RNA–Protein interactions for RNA: ENST00000561526.5

SNAP23-204, Transcript of synaptosome associated protein 23, humanhuman

TSL 4

Gene SNAP23, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP23-204ENST00000561526 AEBP2Q6ZN18 517 aaPredicted RBP17.29■□□□□ 0.36
SNAP23-204ENST00000561526 CHIC1Q5VXU3 224 aa16.96■□□□□ 0.31
SNAP23-204ENST00000561526 NISCHQ9Y2I1 1504 aa15.98■□□□□ 0.15
SNAP23-204ENST00000561526 PHF23Q9BUL5 403 aaPredicted RBP14.9□□□□□ -0.02
SNAP23-204ENST00000561526 SENP3Q9H4L4 574 aaPredicted RBP14.72□□□□□ -0.05
SNAP23-204ENST00000561526 CCDC180Q9P1Z9 1646 aa14.24□□□□□ -0.13
SNAP23-204ENST00000561526 ABCC9O60706 1549 aa14.16□□□□□ -0.14
SNAP23-204ENST00000561526 PLPPR3Q6T4P5 718 aa13.84□□□□□ -0.19
SNAP23-204ENST00000561526 FOXD1Q16676 465 aa13.63□□□□□ -0.23
SNAP23-204ENST00000561526 RB1CC1Q8TDY2 1594 aa13.51□□□□□ -0.25
SNAP23-204ENST00000561526 NACADO15069 1562 aa13.47□□□□□ -0.25
SNAP23-204ENST00000561526 DCAF8L2P0C7V8 631 aa13.38□□□□□ -0.27
SNAP23-204ENST00000561526 MYO15BQ96JP2 1530 aa13.38□□□□□ -0.27
SNAP23-204ENST00000561526 DNAJC5BQ9UF47 199 aa13.27□□□□□ -0.29
SNAP23-204ENST00000561526 ZCCHC6Q5VYS8 1495 aaKnown RBP13.27□□□□□ -0.29
SNAP23-204ENST00000561526 PABPN1Q86U42 306 aaKnown RBP eCLIP13.23□□□□□ -0.29
SNAP23-204ENST00000561526 DCAF1Q9Y4B6 1507 aa13.23□□□□□ -0.29
SNAP23-204ENST00000561526 ADRA2BP18089 450 aa13.18□□□□□ -0.3
SNAP23-204ENST00000561526 UNC13AQ9UPW8 1703 aa13.17□□□□□ -0.3
SNAP23-204ENST00000561526 BICRAQ9NZM4 1560 aa13.16□□□□□ -0.3
SNAP23-204ENST00000561526 PPP6R1Q9UPN7 881 aa13.15□□□□□ -0.3
SNAP23-204ENST00000561526 SHROOM4Q9ULL8 1493 aa13□□□□□ -0.33
SNAP23-204ENST00000561526 SCRIBQ14160 1630 aa12.98□□□□□ -0.33
SNAP23-204ENST00000561526 PIAS4Q8N2W9 510 aaPredicted RBP12.93□□□□□ -0.34
SNAP23-204ENST00000561526 EIF4G1Q04637 1599 aaKnown RBP12.81□□□□□ -0.36
SNAP23-204ENST00000561526 CC2D2AQ9P2K1 1620 aa12.79□□□□□ -0.36
SNAP23-204ENST00000561526 CECR2Q9BXF3 1484 aa12.76□□□□□ -0.37
SNAP23-204ENST00000561526 MSH5O43196 834 aa12.58□□□□□ -0.4
SNAP23-204ENST00000561526 NCAPD3P42695 1498 aa12.48□□□□□ -0.41
SNAP23-204ENST00000561526 ATAD2BQ9ULI0 1458 aa12.44□□□□□ -0.42
SNAP23-204ENST00000561526 SMARCA4P51532 1647 aa12.41□□□□□ -0.42
SNAP23-204ENST00000561526 SMARCA2P51531 1590 aa12.38□□□□□ -0.43
SNAP23-204ENST00000561526 BAZ1AQ9NRL2 1556 aaPredicted RBP12.38□□□□□ -0.43
SNAP23-204ENST00000561526 HMGXB3Q12766 1538 aa12.36□□□□□ -0.43
SNAP23-204ENST00000561526 PEG3Q9GZU2 1588 aa12.34□□□□□ -0.43
SNAP23-204ENST00000561526 MROH2BQ7Z745 1585 aa12.31□□□□□ -0.44
SNAP23-204ENST00000561526 BAZ1BQ9UIG0 1483 aaKnown RBP12.29□□□□□ -0.44
SNAP23-204ENST00000561526 NESP48681 1621 aa12.21□□□□□ -0.46
SNAP23-204ENST00000561526 PPP4R3CPQ6ZMV5 832 aa12.2□□□□□ -0.46
SNAP23-204ENST00000561526 ERCC6Q03468 1493 aa12.2□□□□□ -0.46
SNAP23-204ENST00000561526 CUX2O14529 1486 aa12.18□□□□□ -0.46
SNAP23-204ENST00000561526 LAMC3Q9Y6N6 1575 aa12.13□□□□□ -0.47
SNAP23-204ENST00000561526 WIZO95785 1651 aa12.13□□□□□ -0.47
SNAP23-204ENST00000561526 RSF1Q96T23 1441 aaPredicted RBP12.12□□□□□ -0.47
SNAP23-204ENST00000561526 DNAJC5Q9H3Z4 198 aa12.1□□□□□ -0.47
SNAP23-204ENST00000561526 SCAF1Q9H7N4 1312 aaKnown RBP12.1□□□□□ -0.47
SNAP23-204ENST00000561526 CADPSQ9ULU8 1353 aa12.09□□□□□ -0.47
SNAP23-204ENST00000561526 PDS5BQ9NTI5 1447 aa12.07□□□□□ -0.48
SNAP23-204ENST00000561526 THOC2Q8NI27 1593 aaKnown RBP12.05□□□□□ -0.48
SNAP23-204ENST00000561526 TOP2AP11388 1531 aaKnown RBP12.01□□□□□ -0.49
SNAP23-204ENST00000561526 KIF21AQ7Z4S6 1674 aa12□□□□□ -0.49
SNAP23-204ENST00000561526 CFTRP13569 1480 aa11.98□□□□□ -0.49
SNAP23-204ENST00000561526 KCNA4P22459 653 aa11.97□□□□□ -0.49
SNAP23-204ENST00000561526 MRC2Q9UBG0 1479 aa11.95□□□□□ -0.5
SNAP23-204ENST00000561526 MAPK8IP2Q13387 824 aaPredicted RBP11.94□□□□□ -0.5
SNAP23-204ENST00000561526 NCBP3Q53F19 620 aaKnown RBP11.94□□□□□ -0.5
SNAP23-204ENST00000561526 WDR62O43379 1518 aa11.93□□□□□ -0.5
SNAP23-204ENST00000561526 FANCD2Q9BXW9 1451 aa11.93□□□□□ -0.5
SNAP23-204ENST00000561526 CEP164Q9UPV0 1460 aa11.91□□□□□ -0.5
SNAP23-204ENST00000561526 CCDC88BA6NC98 1476 aa11.89□□□□□ -0.51
SNAP23-204ENST00000561526 CNKSR2Q8WXI2 1034 aa11.84□□□□□ -0.51
SNAP23-204ENST00000561526 URB2Q14146 1524 aaKnown RBP11.84□□□□□ -0.51
SNAP23-204ENST00000561526 PRDM2Q13029 1718 aa11.75□□□□□ -0.53
SNAP23-204ENST00000561526 DMRT2Q9Y5R5 561 aa11.73□□□□□ -0.53
SNAP23-204ENST00000561526 TOPBP1Q92547 1522 aa11.71□□□□□ -0.53
SNAP23-204ENST00000561526 NPM3O75607 178 aaKnown RBP11.7□□□□□ -0.54
SNAP23-204ENST00000561526 ABCC8Q09428 1581 aa11.7□□□□□ -0.54
SNAP23-204ENST00000561526 IFT140Q96RY7 1462 aa11.7□□□□□ -0.54
SNAP23-204ENST00000561526 ZNF608Q9ULD9 1512 aaPredicted RBP11.67□□□□□ -0.54
SNAP23-204ENST00000561526 DNMBPQ6XZF7 1577 aa11.67□□□□□ -0.54
SNAP23-204ENST00000561526 OSCARQ8IYS5 282 aa11.65□□□□□ -0.54
SNAP23-204ENST00000561526 POLA1P09884 1462 aaPredicted RBP11.61□□□□□ -0.55
SNAP23-204ENST00000561526 TARBP1Q13395 1621 aaKnown RBP11.6□□□□□ -0.55
SNAP23-204ENST00000561526 SUPT5HO00267 1087 aaKnown RBP11.6□□□□□ -0.55
SNAP23-204ENST00000561526 AQRO60306 1485 aaKnown RBP eCLIP11.58□□□□□ -0.56
SNAP23-204ENST00000561526 RNF216Q9NWF9 866 aaPredicted RBP11.58□□□□□ -0.56
SNAP23-204ENST00000561526 EIF4G3O43432 1585 aaKnown RBP11.57□□□□□ -0.56
SNAP23-204ENST00000561526 SOGA1O94964 1423 aa11.56□□□□□ -0.56
SNAP23-204ENST00000561526 RAD54L2Q9Y4B4 1467 aa11.56□□□□□ -0.56
SNAP23-204ENST00000561526 CUX1P39880 1505 aa11.55□□□□□ -0.56
SNAP23-204ENST00000561526 FGD5Q6ZNL6 1462 aa11.54□□□□□ -0.56
SNAP23-204ENST00000561526 TRIM41Q8WV44 630 aa11.53□□□□□ -0.56
SNAP23-204ENST00000561526 TDRD9Q8NDG6 1382 aaKnown RBP11.53□□□□□ -0.56
SNAP23-204ENST00000561526 HOXD11P31277 338 aaPredicted RBP11.49□□□□□ -0.57
SNAP23-204ENST00000561526 WDR97A6NE52 1622 aa11.48□□□□□ -0.57
SNAP23-204ENST00000561526 SLC4A1APQ9BWU0 796 aaKnown RBP11.45□□□□□ -0.58
SNAP23-204ENST00000561526 RIMBP3CA6NJZ7 1639 aa11.45□□□□□ -0.58
SNAP23-204ENST00000561526 RIMBP3BA6NNM3 1639 aa11.45□□□□□ -0.58
SNAP23-204ENST00000561526 RIMBP3Q9UFD9 1639 aa11.45□□□□□ -0.58
SNAP23-204ENST00000561526 ARHGEF11O15085 1522 aa11.45□□□□□ -0.58
SNAP23-204ENST00000561526 SNAPC4Q5SXM2 1469 aa11.44□□□□□ -0.58
SNAP23-204ENST00000561526 FBLN2P98095 1184 aa11.44□□□□□ -0.58
SNAP23-204ENST00000561526 ABCA10Q8WWZ4 1543 aa11.44□□□□□ -0.58
SNAP23-204ENST00000561526 GRIN2BQ13224 1484 aa11.44□□□□□ -0.58
SNAP23-204ENST00000561526 MAGI1Q96QZ7 1491 aaPredicted RBP11.44□□□□□ -0.58
SNAP23-204ENST00000561526 CHD1O14646 1710 aa11.43□□□□□ -0.58
SNAP23-204ENST00000561526 GAPVD1Q14C86 1478 aa11.41□□□□□ -0.58
SNAP23-204ENST00000561526 WRNQ14191 1432 aaPredicted RBP eCLIP11.4□□□□□ -0.58
SNAP23-204ENST00000561526 SYNJ2O15056 1496 aa11.39□□□□□ -0.59
SNAP23-204ENST00000561526 CHMP7Q8WUX9 453 aaPredicted RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms