RNA–Protein interactions for RNA: ENST00000562083.1

CCP110-205, Transcript of centriolar coiled-coil protein 110, humanhuman

TSL 3

Gene CCP110, Length 595 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCP110-205ENST00000562083 NISCHQ9Y2I1 1504 aa33.69■■■□□ 2.98
CCP110-205ENST00000562083 ABCC9O60706 1549 aa31.63■■■□□ 2.65
CCP110-205ENST00000562083 DNAJC5BQ9UF47 199 aa30.63■■■□□ 2.49
CCP110-205ENST00000562083 CCDC180Q9P1Z9 1646 aa30.56■■■□□ 2.48
CCP110-205ENST00000562083 RB1CC1Q8TDY2 1594 aa29.55■■■□□ 2.32
CCP110-205ENST00000562083 PABPN1Q86U42 306 aaKnown RBP eCLIP29.34■■■□□ 2.29
CCP110-205ENST00000562083 NACADO15069 1562 aa29.11■■■□□ 2.25
CCP110-205ENST00000562083 UNC13AQ9UPW8 1703 aa29.04■■■□□ 2.24
CCP110-205ENST00000562083 DCAF8L2P0C7V8 631 aa28.9■■■□□ 2.22
CCP110-205ENST00000562083 BICRAQ9NZM4 1560 aa28.88■■■□□ 2.21
CCP110-205ENST00000562083 DNAJC5Q9H3Z4 198 aa28.66■■■□□ 2.18
CCP110-205ENST00000562083 CECR2Q9BXF3 1484 aa28.53■■■□□ 2.16
CCP110-205ENST00000562083 CC2D2AQ9P2K1 1620 aa28.49■■■□□ 2.15
CCP110-205ENST00000562083 MYO15BQ96JP2 1530 aa28.35■■■□□ 2.13
CCP110-205ENST00000562083 EIF4G1Q04637 1599 aaKnown RBP28.18■■■□□ 2.1
CCP110-205ENST00000562083 SHROOM4Q9ULL8 1493 aa28.14■■■□□ 2.09
CCP110-205ENST00000562083 SCRIBQ14160 1630 aa27.92■■■□□ 2.06
CCP110-205ENST00000562083 ZCCHC6Q5VYS8 1495 aaKnown RBP27.7■■■□□ 2.03
CCP110-205ENST00000562083 DCAF1Q9Y4B6 1507 aa27.67■■■□□ 2.02
CCP110-205ENST00000562083 CUX2O14529 1486 aa27.51■■□□□ 1.99
CCP110-205ENST00000562083 ERCC6Q03468 1493 aa27.27■■□□□ 1.96
CCP110-205ENST00000562083 TRIM41Q8WV44 630 aa27.07■■□□□ 1.92
CCP110-205ENST00000562083 NESP48681 1621 aa26.94■■□□□ 1.9
CCP110-205ENST00000562083 NCAPD3P42695 1498 aa26.93■■□□□ 1.9
CCP110-205ENST00000562083 THOC2Q8NI27 1593 aaKnown RBP26.79■■□□□ 1.88
CCP110-205ENST00000562083 ATAD2BQ9ULI0 1458 aa26.75■■□□□ 1.87
CCP110-205ENST00000562083 HMGXB3Q12766 1538 aa26.61■■□□□ 1.85
CCP110-205ENST00000562083 SMARCA2P51531 1590 aa26.58■■□□□ 1.85
CCP110-205ENST00000562083 KIF21AQ7Z4S6 1674 aa26.52■■□□□ 1.84
CCP110-205ENST00000562083 SMARCA4P51532 1647 aa26.49■■□□□ 1.83
CCP110-205ENST00000562083 LAMC3Q9Y6N6 1575 aa26.44■■□□□ 1.82
CCP110-205ENST00000562083 BAZ1BQ9UIG0 1483 aaKnown RBP26.41■■□□□ 1.82
CCP110-205ENST00000562083 PDS5BQ9NTI5 1447 aa26.31■■□□□ 1.8
CCP110-205ENST00000562083 BAZ1AQ9NRL2 1556 aaPredicted RBP26.25■■□□□ 1.79
CCP110-205ENST00000562083 PEG3Q9GZU2 1588 aa26.19■■□□□ 1.78
CCP110-205ENST00000562083 MRC2Q9UBG0 1479 aa26.18■■□□□ 1.78
CCP110-205ENST00000562083 WDR62O43379 1518 aa26.16■■□□□ 1.78
CCP110-205ENST00000562083 OSCARQ8IYS5 282 aa26.13■■□□□ 1.77
CCP110-205ENST00000562083 CADPSQ9ULU8 1353 aa26.07■■□□□ 1.76
CCP110-205ENST00000562083 MROH2BQ7Z745 1585 aa26.02■■□□□ 1.76
CCP110-205ENST00000562083 RIMBP3CA6NJZ7 1639 aa25.97■■□□□ 1.75
CCP110-205ENST00000562083 RIMBP3BA6NNM3 1639 aa25.97■■□□□ 1.75
CCP110-205ENST00000562083 RIMBP3Q9UFD9 1639 aa25.97■■□□□ 1.75
CCP110-205ENST00000562083 CEP164Q9UPV0 1460 aa25.88■■□□□ 1.73
CCP110-205ENST00000562083 FANCD2Q9BXW9 1451 aa25.8■■□□□ 1.72
CCP110-205ENST00000562083 ARHGEF11O15085 1522 aa25.77■■□□□ 1.72
CCP110-205ENST00000562083 URB2Q14146 1524 aaKnown RBP25.71■■□□□ 1.71
CCP110-205ENST00000562083 WIZO95785 1651 aa25.67■■□□□ 1.7
CCP110-205ENST00000562083 CYB5RLQ6IPT4 315 aa25.66■■□□□ 1.7
CCP110-205ENST00000562083 TRHP20396 242 aaPredicted RBP25.65■■□□□ 1.7
CCP110-205ENST00000562083 CFTRP13569 1480 aa25.59■■□□□ 1.69
CCP110-205ENST00000562083 ZNF608Q9ULD9 1512 aaPredicted RBP25.58■■□□□ 1.68
CCP110-205ENST00000562083 AEBP2Q6ZN18 517 aaPredicted RBP25.53■■□□□ 1.68
CCP110-205ENST00000562083 ARAP1Q96P48 1450 aa25.48■■□□□ 1.67
CCP110-205ENST00000562083 IFT140Q96RY7 1462 aa25.38■■□□□ 1.65
CCP110-205ENST00000562083 CHD1O14646 1710 aa25.34■■□□□ 1.65
CCP110-205ENST00000562083 EIF4G3O43432 1585 aaKnown RBP25.31■■□□□ 1.64
CCP110-205ENST00000562083 PRDM2Q13029 1718 aa25.23■■□□□ 1.63
CCP110-205ENST00000562083 TOPBP1Q92547 1522 aa25.22■■□□□ 1.63
CCP110-205ENST00000562083 AQRO60306 1485 aaKnown RBP eCLIP25.2■■□□□ 1.62
CCP110-205ENST00000562083 RSF1Q96T23 1441 aaPredicted RBP25.2■■□□□ 1.62
CCP110-205ENST00000562083 FBLN2P98095 1184 aa25.19■■□□□ 1.62
CCP110-205ENST00000562083 TOP2AP11388 1531 aaKnown RBP25.17■■□□□ 1.62
CCP110-205ENST00000562083 TARBP1Q13395 1621 aaKnown RBP25.09■■□□□ 1.61
CCP110-205ENST00000562083 DNMBPQ6XZF7 1577 aa25.01■■□□□ 1.59
CCP110-205ENST00000562083 CLASP1Q7Z460 1538 aa24.99■■□□□ 1.59
CCP110-205ENST00000562083 ABCC8Q09428 1581 aa24.97■■□□□ 1.59
CCP110-205ENST00000562083 CCDC88BA6NC98 1476 aa24.96■■□□□ 1.59
CCP110-205ENST00000562083 POLA1P09884 1462 aaPredicted RBP24.9■■□□□ 1.58
CCP110-205ENST00000562083 TDRD9Q8NDG6 1382 aaKnown RBP24.9■■□□□ 1.58
CCP110-205ENST00000562083 RAD54L2Q9Y4B4 1467 aa24.89■■□□□ 1.58
CCP110-205ENST00000562083 SNAPC4Q5SXM2 1469 aa24.88■■□□□ 1.57
CCP110-205ENST00000562083 SYNJ1O43426 1573 aa24.8■■□□□ 1.56
CCP110-205ENST00000562083 CHMP7Q8WUX9 453 aaPredicted RBP24.79■■□□□ 1.56
CCP110-205ENST00000562083 GAPVD1Q14C86 1478 aa24.78■■□□□ 1.56
CCP110-205ENST00000562083 SOGA1O94964 1423 aa24.75■■□□□ 1.55
CCP110-205ENST00000562083 MAGI1Q96QZ7 1491 aaPredicted RBP24.69■■□□□ 1.54
CCP110-205ENST00000562083 ILDR1Q86SU0 546 aaPredicted RBP24.68■■□□□ 1.54
CCP110-205ENST00000562083 SYNJ2O15056 1496 aa24.65■■□□□ 1.54
CCP110-205ENST00000562083 ERCC6L2Q5T890 1561 aa24.64■■□□□ 1.54
CCP110-205ENST00000562083 FGD5Q6ZNL6 1462 aa24.62■■□□□ 1.53
CCP110-205ENST00000562083 GRIN2BQ13224 1484 aa24.61■■□□□ 1.53
CCP110-205ENST00000562083 WDR97A6NE52 1622 aa24.6■■□□□ 1.53
CCP110-205ENST00000562083 KIF13AQ9H1H9 1805 aa24.56■■□□□ 1.52
CCP110-205ENST00000562083 PBRM1Q86U86 1689 aa24.5■■□□□ 1.51
CCP110-205ENST00000562083 CUX1P39880 1505 aa24.48■■□□□ 1.51
CCP110-205ENST00000562083 KDM4FA0A1W2PPD8 638 aa24.46■■□□□ 1.51
CCP110-205ENST00000562083 CEP170Q5SW79 1584 aa24.41■■□□□ 1.5
CCP110-205ENST00000562083 GRIN2AQ12879 1464 aa24.32■■□□□ 1.48
CCP110-205ENST00000562083 ABCA5Q8WWZ7 1642 aa24.32■■□□□ 1.48
CCP110-205ENST00000562083 SHROOM2Q13796 1616 aa24.28■■□□□ 1.48
CCP110-205ENST00000562083 NUP160Q12769 1436 aa24.28■■□□□ 1.48
CCP110-205ENST00000562083 FAM69CQ0P6D2 419 aa24.28■■□□□ 1.48
CCP110-205ENST00000562083 ABCA10Q8WWZ4 1543 aa24.24■■□□□ 1.47
CCP110-205ENST00000562083 ABCC10Q5T3U5 1492 aa24.22■■□□□ 1.47
CCP110-205ENST00000562083 ADAMTS12P58397 1594 aa24.2■■□□□ 1.47
CCP110-205ENST00000562083 KDM6BO15054 1643 aa24.18■■□□□ 1.46
CCP110-205ENST00000562083 DIP2BQ9P265 1576 aa24.16■■□□□ 1.46
CCP110-205ENST00000562083 PRG4Q92954 1404 aaPredicted RBP24.14■■□□□ 1.45
CCP110-205ENST00000562083 TSPOAP1O95153 1857 aa24.13■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms