RNA–Protein interactions for RNA: ENST00000560318.1

NUSAP1-211, Transcript of nucleolar and spindle associated protein 1, humanhuman

TSL 5

Gene NUSAP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUSAP1-211ENST00000560318 AEBP2Q6ZN18 517 aaPredicted RBP34.71■■■■□ 3.15
NUSAP1-211ENST00000560318 CHIC1Q5VXU3 224 aa32.73■■■□□ 2.83
NUSAP1-211ENST00000560318 NISCHQ9Y2I1 1504 aa32.11■■■□□ 2.73
NUSAP1-211ENST00000560318 SENP3Q9H4L4 574 aaPredicted RBP29.6■■■□□ 2.33
NUSAP1-211ENST00000560318 PHF23Q9BUL5 403 aaPredicted RBP29.22■■■□□ 2.27
NUSAP1-211ENST00000560318 CCDC180Q9P1Z9 1646 aa28.49■■■□□ 2.15
NUSAP1-211ENST00000560318 ABCC9O60706 1549 aa28.02■■■□□ 2.08
NUSAP1-211ENST00000560318 FOXD1Q16676 465 aa27.64■■■□□ 2.02
NUSAP1-211ENST00000560318 DCAF8L2P0C7V8 631 aa27.01■■□□□ 1.91
NUSAP1-211ENST00000560318 RB1CC1Q8TDY2 1594 aa26.88■■□□□ 1.89
NUSAP1-211ENST00000560318 NACADO15069 1562 aa26.84■■□□□ 1.89
NUSAP1-211ENST00000560318 ZCCHC6Q5VYS8 1495 aaKnown RBP26.71■■□□□ 1.87
NUSAP1-211ENST00000560318 MYO15BQ96JP2 1530 aa26.64■■□□□ 1.85
NUSAP1-211ENST00000560318 DCAF1Q9Y4B6 1507 aa26.52■■□□□ 1.84
NUSAP1-211ENST00000560318 PABPN1Q86U42 306 aaKnown RBP eCLIP26.24■■□□□ 1.79
NUSAP1-211ENST00000560318 UNC13AQ9UPW8 1703 aa26.24■■□□□ 1.79
NUSAP1-211ENST00000560318 SCRIBQ14160 1630 aa26.06■■□□□ 1.76
NUSAP1-211ENST00000560318 BICRAQ9NZM4 1560 aa26.06■■□□□ 1.76
NUSAP1-211ENST00000560318 PLPPR3Q6T4P5 718 aa26.05■■□□□ 1.76
NUSAP1-211ENST00000560318 MSH5O43196 834 aa25.92■■□□□ 1.74
NUSAP1-211ENST00000560318 DNAJC5BQ9UF47 199 aa25.79■■□□□ 1.72
NUSAP1-211ENST00000560318 PIAS4Q8N2W9 510 aaPredicted RBP25.77■■□□□ 1.72
NUSAP1-211ENST00000560318 SHROOM4Q9ULL8 1493 aa25.72■■□□□ 1.71
NUSAP1-211ENST00000560318 PPP6R1Q9UPN7 881 aa25.72■■□□□ 1.71
NUSAP1-211ENST00000560318 POTEDQ86YR6 584 aa25.68■■□□□ 1.7
NUSAP1-211ENST00000560318 ADRA2BP18089 450 aa25.62■■□□□ 1.69
NUSAP1-211ENST00000560318 EIF4G1Q04637 1599 aaKnown RBP25.38■■□□□ 1.65
NUSAP1-211ENST00000560318 CC2D2AQ9P2K1 1620 aa25.3■■□□□ 1.64
NUSAP1-211ENST00000560318 CECR2Q9BXF3 1484 aa25.15■■□□□ 1.62
NUSAP1-211ENST00000560318 SMARCA4P51532 1647 aa24.9■■□□□ 1.58
NUSAP1-211ENST00000560318 BAZ1AQ9NRL2 1556 aaPredicted RBP24.88■■□□□ 1.57
NUSAP1-211ENST00000560318 ATAD2BQ9ULI0 1458 aa24.81■■□□□ 1.56
NUSAP1-211ENST00000560318 NCAPD3P42695 1498 aa24.79■■□□□ 1.56
NUSAP1-211ENST00000560318 MROH2BQ7Z745 1585 aa24.76■■□□□ 1.55
NUSAP1-211ENST00000560318 SMARCA2P51531 1590 aa24.74■■□□□ 1.55
NUSAP1-211ENST00000560318 PEG3Q9GZU2 1588 aa24.63■■□□□ 1.53
NUSAP1-211ENST00000560318 HMGXB3Q12766 1538 aa24.61■■□□□ 1.53
NUSAP1-211ENST00000560318 BAZ1BQ9UIG0 1483 aaKnown RBP24.6■■□□□ 1.53
NUSAP1-211ENST00000560318 WIZO95785 1651 aa24.5■■□□□ 1.51
NUSAP1-211ENST00000560318 RSF1Q96T23 1441 aaPredicted RBP24.48■■□□□ 1.51
NUSAP1-211ENST00000560318 NESP48681 1621 aa24.23■■□□□ 1.47
NUSAP1-211ENST00000560318 TOP2AP11388 1531 aaKnown RBP24.2■■□□□ 1.46
NUSAP1-211ENST00000560318 ERCC6Q03468 1493 aa24.13■■□□□ 1.45
NUSAP1-211ENST00000560318 LAMC3Q9Y6N6 1575 aa24.12■■□□□ 1.45
NUSAP1-211ENST00000560318 CADPSQ9ULU8 1353 aa24.1■■□□□ 1.45
NUSAP1-211ENST00000560318 PDS5BQ9NTI5 1447 aa24■■□□□ 1.43
NUSAP1-211ENST00000560318 CCDC88BA6NC98 1476 aa23.97■■□□□ 1.43
NUSAP1-211ENST00000560318 SUPT5HO00267 1087 aaKnown RBP23.95■■□□□ 1.42
NUSAP1-211ENST00000560318 CFTRP13569 1480 aa23.92■■□□□ 1.42
NUSAP1-211ENST00000560318 KIF21AQ7Z4S6 1674 aa23.88■■□□□ 1.41
NUSAP1-211ENST00000560318 CUX2O14529 1486 aa23.85■■□□□ 1.41
NUSAP1-211ENST00000560318 FANCD2Q9BXW9 1451 aa23.8■■□□□ 1.4
NUSAP1-211ENST00000560318 THOC2Q8NI27 1593 aaKnown RBP23.79■■□□□ 1.4
NUSAP1-211ENST00000560318 CEP164Q9UPV0 1460 aa23.76■■□□□ 1.39
NUSAP1-211ENST00000560318 MRC2Q9UBG0 1479 aa23.73■■□□□ 1.39
NUSAP1-211ENST00000560318 PRDM2Q13029 1718 aa23.66■■□□□ 1.38
NUSAP1-211ENST00000560318 WDR62O43379 1518 aa23.63■■□□□ 1.37
NUSAP1-211ENST00000560318 MAPK8IP2Q13387 824 aaPredicted RBP23.61■■□□□ 1.37
NUSAP1-211ENST00000560318 URB2Q14146 1524 aaKnown RBP23.55■■□□□ 1.36
NUSAP1-211ENST00000560318 DMRT2Q9Y5R5 561 aa23.45■■□□□ 1.34
NUSAP1-211ENST00000560318 TOPBP1Q92547 1522 aa23.41■■□□□ 1.34
NUSAP1-211ENST00000560318 ABCC8Q09428 1581 aa23.4■■□□□ 1.34
NUSAP1-211ENST00000560318 SCAF1Q9H7N4 1312 aaKnown RBP23.39■■□□□ 1.34
NUSAP1-211ENST00000560318 DNMBPQ6XZF7 1577 aa23.35■■□□□ 1.33
NUSAP1-211ENST00000560318 IFT140Q96RY7 1462 aa23.26■■□□□ 1.31
NUSAP1-211ENST00000560318 DNAJC5Q9H3Z4 198 aa23.23■■□□□ 1.31
NUSAP1-211ENST00000560318 CUX1P39880 1505 aa23.22■■□□□ 1.31
NUSAP1-211ENST00000560318 POLA1P09884 1462 aaPredicted RBP23.2■■□□□ 1.3
NUSAP1-211ENST00000560318 ZNF608Q9ULD9 1512 aaPredicted RBP23.18■■□□□ 1.3
NUSAP1-211ENST00000560318 SOGA1O94964 1423 aa23.16■■□□□ 1.3
NUSAP1-211ENST00000560318 FGD5Q6ZNL6 1462 aa23.16■■□□□ 1.3
NUSAP1-211ENST00000560318 RAD54L2Q9Y4B4 1467 aa23.15■■□□□ 1.3
NUSAP1-211ENST00000560318 TARBP1Q13395 1621 aaKnown RBP23.12■■□□□ 1.29
NUSAP1-211ENST00000560318 WRNQ14191 1432 aaPredicted RBP eCLIP23.08■■□□□ 1.29
NUSAP1-211ENST00000560318 AQRO60306 1485 aaKnown RBP eCLIP23.08■■□□□ 1.293e-7■■■■■ 31.8
NUSAP1-211ENST00000560318 TDRD9Q8NDG6 1382 aaKnown RBP23.04■■□□□ 1.28
NUSAP1-211ENST00000560318 EIF4G3O43432 1585 aaKnown RBP23.04■■□□□ 1.28
NUSAP1-211ENST00000560318 SYNJ1O43426 1573 aa23■■□□□ 1.27
NUSAP1-211ENST00000560318 TOP2BQ02880 1626 aa22.99■■□□□ 1.27
NUSAP1-211ENST00000560318 BIVM-ERCC5R4GMW8 1640 aa22.97■■□□□ 1.27
NUSAP1-211ENST00000560318 OSCARQ8IYS5 282 aa22.96■■□□□ 1.27
NUSAP1-211ENST00000560318 ABCA10Q8WWZ4 1543 aa22.92■■□□□ 1.26
NUSAP1-211ENST00000560318 WDR97A6NE52 1622 aa22.9■■□□□ 1.26
NUSAP1-211ENST00000560318 FBLN2P98095 1184 aa22.87■■□□□ 1.25
NUSAP1-211ENST00000560318 GAPVD1Q14C86 1478 aa22.86■■□□□ 1.25
NUSAP1-211ENST00000560318 GRIN2BQ13224 1484 aa22.85■■□□□ 1.25
NUSAP1-211ENST00000560318 PPP4R3CPQ6ZMV5 832 aa22.83■■□□□ 1.25
NUSAP1-211ENST00000560318 SNAPC4Q5SXM2 1469 aa22.83■■□□□ 1.25
NUSAP1-211ENST00000560318 ABCA5Q8WWZ7 1642 aa22.79■■□□□ 1.24
NUSAP1-211ENST00000560318 CHMP7Q8WUX9 453 aaPredicted RBP22.78■■□□□ 1.24
NUSAP1-211ENST00000560318 MAGI1Q96QZ7 1491 aaPredicted RBP22.78■■□□□ 1.24
NUSAP1-211ENST00000560318 PBRM1Q86U86 1689 aa22.76■■□□□ 1.23
NUSAP1-211ENST00000560318 CHD1O14646 1710 aa22.76■■□□□ 1.23
NUSAP1-211ENST00000560318 SYNJ2O15056 1496 aa22.7■■□□□ 1.22
NUSAP1-211ENST00000560318 ERICH3Q5RHP9 1530 aa22.63■■□□□ 1.21
NUSAP1-211ENST00000560318 KIF27Q86VH2 1401 aa22.61■■□□□ 1.21
NUSAP1-211ENST00000560318 TRIM41Q8WV44 630 aa22.61■■□□□ 1.21
NUSAP1-211ENST00000560318 FHAD1B1AJZ9 1412 aa22.59■■□□□ 1.21
NUSAP1-211ENST00000560318 ADAMTS12P58397 1594 aa22.59■■□□□ 1.21
NUSAP1-211ENST00000560318 IGF1RP08069 1367 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms