa19.36■□□□□ 0.69
SNX29-202ENST00000563308 CHD1O14646 1710 aa19.32■□□□□ 0.68
SNX29-202ENST00000563308 CFTRP13569 1480 aa19.23■□□□□ 0.67
SNX29-202ENST00000563308 EIF4G3O43432 1585 aaKnown RBP19.22■□□□□ 0.67
SNX29-202ENST00000563308 WIZO95785 1651 aa19.15■□□□□ 0.66
SNX29-202ENST00000563308 AQRO60306 1485 aaKnown RBP eCLIP19.09■□□□□ 0.65
SNX29-202ENST00000563308 KDM4FA0A1W2PPD8 638 aa19.05■□□□□ 0.64
SNX29-202ENST00000563308 SYNJ1O43426 1573 aa19.04■□□□□ 0.64
SNX29-202ENST00000563308 CHMP7Q8WUX9 453 aaPredicted RBP19.03■□□□□ 0.64
SNX29-202ENST00000563308 GAPVD1Q14C86 1478 aa19.03■□□□□ 0.64
SNX29-202ENST00000563308 CLASP1Q7Z460 1538 aa19.01■□□□□ 0.63
SNX29-202ENST00000563308 TOPBP1Q92547 1522 aa19■□□□□ 0.63
SNX29-202ENST00000563308 ABCC8Q09428 1581 aa19■□□□□ 0.63
SNX29-202ENST00000563308 PRDM2Q13029 1718 aa18.96■□□□□ 0.63
SNX29-202ENST00000563308 FBXO41Q8TF61 875 aa18.95■□□□□ 0.62
SNX29-202ENST00000563308 TOP2AP11388 1531 aaKnown RBP18.93■□□□□ 0.62
SNX29-202ENST00000563308 ERCC6L2Q5T890 1561 aa18.93■□□□□ 0.62
SNX29-202ENST00000563308 TARBP1Q13395 1621 aaKnown RBP18.87■□□□□ 0.61
SNX29-202ENST00000563308 SNAPC4Q5SXM2 1469 aa18.86■□□□□ 0.61
SNX29-202ENST00000563308 LMTK3Q96Q04 1460 aa18.85■□□□□ 0.61
SNX29-202ENST00000563308 DNMBPQ6XZF7 1577 aa18.85■□□□□ 0.61
SNX29-202ENST00000563308 KIF13AQ9H1H9 1805 aa18.84■□□□□ 0.61
SNX29-202ENST00000563308 TDRD9Q8NDG6 1382 aaKnown RBP18.8■□□□□ 0.6
SNX29-202ENST00000563308 FAM69CQ0P6D2 419 aa18.79■□□□□ 0.6
SNX29-202ENST00000563308 MAGI1Q96QZ7 1491 aaPredicted RBP18.78■□□□□ 0.6
SNX29-202ENST00000563308 HECW2Q9P2P5 1572 aa18.78■□□□□ 0.6
SNX29-202ENST00000563308 KDM6BO15054 1643 aa18.78■□□□□ 0.6
SNX29-202ENST00000563308 CCDC88BA6NC98 1476 aa18.74■□□□□ 0.59
SNX29-202ENST00000563308 SYNJ2O15056 1496 aa18.74■□□□□ 0.59
SNX29-202ENST00000563308 POLA1P09884 1462 aaPredicted RBP18.72■□□□□ 0.59
SNX29-202ENST00000563308 SOCS7O14512 581 aa18.71■□□□□ 0.59
SNX29-202ENST00000563308 SOGA1O94964 1423 aa18.71■□□□□ 0.59
SNX29-202ENST00000563308 NPM1P06748 294 aaKnown RBP eCLIP18.7■□□□□ 0.58
SNX29-202ENST00000563308 WDR97A6NE52 1622 aa18.69■□□□□ 0.58
SNX29-202ENST00000563308 RAD54L2Q9Y4B4 1467 aa18.69■□□□□ 0.58
SNX29-202ENST00000563308 GRIN2BQ13224 1484 aa18.67■□□□□ 0.58
SNX29-202ENST00000563308 ADGRL1O94910 1474 aa18.65■□□□□ 0.58
SNX29-202ENST00000563308 ABCC10Q5T3U5 1492 aa18.63■□□□□ 0.57
SNX29-202ENST00000563308 TSPOAP1O95153 1857 aa18.53■□□□□ 0.56
SNX29-202ENST00000563308 CEP170Q5SW79 1584 aa18.53■□□□□ 0.56
SNX29-202ENST00000563308 DISP3Q9P2K9 1392 aa18.53■□□□□ 0.56
SNX29-202ENST00000563308 DIP2BQ9P265 1576 aa18.51■□□□□ 0.55
SNX29-202ENST00000563308 ILDR2Q71H61 639 aa18.48■□□□□ 0.55
SNX29-202ENST00000563308 PBRM1Q86U86 1689 aa18.47■□□□□ 0.55
SNX29-202ENST00000563308 MAPKBP1O60336 1514 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms