RNA–Protein interactions for RNA: ENST00000563121.1

ACVR1B-207, Transcript of activin A receptor type 1B, humanhuman

TSL 3

Gene ACVR1B, Length 419 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACVR1B-207ENST00000563121 AEBP2Q6ZN18 517 aaPredicted RBP20.6■□□□□ 0.89
ACVR1B-207ENST00000563121 CHIC1Q5VXU3 224 aa19.95■□□□□ 0.78
ACVR1B-207ENST00000563121 NISCHQ9Y2I1 1504 aa19.61■□□□□ 0.73
ACVR1B-207ENST00000563121 PHF23Q9BUL5 403 aaPredicted RBP17.65■□□□□ 0.42
ACVR1B-207ENST00000563121 CCDC180Q9P1Z9 1646 aa17.64■□□□□ 0.41
ACVR1B-207ENST00000563121 SENP3Q9H4L4 574 aaPredicted RBP17.33■□□□□ 0.36
ACVR1B-207ENST00000563121 ABCC9O60706 1549 aa17.23■□□□□ 0.35
ACVR1B-207ENST00000563121 RB1CC1Q8TDY2 1594 aa16.58■□□□□ 0.24
ACVR1B-207ENST00000563121 NACADO15069 1562 aa16.53■□□□□ 0.24
ACVR1B-207ENST00000563121 MYO15BQ96JP2 1530 aa16.44■□□□□ 0.22
ACVR1B-207ENST00000563121 UNC13AQ9UPW8 1703 aa16.36■□□□□ 0.21
ACVR1B-207ENST00000563121 ZCCHC6Q5VYS8 1495 aaKnown RBP16.35■□□□□ 0.21
ACVR1B-207ENST00000563121 DCAF1Q9Y4B6 1507 aa16.29■□□□□ 0.2
ACVR1B-207ENST00000563121 FOXD1Q16676 465 aa16.22■□□□□ 0.19
ACVR1B-207ENST00000563121 BICRAQ9NZM4 1560 aa16.16■□□□□ 0.18
ACVR1B-207ENST00000563121 DCAF8L2P0C7V8 631 aa16.12■□□□□ 0.17
ACVR1B-207ENST00000563121 PLPPR3Q6T4P5 718 aa16.12■□□□□ 0.17
ACVR1B-207ENST00000563121 SHROOM4Q9ULL8 1493 aa15.98■□□□□ 0.15
ACVR1B-207ENST00000563121 PABPN1Q86U42 306 aaKnown RBP eCLIP15.96■□□□□ 0.15
ACVR1B-207ENST00000563121 SCRIBQ14160 1630 aa15.96■□□□□ 0.15
ACVR1B-207ENST00000563121 DNAJC5BQ9UF47 199 aa15.95■□□□□ 0.14
ACVR1B-207ENST00000563121 EIF4G1Q04637 1599 aaKnown RBP15.7■□□□□ 0.1
ACVR1B-207ENST00000563121 CC2D2AQ9P2K1 1620 aa15.67■□□□□ 0.1
ACVR1B-207ENST00000563121 PPP6R1Q9UPN7 881 aa15.64■□□□□ 0.09
ACVR1B-207ENST00000563121 ADRA2BP18089 450 aa15.62■□□□□ 0.09
ACVR1B-207ENST00000563121 CECR2Q9BXF3 1484 aa15.52■□□□□ 0.07
ACVR1B-207ENST00000563121 SMARCA4P51532 1647 aa15.3■□□□□ 0.04
ACVR1B-207ENST00000563121 PIAS4Q8N2W9 510 aaPredicted RBP15.26■□□□□ 0.03
ACVR1B-207ENST00000563121 NCAPD3P42695 1498 aa15.22■□□□□ 0.03
ACVR1B-207ENST00000563121 BAZ1AQ9NRL2 1556 aaPredicted RBP15.22■□□□□ 0.03
ACVR1B-207ENST00000563121 HMGXB3Q12766 1538 aa15.22■□□□□ 0.03
ACVR1B-207ENST00000563121 ATAD2BQ9ULI0 1458 aa15.2■□□□□ 0.02
ACVR1B-207ENST00000563121 PEG3Q9GZU2 1588 aa15.2■□□□□ 0.02
ACVR1B-207ENST00000563121 SMARCA2P51531 1590 aa15.19■□□□□ 0.02
ACVR1B-207ENST00000563121 MROH2BQ7Z745 1585 aa15.1■□□□□ 0.01
ACVR1B-207ENST00000563121 BAZ1BQ9UIG0 1483 aaKnown RBP15.04■□□□□ -0
ACVR1B-207ENST00000563121 WIZO95785 1651 aa14.94□□□□□ -0.02
ACVR1B-207ENST00000563121 LAMC3Q9Y6N6 1575 aa14.9□□□□□ -0.02
ACVR1B-207ENST00000563121 NESP48681 1621 aa14.89□□□□□ -0.03
ACVR1B-207ENST00000563121 CUX2O14529 1486 aa14.86□□□□□ -0.03
ACVR1B-207ENST00000563121 THOC2Q8NI27 1593 aaKnown RBP14.84□□□□□ -0.03
ACVR1B-207ENST00000563121 ERCC6Q03468 1493 aa14.83□□□□□ -0.03
ACVR1B-207ENST00000563121 MSH5O43196 834 aa14.83□□□□□ -0.04
ACVR1B-207ENST00000563121 KIF21AQ7Z4S6 1674 aa14.82□□□□□ -0.04
ACVR1B-207ENST00000563121 RSF1Q96T23 1441 aaPredicted RBP14.82□□□□□ -0.04
ACVR1B-207ENST00000563121 TOP2AP11388 1531 aaKnown RBP14.79□□□□□ -0.04
ACVR1B-207ENST00000563121 CADPSQ9ULU8 1353 aa14.72□□□□□ -0.05
ACVR1B-207ENST00000563121 PRDM2Q13029 1718 aa14.69□□□□□ -0.06
ACVR1B-207ENST00000563121 PDS5BQ9NTI5 1447 aa14.68□□□□□ -0.06
ACVR1B-207ENST00000563121 CFTRP13569 1480 aa14.65□□□□□ -0.06
ACVR1B-207ENST00000563121 WDR62O43379 1518 aa14.64□□□□□ -0.07
ACVR1B-207ENST00000563121 MRC2Q9UBG0 1479 aa14.61□□□□□ -0.07
ACVR1B-207ENST00000563121 CEP164Q9UPV0 1460 aa14.58□□□□□ -0.08
ACVR1B-207ENST00000563121 FANCD2Q9BXW9 1451 aa14.57□□□□□ -0.08
ACVR1B-207ENST00000563121 CCDC88BA6NC98 1476 aa14.54□□□□□ -0.08
ACVR1B-207ENST00000563121 DNAJC5Q9H3Z4 198 aa14.5□□□□□ -0.09
ACVR1B-207ENST00000563121 URB2Q14146 1524 aaKnown RBP14.48□□□□□ -0.09
ACVR1B-207ENST00000563121 TOPBP1Q92547 1522 aa14.36□□□□□ -0.11
ACVR1B-207ENST00000563121 DNMBPQ6XZF7 1577 aa14.34□□□□□ -0.11
ACVR1B-207ENST00000563121 ABCC8Q09428 1581 aa14.3□□□□□ -0.12
ACVR1B-207ENST00000563121 TARBP1Q13395 1621 aaKnown RBP14.28□□□□□ -0.12
ACVR1B-207ENST00000563121 PPP4R3CPQ6ZMV5 832 aa14.28□□□□□ -0.12
ACVR1B-207ENST00000563121 IFT140Q96RY7 1462 aa14.28□□□□□ -0.12
ACVR1B-207ENST00000563121 EIF4G3O43432 1585 aaKnown RBP14.26□□□□□ -0.13
ACVR1B-207ENST00000563121 ZNF608Q9ULD9 1512 aaPredicted RBP14.24□□□□□ -0.13
ACVR1B-207ENST00000563121 MAPK8IP2Q13387 824 aaPredicted RBP14.23□□□□□ -0.13
ACVR1B-207ENST00000563121 POLA1P09884 1462 aaPredicted RBP14.22□□□□□ -0.13
ACVR1B-207ENST00000563121 WDR97A6NE52 1622 aa14.19□□□□□ -0.14
ACVR1B-207ENST00000563121 CUX1P39880 1505 aa14.19□□□□□ -0.14
ACVR1B-207ENST00000563121 FGD5Q6ZNL6 1462 aa14.13□□□□□ -0.15
ACVR1B-207ENST00000563121 CHD1O14646 1710 aa14.13□□□□□ -0.15
ACVR1B-207ENST00000563121 RAD54L2Q9Y4B4 1467 aa14.1□□□□□ -0.15
ACVR1B-207ENST00000563121 BIVM-ERCC5R4GMW8 1640 aa14.09□□□□□ -0.15
ACVR1B-207ENST00000563121 SUPT5HO00267 1087 aaKnown RBP14.08□□□□□ -0.16
ACVR1B-207ENST00000563121 AQRO60306 1485 aaKnown RBP eCLIP14.07□□□□□ -0.16
ACVR1B-207ENST00000563121 SCAF1Q9H7N4 1312 aaKnown RBP14.07□□□□□ -0.16
ACVR1B-207ENST00000563121 PBRM1Q86U86 1689 aa14.06□□□□□ -0.16
ACVR1B-207ENST00000563121 SOGA1O94964 1423 aa14.06□□□□□ -0.16
ACVR1B-207ENST00000563121 ABCA5Q8WWZ7 1642 aa14.05□□□□□ -0.16
ACVR1B-207ENST00000563121 TOP2BQ02880 1626 aa14.04□□□□□ -0.16
ACVR1B-207ENST00000563121 OSCARQ8IYS5 282 aa14.03□□□□□ -0.16
ACVR1B-207ENST00000563121 ABCA10Q8WWZ4 1543 aa14.03□□□□□ -0.16
ACVR1B-207ENST00000563121 RIMBP3CA6NJZ7 1639 aa14.02□□□□□ -0.16
ACVR1B-207ENST00000563121 RIMBP3BA6NNM3 1639 aa14.02□□□□□ -0.16
ACVR1B-207ENST00000563121 RIMBP3Q9UFD9 1639 aa14.02□□□□□ -0.16
ACVR1B-207ENST00000563121 SYNJ1O43426 1573 aa14.02□□□□□ -0.16
ACVR1B-207ENST00000563121 MAGI1Q96QZ7 1491 aaPredicted RBP14□□□□□ -0.17
ACVR1B-207ENST00000563121 SNAPC4Q5SXM2 1469 aa13.99□□□□□ -0.17
ACVR1B-207ENST00000563121 TDRD9Q8NDG6 1382 aaKnown RBP13.98□□□□□ -0.17
ACVR1B-207ENST00000563121 GRIN2BQ13224 1484 aa13.98□□□□□ -0.17
ACVR1B-207ENST00000563121 ARHGEF11O15085 1522 aa13.97□□□□□ -0.17
ACVR1B-207ENST00000563121 CLASP1Q7Z460 1538 aa13.96□□□□□ -0.17
ACVR1B-207ENST00000563121 WRNQ14191 1432 aaPredicted RBP eCLIP13.96□□□□□ -0.18
ACVR1B-207ENST00000563121 GAPVD1Q14C86 1478 aa13.94□□□□□ -0.18
ACVR1B-207ENST00000563121 KCNA4P22459 653 aa13.94□□□□□ -0.18
ACVR1B-207ENST00000563121 SYNJ2O15056 1496 aa13.93□□□□□ -0.18
ACVR1B-207ENST00000563121 ADAMTS12P58397 1594 aa13.91□□□□□ -0.18
ACVR1B-207ENST00000563121 ARAP1Q96P48 1450 aa13.86□□□□□ -0.19
ACVR1B-207ENST00000563121 ERICH3Q5RHP9 1530 aa13.85□□□□□ -0.19
ACVR1B-207ENST00000563121 DMRT2Q9Y5R5 561 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms