RNA–Protein interactions for RNA: ENST00000562343.2

AC068987.4-201, humanhuman

TSL 5 BASIC

Gene AC068987.4, Length 2,094 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC068987.4-201ENST00000562343 NISCHQ9Y2I1 1504 aa33.57■■■□□ 2.96
AC068987.4-201ENST00000562343 ABCC9O60706 1549 aa31.12■■■□□ 2.57
AC068987.4-201ENST00000562343 CCDC180Q9P1Z9 1646 aa30.39■■■□□ 2.46
AC068987.4-201ENST00000562343 DNAJC5BQ9UF47 199 aa29.75■■■□□ 2.35
AC068987.4-201ENST00000562343 RB1CC1Q8TDY2 1594 aa29.31■■■□□ 2.28
AC068987.4-201ENST00000562343 NACADO15069 1562 aa28.92■■■□□ 2.22
AC068987.4-201ENST00000562343 PABPN1Q86U42 306 aaKnown RBP eCLIP28.9■■■□□ 2.22
AC068987.4-201ENST00000562343 DCAF8L2P0C7V8 631 aa28.79■■■□□ 2.2
AC068987.4-201ENST00000562343 UNC13AQ9UPW8 1703 aa28.54■■■□□ 2.16
AC068987.4-201ENST00000562343 BICRAQ9NZM4 1560 aa28.41■■■□□ 2.14
AC068987.4-201ENST00000562343 MYO15BQ96JP2 1530 aa28.27■■■□□ 2.12
AC068987.4-201ENST00000562343 CECR2Q9BXF3 1484 aa28.1■■■□□ 2.09
AC068987.4-201ENST00000562343 CC2D2AQ9P2K1 1620 aa28.03■■■□□ 2.08
AC068987.4-201ENST00000562343 SHROOM4Q9ULL8 1493 aa28■■■□□ 2.07
AC068987.4-201ENST00000562343 DNAJC5Q9H3Z4 198 aa27.84■■■□□ 2.05
AC068987.4-201ENST00000562343 EIF4G1Q04637 1599 aaKnown RBP27.81■■■□□ 2.04
AC068987.4-201ENST00000562343 SCRIBQ14160 1630 aa27.7■■■□□ 2.03
AC068987.4-201ENST00000562343 ZCCHC6Q5VYS8 1495 aaKnown RBP27.67■■■□□ 2.02
AC068987.4-201ENST00000562343 DCAF1Q9Y4B6 1507 aa27.66■■■□□ 2.02
AC068987.4-201ENST00000562343 CUX2O14529 1486 aa27.08■■□□□ 1.93
AC068987.4-201ENST00000562343 ERCC6Q03468 1493 aa26.97■■□□□ 1.91
AC068987.4-201ENST00000562343 NCAPD3P42695 1498 aa26.71■■□□□ 1.87
AC068987.4-201ENST00000562343 ATAD2BQ9ULI0 1458 aa26.54■■□□□ 1.84
AC068987.4-201ENST00000562343 NESP48681 1621 aa26.51■■□□□ 1.83
AC068987.4-201ENST00000562343 SMARCA2P51531 1590 aa26.44■■□□□ 1.82
AC068987.4-201ENST00000562343 HMGXB3Q12766 1538 aa26.44■■□□□ 1.82
AC068987.4-201ENST00000562343 TRIM41Q8WV44 630 aa26.43■■□□□ 1.82
AC068987.4-201ENST00000562343 THOC2Q8NI27 1593 aaKnown RBP26.34■■□□□ 1.81
AC068987.4-201ENST00000562343 SMARCA4P51532 1647 aa26.32■■□□□ 1.8
AC068987.4-201ENST00000562343 BAZ1BQ9UIG0 1483 aaKnown RBP26.28■■□□□ 1.8
AC068987.4-201ENST00000562343 LAMC3Q9Y6N6 1575 aa26.21■■□□□ 1.79
AC068987.4-201ENST00000562343 PDS5BQ9NTI5 1447 aa26.14■■□□□ 1.78
AC068987.4-201ENST00000562343 BAZ1AQ9NRL2 1556 aaPredicted RBP26.12■■□□□ 1.77
AC068987.4-201ENST00000562343 KIF21AQ7Z4S6 1674 aa26.11■■□□□ 1.77
AC068987.4-201ENST00000562343 PEG3Q9GZU2 1588 aa26.04■■□□□ 1.76
AC068987.4-201ENST00000562343 MRC2Q9UBG0 1479 aa25.93■■□□□ 1.74
AC068987.4-201ENST00000562343 CADPSQ9ULU8 1353 aa25.9■■□□□ 1.74
AC068987.4-201ENST00000562343 MROH2BQ7Z745 1585 aa25.86■■□□□ 1.73
AC068987.4-201ENST00000562343 WDR62O43379 1518 aa25.85■■□□□ 1.73
AC068987.4-201ENST00000562343 OSCARQ8IYS5 282 aa25.79■■□□□ 1.72
AC068987.4-201ENST00000562343 CEP164Q9UPV0 1460 aa25.7■■□□□ 1.7
AC068987.4-201ENST00000562343 FANCD2Q9BXW9 1451 aa25.61■■□□□ 1.69
AC068987.4-201ENST00000562343 WIZO95785 1651 aa25.51■■□□□ 1.67
AC068987.4-201ENST00000562343 RIMBP3CA6NJZ7 1639 aa25.45■■□□□ 1.66
AC068987.4-201ENST00000562343 RIMBP3BA6NNM3 1639 aa25.45■■□□□ 1.66
AC068987.4-201ENST00000562343 RIMBP3Q9UFD9 1639 aa25.45■■□□□ 1.66
AC068987.4-201ENST00000562343 CFTRP13569 1480 aa25.43■■□□□ 1.66
AC068987.4-201ENST00000562343 URB2Q14146 1524 aaKnown RBP25.4■■□□□ 1.66
AC068987.4-201ENST00000562343 ARHGEF11O15085 1522 aa25.32■■□□□ 1.64
AC068987.4-201ENST00000562343 CYB5RLQ6IPT4 315 aa25.25■■□□□ 1.63
AC068987.4-201ENST00000562343 TRHP20396 242 aaPredicted RBP25.23■■□□□ 1.63
AC068987.4-201ENST00000562343 ZNF608Q9ULD9 1512 aaPredicted RBP25.21■■□□□ 1.63
AC068987.4-201ENST00000562343 IFT140Q96RY7 1462 aa25.21■■□□□ 1.63
AC068987.4-201ENST00000562343 TOP2AP11388 1531 aaKnown RBP25.16■■□□□ 1.62
AC068987.4-201ENST00000562343 RSF1Q96T23 1441 aaPredicted RBP25.09■■□□□ 1.61
AC068987.4-201ENST00000562343 PRDM2Q13029 1718 aa25.06■■□□□ 1.6
AC068987.4-201ENST00000562343 TOPBP1Q92547 1522 aa25.03■■□□□ 1.6
AC068987.4-201ENST00000562343 EIF4G3O43432 1585 aaKnown RBP25.03■■□□□ 1.6
AC068987.4-201ENST00000562343 AEBP2Q6ZN18 517 aaPredicted RBP25.02■■□□□ 1.6
AC068987.4-201ENST00000562343 ARAP1Q96P48 1450 aa25.01■■□□□ 1.59
AC068987.4-201ENST00000562343 FBLN2P98095 1184 aa24.99■■□□□ 1.59
AC068987.4-201ENST00000562343 ABCC8Q09428 1581 aa24.96■■□□□ 1.59
AC068987.4-201ENST00000562343 CHD1O14646 1710 aa24.95■■□□□ 1.58
AC068987.4-201ENST00000562343 AQRO60306 1485 aaKnown RBP eCLIP24.93■■□□□ 1.58
AC068987.4-201ENST00000562343 CCDC88BA6NC98 1476 aa24.89■■□□□ 1.57
AC068987.4-201ENST00000562343 SUPT5HO00267 1087 aaKnown RBP24.87■■□□□ 1.57
AC068987.4-201ENST00000562343 DNMBPQ6XZF7 1577 aa24.87■■□□□ 1.57
AC068987.4-201ENST00000562343 TARBP1Q13395 1621 aaKnown RBP24.81■■□□□ 1.56
AC068987.4-201ENST00000562343 POLA1P09884 1462 aaPredicted RBP24.72■■□□□ 1.55
AC068987.4-201ENST00000562343 TDRD9Q8NDG6 1382 aaKnown RBP24.68■■□□□ 1.54
AC068987.4-201ENST00000562343 CHMP7Q8WUX9 453 aaPredicted RBP24.67■■□□□ 1.54
AC068987.4-201ENST00000562343 RAD54L2Q9Y4B4 1467 aa24.67■■□□□ 1.54
AC068987.4-201ENST00000562343 SNAPC4Q5SXM2 1469 aa24.65■■□□□ 1.54
AC068987.4-201ENST00000562343 CLASP1Q7Z460 1538 aa24.65■■□□□ 1.54
AC068987.4-201ENST00000562343 SOGA1O94964 1423 aa24.65■■□□□ 1.54
AC068987.4-201ENST00000562343 SYNJ1O43426 1573 aa24.63■■□□□ 1.53
AC068987.4-201ENST00000562343 MAGI1Q96QZ7 1491 aaPredicted RBP24.55■■□□□ 1.52
AC068987.4-201ENST00000562343 WDR97A6NE52 1622 aa24.53■■□□□ 1.52
AC068987.4-201ENST00000562343 GRIN2BQ13224 1484 aa24.5■■□□□ 1.51
AC068987.4-201ENST00000562343 GAPVD1Q14C86 1478 aa24.5■■□□□ 1.51
AC068987.4-201ENST00000562343 FGD5Q6ZNL6 1462 aa24.49■■□□□ 1.51
AC068987.4-201ENST00000562343 SYNJ2O15056 1496 aa24.48■■□□□ 1.51
AC068987.4-201ENST00000562343 CUX1P39880 1505 aa24.34■■□□□ 1.49
AC068987.4-201ENST00000562343 PBRM1Q86U86 1689 aa24.3■■□□□ 1.48
AC068987.4-201ENST00000562343 ERCC6L2Q5T890 1561 aa24.22■■□□□ 1.47
AC068987.4-201ENST00000562343 GRIN2AQ12879 1464 aa24.16■■□□□ 1.46
AC068987.4-201ENST00000562343 ABCA10Q8WWZ4 1543 aa24.16■■□□□ 1.46
AC068987.4-201ENST00000562343 ABCA5Q8WWZ7 1642 aa24.15■■□□□ 1.46
AC068987.4-201ENST00000562343 CEP170Q5SW79 1584 aa24.15■■□□□ 1.46
AC068987.4-201ENST00000562343 NUP160Q12769 1436 aa24.09■■□□□ 1.45
AC068987.4-201ENST00000562343 KIF13AQ9H1H9 1805 aa24.06■■□□□ 1.44
AC068987.4-201ENST00000562343 ADAMTS12P58397 1594 aa24.04■■□□□ 1.44
AC068987.4-201ENST00000562343 SHROOM2Q13796 1616 aa24.02■■□□□ 1.44
AC068987.4-201ENST00000562343 FAM69CQ0P6D2 419 aa24■■□□□ 1.43
AC068987.4-201ENST00000562343 FHAD1B1AJZ9 1412 aa23.99■■□□□ 1.43
AC068987.4-201ENST00000562343 WRNQ14191 1432 aaPredicted RBP eCLIP23.98■■□□□ 1.43
AC068987.4-201ENST00000562343 NPM1P06748 294 aaKnown RBP eCLIP23.97■■□□□ 1.43
AC068987.4-201ENST00000562343 PRG4Q92954 1404 aaPredicted RBP23.96■■□□□ 1.43
AC068987.4-201ENST00000562343 ABCC10Q5T3U5 1492 aa23.92■■□□□ 1.42
AC068987.4-201ENST00000562343 ILDR1Q86SU0 546 aaPredicted RBP23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms