RNA–Protein interactions for RNA: ENST00000561356.1

TM2D3-214, Transcript of TM2 domain containing 3, humanhuman

TSL 4

Gene TM2D3, Length 565 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM2D3-214ENST00000561356 NISCHQ9Y2I1 1504 aa20.71■□□□□ 0.91
TM2D3-214ENST00000561356 ABCC9O60706 1549 aa20.43■□□□□ 0.86
TM2D3-214ENST00000561356 DNAJC5BQ9UF47 199 aa20.37■□□□□ 0.85
TM2D3-214ENST00000561356 DNAJC5Q9H3Z4 198 aa19.49■□□□□ 0.71
TM2D3-214ENST00000561356 CCDC180Q9P1Z9 1646 aa19.13■□□□□ 0.65
TM2D3-214ENST00000561356 RB1CC1Q8TDY2 1594 aa18.78■□□□□ 0.6
TM2D3-214ENST00000561356 PABPN1Q86U42 306 aaKnown RBP eCLIP18.77■□□□□ 0.6
TM2D3-214ENST00000561356 UNC13AQ9UPW8 1703 aa18.54■□□□□ 0.56
TM2D3-214ENST00000561356 CECR2Q9BXF3 1484 aa18.5■□□□□ 0.55
TM2D3-214ENST00000561356 BICRAQ9NZM4 1560 aa18.47■□□□□ 0.55
TM2D3-214ENST00000561356 CC2D2AQ9P2K1 1620 aa18.4■□□□□ 0.54
TM2D3-214ENST00000561356 NACADO15069 1562 aa18.34■□□□□ 0.53
TM2D3-214ENST00000561356 TRIM41Q8WV44 630 aa18.1■□□□□ 0.49
TM2D3-214ENST00000561356 CUX2O14529 1486 aa18.05■□□□□ 0.48
TM2D3-214ENST00000561356 EIF4G1Q04637 1599 aaKnown RBP18.04■□□□□ 0.48
TM2D3-214ENST00000561356 SHROOM4Q9ULL8 1493 aa17.88■□□□□ 0.45
TM2D3-214ENST00000561356 DCAF8L2P0C7V8 631 aa17.86■□□□□ 0.45
TM2D3-214ENST00000561356 MYO15BQ96JP2 1530 aa17.66■□□□□ 0.42
TM2D3-214ENST00000561356 ERCC6Q03468 1493 aa17.62■□□□□ 0.41
TM2D3-214ENST00000561356 SCRIBQ14160 1630 aa17.42■□□□□ 0.38
TM2D3-214ENST00000561356 AEBP2Q6ZN18 517 aaPredicted RBP17.35■□□□□ 0.37
TM2D3-214ENST00000561356 THOC2Q8NI27 1593 aaKnown RBP17.34■□□□□ 0.37
TM2D3-214ENST00000561356 CHIC1Q5VXU3 224 aa17.28■□□□□ 0.36
TM2D3-214ENST00000561356 NESP48681 1621 aa17.24■□□□□ 0.35
TM2D3-214ENST00000561356 BAZ1AQ9NRL2 1556 aaPredicted RBP17.07■□□□□ 0.32
TM2D3-214ENST00000561356 SMARCA2P51531 1590 aa17.06■□□□□ 0.32
TM2D3-214ENST00000561356 RIMBP3CA6NJZ7 1639 aa17.03■□□□□ 0.32
TM2D3-214ENST00000561356 RIMBP3BA6NNM3 1639 aa17.03■□□□□ 0.32
TM2D3-214ENST00000561356 RIMBP3Q9UFD9 1639 aa17.03■□□□□ 0.32
TM2D3-214ENST00000561356 DCAF1Q9Y4B6 1507 aa16.98■□□□□ 0.31
TM2D3-214ENST00000561356 NCAPD3P42695 1498 aa16.98■□□□□ 0.31
TM2D3-214ENST00000561356 KIF21AQ7Z4S6 1674 aa16.97■□□□□ 0.31
TM2D3-214ENST00000561356 ILDR1Q86SU0 546 aaPredicted RBP16.94■□□□□ 0.3
TM2D3-214ENST00000561356 ZCCHC6Q5VYS8 1495 aaKnown RBP16.93■□□□□ 0.3
TM2D3-214ENST00000561356 OSCARQ8IYS5 282 aa16.9■□□□□ 0.3
TM2D3-214ENST00000561356 TRHP20396 242 aaPredicted RBP16.83■□□□□ 0.28
TM2D3-214ENST00000561356 ARHGEF11O15085 1522 aa16.82■□□□□ 0.28
TM2D3-214ENST00000561356 ATAD2BQ9ULI0 1458 aa16.79■□□□□ 0.28
TM2D3-214ENST00000561356 LAMC3Q9Y6N6 1575 aa16.78■□□□□ 0.28
TM2D3-214ENST00000561356 HMGXB3Q12766 1538 aa16.75■□□□□ 0.27
TM2D3-214ENST00000561356 WDR62O43379 1518 aa16.74■□□□□ 0.27
TM2D3-214ENST00000561356 MRC2Q9UBG0 1479 aa16.68■□□□□ 0.26
TM2D3-214ENST00000561356 CYB5RLQ6IPT4 315 aa16.66■□□□□ 0.26
TM2D3-214ENST00000561356 PDS5BQ9NTI5 1447 aa16.65■□□□□ 0.26
TM2D3-214ENST00000561356 ARAP1Q96P48 1450 aa16.61■□□□□ 0.25
TM2D3-214ENST00000561356 BAZ1BQ9UIG0 1483 aaKnown RBP16.49■□□□□ 0.23
TM2D3-214ENST00000561356 SMARCA4P51532 1647 aa16.46■□□□□ 0.23
TM2D3-214ENST00000561356 CADPSQ9ULU8 1353 aa16.36■□□□□ 0.21
TM2D3-214ENST00000561356 CEP164Q9UPV0 1460 aa16.34■□□□□ 0.21
TM2D3-214ENST00000561356 PEG3Q9GZU2 1588 aa16.3■□□□□ 0.2
TM2D3-214ENST00000561356 ZNF608Q9ULD9 1512 aaPredicted RBP16.28■□□□□ 0.2
TM2D3-214ENST00000561356 URB2Q14146 1524 aaKnown RBP16.25■□□□□ 0.19
TM2D3-214ENST00000561356 CHD1O14646 1710 aa16.23■□□□□ 0.19
TM2D3-214ENST00000561356 RSF1Q96T23 1441 aaPredicted RBP16.23■□□□□ 0.19
TM2D3-214ENST00000561356 FANCD2Q9BXW9 1451 aa16.22■□□□□ 0.19
TM2D3-214ENST00000561356 KDM4FA0A1W2PPD8 638 aa16.15■□□□□ 0.18
TM2D3-214ENST00000561356 EIF4G3O43432 1585 aaKnown RBP16.11■□□□□ 0.17
TM2D3-214ENST00000561356 IFT140Q96RY7 1462 aa16.04■□□□□ 0.16
TM2D3-214ENST00000561356 CLASP1Q7Z460 1538 aa16.02■□□□□ 0.15
TM2D3-214ENST00000561356 MROH2BQ7Z745 1585 aa16■□□□□ 0.15
TM2D3-214ENST00000561356 ERCC6L2Q5T890 1561 aa15.97■□□□□ 0.15
TM2D3-214ENST00000561356 CFTRP13569 1480 aa15.96■□□□□ 0.14
TM2D3-214ENST00000561356 LMTK3Q96Q04 1460 aa15.96■□□□□ 0.14
TM2D3-214ENST00000561356 KIF13AQ9H1H9 1805 aa15.95■□□□□ 0.14
TM2D3-214ENST00000561356 HECW2Q9P2P5 1572 aa15.95■□□□□ 0.14
TM2D3-214ENST00000561356 FBLN2P98095 1184 aa15.91■□□□□ 0.14
TM2D3-214ENST00000561356 FBXO41Q8TF61 875 aa15.91■□□□□ 0.14
TM2D3-214ENST00000561356 AQRO60306 1485 aaKnown RBP eCLIP15.91■□□□□ 0.142e-6■■■■■ 26.9
TM2D3-214ENST00000561356 GAPVD1Q14C86 1478 aa15.88■□□□□ 0.13
TM2D3-214ENST00000561356 ILDR2Q71H61 639 aa15.86■□□□□ 0.13
TM2D3-214ENST00000561356 SOCS7O14512 581 aa15.84■□□□□ 0.13
TM2D3-214ENST00000561356 TARBP1Q13395 1621 aaKnown RBP15.81■□□□□ 0.12
TM2D3-214ENST00000561356 TOPBP1Q92547 1522 aa15.8■□□□□ 0.12
TM2D3-214ENST00000561356 SYNJ1O43426 1573 aa15.76■□□□□ 0.11
TM2D3-214ENST00000561356 WIZO95785 1651 aa15.76■□□□□ 0.11
TM2D3-214ENST00000561356 ADGRL1O94910 1474 aa15.71■□□□□ 0.11
TM2D3-214ENST00000561356 PRDM2Q13029 1718 aa15.71■□□□□ 0.11
TM2D3-214ENST00000561356 KDM6BO15054 1643 aa15.71■□□□□ 0.11
TM2D3-214ENST00000561356 SNAPC4Q5SXM2 1469 aa15.71■□□□□ 0.1
TM2D3-214ENST00000561356 SYNJ2O15056 1496 aa15.69■□□□□ 0.1
TM2D3-214ENST00000561356 DNMBPQ6XZF7 1577 aa15.62■□□□□ 0.09
TM2D3-214ENST00000561356 POLA1P09884 1462 aaPredicted RBP15.58■□□□□ 0.08
TM2D3-214ENST00000561356 ABCC10Q5T3U5 1492 aa15.58■□□□□ 0.08
TM2D3-214ENST00000561356 DIP2BQ9P265 1576 aa15.58■□□□□ 0.08
TM2D3-214ENST00000561356 TDRD9Q8NDG6 1382 aaKnown RBP15.57■□□□□ 0.08
TM2D3-214ENST00000561356 DISP3Q9P2K9 1392 aa15.57■□□□□ 0.08
TM2D3-214ENST00000561356 CHMP7Q8WUX9 453 aaPredicted RBP15.56■□□□□ 0.08
TM2D3-214ENST00000561356 RAD54L2Q9Y4B4 1467 aa15.56■□□□□ 0.08
TM2D3-214ENST00000561356 MAGI1Q96QZ7 1491 aaPredicted RBP15.54■□□□□ 0.08
TM2D3-214ENST00000561356 FAM69CQ0P6D2 419 aa15.54■□□□□ 0.08
TM2D3-214ENST00000561356 ABCC8Q09428 1581 aa15.51■□□□□ 0.07
TM2D3-214ENST00000561356 TSPOAP1O95153 1857 aa15.5■□□□□ 0.07
TM2D3-214ENST00000561356 CEP170Q5SW79 1584 aa15.49■□□□□ 0.07
TM2D3-214ENST00000561356 MAPKBP1O60336 1514 aa15.43■□□□□ 0.06
TM2D3-214ENST00000561356 WDR97A6NE52 1622 aa15.42■□□□□ 0.06
TM2D3-214ENST00000561356 TOP2AP11388 1531 aaKnown RBP15.41■□□□□ 0.06
TM2D3-214ENST00000561356 SPATA31D1Q6ZQQ2 1576 aa15.41■□□□□ 0.06
TM2D3-214ENST00000561356 GRIN2BQ13224 1484 aa15.4■□□□□ 0.06
TM2D3-214ENST00000561356 SHROOM2Q13796 1616 aa15.39■□□□□ 0.05
TM2D3-214ENST00000561356 SOGA1O94964 1423 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms